Ss1.1-Pig4-TMW8027N20.5
|
CGCGCCGCGGCTCGAGTAGCCACCAGCCTACACCAGAGCCACAGCAACACGGGATCCGAG
CCGCGTCTGCAACCTACACCACAGCTCACGGCAACGCCGGATCGTCAACCCACTGAGCAA
GGGCAGGGACCGAACCCGCAACCTCATGGTTCCTAGGCGGATTCATTAACCACTGCGCCA
CGACGGGAACTCCCTTTAATGTTCTTAAATACAAAAAAAAAAAAAATATTTATTAGAGCT
TTCCTATTTTTTAAAGAGCCTTGCCTATCTAAATTAGTCAAAAGATTTCAGCATTTCACC
TAACATACTGACTGTCGGAGCCACTTTTCAATTTACCGAAGACCACCTCTTTGTTAAATC
TAATGAAAAATCTTTAGGCTTGGTTTTCCTCGACTTCTGGGCCACATGTGAAGTCACTCA
TACATTACTTCTTAAAGTTTTCTTCTCTGCTGTTGTGGTCTCTTATTCTAACCATTTTAT
ATTTGATGGGAGCTAAAGAGTTTTAAACAACAGAAATGTACCAGTCTGATGTTTCTAAGA
ACATTTTATTAAGAAAGTTGTAGACCAGGGCTAGATGAGATGATTTGTGGAAATAAGAAT
TAGATGCCTTCTTTTGACAGTCTGTTTGTAAAAAATAAAATTTACTGAAACGTTTTTATG
TTCCTATGAAACATTAACTAAGTCACACCATAAATTATTCTCCTGAAGATCAAATAATTT
ATTTGAGAAAGTCTAACACAGGTATCTAGTCAATCAAATGTTCACCAAGCATTTTTACTG
AACTAGGCCATTTTGTTCTCTGGAGATTTTTTTTTTTTTTTGATTGTTACTTTTTTTTGT
TTTATTATTTTC------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
GAATGGCAACATTCCTCACAGAACTTACAACAGAGGCTAAAGCTAACTTAAGATGAACCT
AAGAATACTGCTATGAAGGGAGAAATAAAGTGTGCTGGGAAACTCTCAGGAGGAACACTT
ACCACATAGAGGAGTTAACCAGGTAGGCTTCCTGTAGGAAGCGACCTGACATTAAGCTGA
AATTTGATAGATTGGAGGACTAGCCAGAAAAAAAAT
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
CGCGCCGCGGCTCGAGTAGCCACCAGCCTACACCAGAGCCACAGCAACACGGGATCCGAG
CCGCGTCTGCAACCTACACCACAGCTCACGGCAACGCCGGATCGTCAACCCACTGAGCAA
GGGCAGGGACCGAACCCGCAACCTCATGGTTCCTAGGCGGATTCATTAACCACTGCGCCA
CGACGGGAACTCCCTTTAATGTTCTTAAATACAAAAAAAAAAAAAATATTTATTAGAGCT
TTCCTATTTTTTAAAGAGCCTTGCCTATCTAAATTAGTCAAAAGATTTCAGCATTTCACC
TAACATACTGACTGTCGGAGCCACTTTTCAATTTACCGAAGACCACCTCTTTGTTAAATC
TAATGAAAAATCTTTAGGCTTGGTTTTCCTCGACTTCTGGGCCACATGTGAAGTCACTCA
TACATTACTTCTTAAAGTTTTCTTCTCTGCTGTTGTGGTCTCTTATTCTAACCATTTTAT
ATTTGATGGGAGCTAAAGAGTTTTAAACAACAGAAATGTACCAGTCTGATGTTTCTAAGA
ACATTTTATTAAGAAAGTTGTAGACCAGGGCTAGATGAGATGATTTGTGGAAATAAGAAT
TAGATGCCTTCTTTTGACAGTCTGTTTGTAAAAAATAAAATTTACTGAAACGTTTTTATG
TTCCTATGAAACATTAACTAAGTCACACCATAAATTATTCTCCTGAAGATCAAATAATTT
ATTTGAGAAAGTCTAACACAGGTATCTAGTCAATCAAATGTTCACCAAGCATTTTTACTG
AACTAGGCCATTTTGTTCTCTGGAGATTTTTTTTTTTTTTTGATTGTTACTTTTTTTTGT
TTTATTATTTTC------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
GAATGGCAACATTCCTCACAGAACTTACAACAGAGGCTAAAGCTAACTTAAGATGAACCT
AAGAATACTGCTATGAAGGGAGAAATAAAGTGTGCTGGGAAACTCTCAGGAGGAACACTT
ACCACATAGAGGAGTTAACCAGGTAGGCTTCCTGTAGGAAGCGACCTGACATTAAGCTGA
AATTTGATAGATTGGAGGACTAGCCAGAAAAAAAAT
|
|
328-488, gnl|bosTau2|chr14 (18089252-18089090) |
|
328-488, gnl|Hg17|chr8 (68116004-68116478) |
| |
|
607-807, gnl|bosTau2|chr14 (18086500-18086701) |
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607-807, gnl|canFam2|chr29 (19563808-19564024) |
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607-807, gnl|dasNov1|scaffold_41306 (17588-17799) |
|
607-807, gnl|echTel1|scaffold_23996 (1114-1334) |
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607-807, gnl|hg17|chr8 (68117384-68117617) |
|
607-807, gnl|Hg17|chr8 (68117686-68117462) |
|
607-807, gnl|loxAfr1|scaffold_34745 (7520-7289) |
|
607-807, gnl|mm7|chr1 (10167062-10167225) |
|
607-807, gnl|monDom2|scaffold_4 (94456021-94455800) |
|
607-807, gnl|panTro1|chr7 (70141716-70141949) |
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607-807, gnl|rheMac2|chr8 (69670279-69670512) |
|
607-807, gnl|rn3|chr5 (8727808-8727610) |
| |
|
953-1067, gnl|bosTau2|chr14 (18088631-18088740) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
328-488, gnl|bosTau2|chr14 (18089252-18089090) |
|
328-488, gnl|Hg17|chr8 (68116004-68116478) |
| |
|
607-807, gnl|bosTau2|chr14 (18086500-18086701) |
|
607-807, gnl|canFam2|chr29 (19563808-19564024) |
|
607-807, gnl|dasNov1|scaffold_41306 (17588-17799) |
|
607-807, gnl|echTel1|scaffold_23996 (1114-1334) |
|
607-807, gnl|hg17|chr8 (68117384-68117617) |
|
607-807, gnl|Hg17|chr8 (68117686-68117462) |
|
607-807, gnl|loxAfr1|scaffold_34745 (7520-7289) |
|
607-807, gnl|mm7|chr1 (10167062-10167225) |
|
607-807, gnl|monDom2|scaffold_4 (94456021-94455800) |
|
607-807, gnl|panTro1|chr7 (70141716-70141949) |
|
607-807, gnl|rheMac2|chr8 (69670279-69670512) |
|
607-807, gnl|rn3|chr5 (8727808-8727610) |
| |
|
953-1067, gnl|bosTau2|chr14 (18088631-18088740) |
