Ss1.1-Pig4-TMW8028C06.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| AGAAACAAACTGTGAGAGTGATCGGGAGAGGGGTAGTAAGCAGGCCTGCAGCCCATGCTC TTCACAGTCCACCAGCAGTGGCATTTGCACAGACTTCTGGGACTTATATAAAACTGGACA ACATGAATGTCAGCCGGAAAGGCAAGAACTCCGTGAAGTCAGTGCCAGTGAGCGCTGGTG GTGAGGGGGAAACCTCCCCCTACAGCCTTGAGGCCTCTCCATTGGGGCAGCTCATGAACA TGTTGTCACACCCAGTCATCCGCCGGAGCTCTCTCTTAACCGAGAAACTCCTCAGACTCC TTTCTCTCATCTCAATTGCTCTCCCAGAAAACAAAGTGTCGGAAGCACAGGCTAATTCTG GCAGCAGTGCTTCTTCCACCACTGTTGCCACCTCAACCACATCTACTACCACTACCACTG CTGCCTCCAGCACGCCCACTCCCCCTGCTGCAACCACCCCTGTCACTTCTGCTCCAGCCC TGGTTGCTGCCACGGCTATATCCACCATTGCCGTAGCCGCTTCGACCACAGTGACTACCC CCACGACTGCTACCACTACTGTTTCAACTTCTACTACTAAGGCCAGCAAATCTCCAGCAA AGGTGGGTGATATGGGTAGCAGCAGCACAGACTTTAAAATGGTATCCTCTGGCCTCACTG AAAACCAGCTCCAGCTCTCTGTGGAGGTGTTGACATCCCACTCTTGTTCTGAAGAGGGCC TAGAAGATGCAGCCAATGTATTACTGCAGCTCTCTCGGGGGGACCCTGGAACCCGGGACA CTGTTTTGAAGCTGCTACTAAATGGAGCCCGCCATCTGGGTTATACCCTTTGCAAACAGA TAGGAACCCTTCTGGCTGAGCTACGGGAATACAATCTGGAACAGCAGCGGCGAGCCCAGT GTGAGACCCTCTCTCCTGATGGCTTGCCTGAGGAGCAGCCACAGACCACCAAGTTGAAAG GCAAAATGCAGAGCAGGTTTGACATGGCTGAGAATGTGGTAATCGTGGCATCTCAGAAGC GACCTTTGGGTGGTCGGGAGCTCCAGCTGCCTTCTATGTCCATGTTGACATCCAAGACAT CTACTCAGAAGTTCTTCTTGAGGGTACTGCANGTCA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| AGAAACAAACTGTGAGAGTGATCGGGAGAGGGGTAGTAAGCAGGCCTGCAGCCCATGCTC TTCACAGTCCACCAGCAGTGGCATTTGCACAGACTTCTGGGACTTATATAAAACTGGACA ACATGAATGTCAGCCGGAAAGGCAAGAACTCCGTGAAGTCAGTGCCAGTGAGCGCTGGTG GTGAGGGGGAAACCTCCCCCTACAGCCTTGAGGCCTCTCCATTGGGGCAGCTCATGAACA TGTTGTCACACCCAGTCATCCGCCGGAGCTCTCTCTTAACCGAGAAACTCCTCAGACTCC TTTCTCTCATCTCAATTGCTCTCCCAGAAAACAAAGTGTCGGAAGCACAGGCTAATTCTG GCAGCAGTGCTTCTTCCACCACTGTTGCCACCTCAACCACATCTACTACCACTACCACTG CTGCCTCCAGCACGCCCACTCCCCCTGCTGCAACCACCCCTGTCACTTCTGCTCCAGCCC TGGTTGCTGCCACGGCTATATCCACCATTGCCGTAGCCGCTTCGACCACAGTGACTACCC CCACGACTGCTACCACTACTGTTTCAACTTCTACTACTAAGGCCAGCAAATCTCCAGCAA AGGTGGGTGATATGGGTAGCAGCAGCACAGACTTTAAAATGGTATCCTCTGGCCTCACTG AAAACCAGCTCCAGCTCTCTGTGGAGGTGTTGACATCCCACTCTTGTTCTGAAGAGGGCC TAGAAGATGCAGCCAATGTATTACTGCAGCTCTCTCGGGGGGACCCTGGAACCCGGGACA CTGTTTTGAAGCTGCTACTAAATGGAGCCCGCCATCTGGGTTATACCCTTTGCAAACAGA TAGGAACCCTTCTGGCTGAGCTACGGGAATACAATCTGGAACAGCAGCGGCGAGCCCAGT GTGAGACCCTCTCTCCTGATGGCTTGCCTGAGGAGCAGCCACAGACCACCAAGTTGAAAG GCAAAATGCAGAGCAGGTTTGACATGGCTGAGAATGTGGTAATCGTGGCATCTCAGAAGC GACCTTTGGGTGGTCGGGAGCTCCAGCTGCCTTCTATGTCCATGTTGACATCCAAGACAT CTACTCAGAAGTTCTTCTTGAGGGTACTGCANGTCA |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 2 entry(ies) | More info |
| Predicted RNA structure(s): 2 entry(ies) | Help | Less info |
| 80-567, - strand, RNAz p=0.979137 | |
| 999-1116, + strand, RNAz p=0.879535 |
| Predicted RNA structure(s): 2 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 80-567, - strand, RNAz p=0.979137 | |
| 999-1116, + strand, RNAz p=0.879535 |
| Aligned organism(s): 23 entry(ies) | More info |
| Aligned organism(s): 23 entry(ies) | Help | Less info |
| 1-567, gnl|bosTau2|chrX (26917606-26917041) | |
| 1-567, gnl|Hg17|chrX (53458220-53457655) | |
| 1-567, gnl|Mm7|chrX (146678286-146678860) | |
| 685-844, gnl|bosTau2|chrX (26915945-26915786) | |
| 685-844, gnl|canFam2|chrX (45216053-45216207) | |
| 685-844, gnl|danRer3|chr23 (39400921-39400772) | |
| 685-844, gnl|dasNov1|scaffold_2778 (7005-7159) | |
| 685-844, gnl|echTel1|scaffold_320780 (37291-37143) | |
| 685-844, gnl|fr1|chrUn (19851799-19851658) | |
| 685-844, gnl|hg17|chrX (53456395-53456549) | |
| 685-844, gnl|Hg17|chrX (53456576-53456417) | |
| 685-844, gnl|loxAfr1|scaffold_14194 (30139-30293) | |
| 685-844, gnl|mm7|chrX (146680110-146679964) | |
| 685-844, gnl|Mm7|chrX (146679935-146680094) | |
| 685-844, gnl|monDom2|scaffold_255 (26263-26406) | |
| 685-844, gnl|panTro1|chrX (54705283-54705437) | |
| 685-844, gnl|rheMac2|chrX (51862409-51862563) | |
| 685-844, gnl|rn3|chrX (41439071-41438920) | |
| 685-844, gnl|tetNig1|chr9 (3594836-3594702) | |
| 685-844, gnl|xenTro1|scaffold_750 (526812-526987) | |
| 974-1116, gnl|bosTau2|chrX (26914182-26914040) | |
| 974-1116, gnl|Hg17|chrX (53454747-53454605) | |
| 974-1116, gnl|Mm7|chrX (146681368-146681510) |
| Aligned organism(s): 23 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-567, gnl|bosTau2|chrX (26917606-26917041) | |
| 1-567, gnl|Hg17|chrX (53458220-53457655) | |
| 1-567, gnl|Mm7|chrX (146678286-146678860) | |
| 685-844, gnl|bosTau2|chrX (26915945-26915786) | |
| 685-844, gnl|canFam2|chrX (45216053-45216207) | |
| 685-844, gnl|danRer3|chr23 (39400921-39400772) | |
| 685-844, gnl|dasNov1|scaffold_2778 (7005-7159) | |
| 685-844, gnl|echTel1|scaffold_320780 (37291-37143) | |
| 685-844, gnl|fr1|chrUn (19851799-19851658) | |
| 685-844, gnl|hg17|chrX (53456395-53456549) | |
| 685-844, gnl|Hg17|chrX (53456576-53456417) | |
| 685-844, gnl|loxAfr1|scaffold_14194 (30139-30293) | |
| 685-844, gnl|mm7|chrX (146680110-146679964) | |
| 685-844, gnl|Mm7|chrX (146679935-146680094) | |
| 685-844, gnl|monDom2|scaffold_255 (26263-26406) | |
| 685-844, gnl|panTro1|chrX (54705283-54705437) | |
| 685-844, gnl|rheMac2|chrX (51862409-51862563) | |
| 685-844, gnl|rn3|chrX (41439071-41438920) | |
| 685-844, gnl|tetNig1|chr9 (3594836-3594702) | |
| 685-844, gnl|xenTro1|scaffold_750 (526812-526987) | |
| 974-1116, gnl|bosTau2|chrX (26914182-26914040) | |
| 974-1116, gnl|Hg17|chrX (53454747-53454605) | |
| 974-1116, gnl|Mm7|chrX (146681368-146681510) |