Non-Coding RNA Search

Ss1.1-Pig4-TMW8028J21.3

Sequence:


               
               CTGGCGTGGTAGTCTTCCTTGCATCTTCTTGTCTCAGCTCGAGAAAATTGTGGTTTCTGC
GATGAGTTCCCAGAAAGGGAACGTGGCTCGTTCCAGGCCTCAGAGGCACCAGAATACCTT
TAGCTTCAAAAATGACAAGTTTGATAAGAGTGTTCAGACCAAGAAAATTAATGCAAAACT
TCATGATGGTGTATGTCAACACTGTAAAGAAGTTCTTGAATGGCGTGTAAAATACAGCAA
GTACAAACCATTATCAAAGCCGAAAAAATGGTAAGTTAAATTTCTTAATTACTTTACCAG
TAATACCAGTATCATAGTTTATTACTTTACTCCCTGATTTCAGAATTATGTCCAGATAAA
TATTAAGGTGAATAGAGAAAAAAAATTTCCATTATCCTATGTAGAACAGAATTTCATCTT
ACATTCTGAATCTTGGCTTGTGAAGGCAAATAGATTGGAAAGGCGGATTCATCATTTCCT
TCCCCATTCTTTCATAAATAAAGAATGTAGCATTTTTATTGCATCTTGTTCATAAAACAA
GATTAGGGTTAAGGCAGAGAAGGGAAAGTTTGTTTTGCAAAGTTCTGTCTCTGACTGATG
AGGTTACAATATTTACTATATATTATTTTTTACCAAAAGGGTCTTAAAGAGGGTCTGACC
TTTTACTTTGACCCATGAAGTTTACTGAAATGGCTTAGATTAGGTATCGTAAATAAATCA
CTAGATTGATAATGTATAACTTCATTCCTCTGAGGTTTTGAGTCTAGTGAAAAGATACTG
GACTTTGTTTCTCATCTGTCCCTTACCATTCTATAATTTTGGGATTCTGTTTCATCAGCC
TTATGTACCTCCTGGGACTGCTCCCTTACCTCCTTTGGCTTATCTCAGTAAGGATCATAT
CAGAGAGTAATTGACGCCGGAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTGGCGTGGTAGTCTTCCTTGCATCTTCTTGTCTCAGCTCGAGAAAATTGTGGTTTCTGC
GATGAGTTCCCAGAAAGGGAACGTGGCTCGTTCCAGGCCTCAGAGGCACCAGAATACCTT
TAGCTTCAAAAATGACAAGTTTGATAAGAGTGTTCAGACCAAGAAAATTAATGCAAAACT
TCATGATGGTGTATGTCAACACTGTAAAGAAGTTCTTGAATGGCGTGTAAAATACAGCAA
GTACAAACCATTATCAAAGCCGAAAAAATGGTAAGTTAAATTTCTTAATTACTTTACCAG
TAATACCAGTATCATAGTTTATTACTTTACTCCCTGATTTCAGAATTATGTCCAGATAAA
TATTAAGGTGAATAGAGAAAAAAAATTTCCATTATCCTATGTAGAACAGAATTTCATCTT
ACATTCTGAATCTTGGCTTGTGAAGGCAAATAGATTGGAAAGGCGGATTCATCATTTCCT
TCCCCATTCTTTCATAAATAAAGAATGTAGCATTTTTATTGCATCTTGTTCATAAAACAA
GATTAGGGTTAAGGCAGAGAAGGGAAAGTTTGTTTTGCAAAGTTCTGTCTCTGACTGATG
AGGTTACAATATTTACTATATATTATTTTTTACCAAAAGGGTCTTAAAGAGGGTCTGACC
TTTTACTTTGACCCATGAAGTTTACTGAAATGGCTTAGATTAGGTATCGTAAATAAATCA
CTAGATTGATAATGTATAACTTCATTCCTCTGAGGTTTTGAGTCTAGTGAAAAGATACTG
GACTTTGTTTCTCATCTGTCCCTTACCATTCTATAATTTTGGGATTCTGTTTCATCAGCC
TTATGTACCTCCTGGGACTGCTCCCTTACCTCCTTTGGCTTATCTCAGTAAGGATCATAT
CAGAGAGTAATTGACGCCGGAAAA

Coded protein: 1 entry(ies)

More info

Coded protein: 1 entry(ies)

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               gi|38327630|ref|NP_938404.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|38327630|ref|NP_938404.1|

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               26-243, gnl|bosTau2|chr1 (1211102-1211320)
               

               
               26-243, gnl|Hg17|chr2 (54623535-54623749)
               

               
               26-243, gnl|Mm7|chr3 (105861747-105861538)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               26-243, gnl|bosTau2|chr1 (1211102-1211320)
               

               
               26-243, gnl|Hg17|chr2 (54623535-54623749)
               

               
               26-243, gnl|Mm7|chr3 (105861747-105861538)

	26-243, gnl\|bosTau2\|chr1 (1211102-1211320)
	26-243, gnl\|Hg17\|chr2 (54623535-54623749)
	26-243, gnl\|Mm7\|chr3 (105861747-105861538)