Non-Coding RNA Search

Ss1.1-Pig4-TMW8029A04.5

Sequence:


               
               CCGCGGGCGGGGTGGACAGGTAGGCGAGCGGGCAGCTGCGGCTCCGGGGAAGGCTCGGGC
TGCGGAGTCCCCTACGGTGCCGGGCGCGCCCCCCGCACCCTCGGCCTCTGGCGTTGAGGC
GGGGGAGTAAGGAGATGCCGACCCATAGAGACAGCAATACCATGTCTCACCCGATCGCAG
GCGGCGGCAGCGGGGACCATTCTCACCAGGTTCGGGTGAAAGCCTACTACCGCGGGGATA
TCATGATAACACATTTTGAACCTTCCATCTCTTTTGAAGGCCTTTGCAATGAGGTTCGAG
ACATGTGTTCTTTTGACAATGAACAGCTTTTCACCATGAAATGGATAGATGAGGAAGGAG
ACCCGTGTACAGTATCATCTCAGTTGGAGTTAGAAGAAGCCTTTAGGCTTTATGAGCTAA
ACAAGGATTCTGAACTTTTGATTCATGTATTCCCTTGTGTACCAGAACGTCCTGGAATGC
CCTGTCCAGGAGAAGATAAGTCCATCTACCGCCGAGGTGCACGCCGCTGGAGAAAGCTTT
ATTGTGCAAATGGCCACACTTTTCAAGCCAAGCGTTTCAACAGGCGTGCCCACTGTGCCA
TCTGCACTGATCGAATATGGGGCCTTGGACGTCAGGGATATAAATGCATCAATTGCAAAC
TCCTGGTTCACAAGAAGTGCCACAAACTTGTCACAATTGAATGTGGGCGACATTCTTTGC
CACCGGAACCAATGATGCCCATGGACCAGTCATCCATGCATTCAGACCATGCACAGACAG
TAATTCCATATAATCCTTCAAGTCATGAGAGTTTGGACCAAGTTGGTGAAGAAAAGGAGG
CAATGAACACCAGGGAAAGTGGCAAAGCTTCATCCAGTTTAGGGCTTCAGGATTTTGATT
TGCTCCGGGTAATAGGAAGAGGAAGTTATGCCAAAGTACTATTGGTGCGTTTAAAAAAAA
CAGATCGTATTTATGCAATGAAAGTAGTGAAAAAAGAGCTCGTTAATGATGACGAGGATA
TTGACTGGGTACAGACTGAGAAGCATGTTTTTGAGCAGGCATCCAATCATCCTTTTCTTG
TTGGGCTGCATTCTTGCTTCCAGACAGAAAGCAGATTGTTCTTTGTCATAGAGTATGTAA
ATGGAGGAGATTTAATGTTTCATATGCAGCGCCAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CCGCGGGCGGGGTGGACAGGTAGGCGAGCGGGCAGCTGCGGCTCCGGGGAAGGCTCGGGC
TGCGGAGTCCCCTACGGTGCCGGGCGCGCCCCCCGCACCCTCGGCCTCTGGCGTTGAGGC
GGGGGAGTAAGGAGATGCCGACCCATAGAGACAGCAATACCATGTCTCACCCGATCGCAG
GCGGCGGCAGCGGGGACCATTCTCACCAGGTTCGGGTGAAAGCCTACTACCGCGGGGATA
TCATGATAACACATTTTGAACCTTCCATCTCTTTTGAAGGCCTTTGCAATGAGGTTCGAG
ACATGTGTTCTTTTGACAATGAACAGCTTTTCACCATGAAATGGATAGATGAGGAAGGAG
ACCCGTGTACAGTATCATCTCAGTTGGAGTTAGAAGAAGCCTTTAGGCTTTATGAGCTAA
ACAAGGATTCTGAACTTTTGATTCATGTATTCCCTTGTGTACCAGAACGTCCTGGAATGC
CCTGTCCAGGAGAAGATAAGTCCATCTACCGCCGAGGTGCACGCCGCTGGAGAAAGCTTT
ATTGTGCAAATGGCCACACTTTTCAAGCCAAGCGTTTCAACAGGCGTGCCCACTGTGCCA
TCTGCACTGATCGAATATGGGGCCTTGGACGTCAGGGATATAAATGCATCAATTGCAAAC
TCCTGGTTCACAAGAAGTGCCACAAACTTGTCACAATTGAATGTGGGCGACATTCTTTGC
CACCGGAACCAATGATGCCCATGGACCAGTCATCCATGCATTCAGACCATGCACAGACAG
TAATTCCATATAATCCTTCAAGTCATGAGAGTTTGGACCAAGTTGGTGAAGAAAAGGAGG
CAATGAACACCAGGGAAAGTGGCAAAGCTTCATCCAGTTTAGGGCTTCAGGATTTTGATT
TGCTCCGGGTAATAGGAAGAGGAAGTTATGCCAAAGTACTATTGGTGCGTTTAAAAAAAA
CAGATCGTATTTATGCAATGAAAGTAGTGAAAAAAGAGCTCGTTAATGATGACGAGGATA
TTGACTGGGTACAGACTGAGAAGCATGTTTTTGAGCAGGCATCCAATCATCCTTTTCTTG
TTGGGCTGCATTCTTGCTTCCAGACAGAAAGCAGATTGTTCTTTGTCATAGAGTATGTAA
ATGGAGGAGATTTAATGTTTCATATGCAGCGCCAAA

Coded protein: 1 entry(ies)

More info

Coded protein: 1 entry(ies)

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               gi|34856774|ref|XP_342224.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|34856774|ref|XP_342224.1|

Aligned organism(s): 6 entry(ies)

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Aligned organism(s): 6 entry(ies)

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               1-236, gnl|bosTau2|chr1 (62784828-62784596)
               

               
               1-236, gnl|Hg17|chr3 (171423025-171423261)
               

               
               1-236, gnl|Mm7|chr3 (30807856-30808092)
               


               
               838-1017, gnl|bosTau2|chr1 (62739318-62739139)
               

               
               838-1017, gnl|Hg17|chr3 (171480715-171480894)
               

               
               838-1017, gnl|Mm7|chr3 (30849850-30850029)

Aligned organism(s): 6 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-236, gnl|bosTau2|chr1 (62784828-62784596)
               

               
               1-236, gnl|Hg17|chr3 (171423025-171423261)
               

               
               1-236, gnl|Mm7|chr3 (30807856-30808092)
               


               
               838-1017, gnl|bosTau2|chr1 (62739318-62739139)
               

               
               838-1017, gnl|Hg17|chr3 (171480715-171480894)
               

               
               838-1017, gnl|Mm7|chr3 (30849850-30850029)

	1-236, gnl\|bosTau2\|chr1 (62784828-62784596)
	1-236, gnl\|Hg17\|chr3 (171423025-171423261)
	1-236, gnl\|Mm7\|chr3 (30807856-30808092)

	838-1017, gnl\|bosTau2\|chr1 (62739318-62739139)
	838-1017, gnl\|Hg17\|chr3 (171480715-171480894)
	838-1017, gnl\|Mm7\|chr3 (30849850-30850029)