Ss1.1-Pig4-TMW8029E05.3
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CACCGGAATCGATGTCACCTCCAAGGAAGCAATTGAAAAGAAAGAACAGCGAGCCAAGCG CTTCCATTTTCGATCAGAAGTAAATCTCTCCCAAAGGAACGTTGCCTTGGACCGAGACAT GATGAAGAAAGCAATCCCCAAAGTGAGACTGGAGACCATCTACATTTGTGGCGTAGATGA GATGAGTACCCAGGACATCTTCTCCTATTTTAAAGAATATCCTCCAGCTCACATTGAGTG GTTGGATGACACCTCCTGTAATGTCGTTTGGTTGGATGAAATGACGGCCGCAAGAGCCCT TATCAATATGAGTTCTCTGCCGGCCCTGGATAAGATAAGAAGCAGGGATGCCAGTGAGGA CAAGTCATCTGAGAAAAGTAAAAAAGACAAGCAGGAAGACAGTTCAGACGATGACGAGGC TGAAGAAGGAGAAGTTGAGGATGAGAACTCCAGTGACGCAGAGTTGGACACATTGTCTCA GGTAGAAGAAGAGTCTCTGCTAAGGAATGATCTTCGCCCAGCTAACAAACTTGCTAAAGG AAATCGGTTATTCATGAGATTTGCGACGAAAGATGA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CACCGGAATCGATGTCACCTCCAAGGAAGCAATTGAAAAGAAAGAACAGCGAGCCAAGCG CTTCCATTTTCGATCAGAAGTAAATCTCTCCCAAAGGAACGTTGCCTTGGACCGAGACAT GATGAAGAAAGCAATCCCCAAAGTGAGACTGGAGACCATCTACATTTGTGGCGTAGATGA GATGAGTACCCAGGACATCTTCTCCTATTTTAAAGAATATCCTCCAGCTCACATTGAGTG GTTGGATGACACCTCCTGTAATGTCGTTTGGTTGGATGAAATGACGGCCGCAAGAGCCCT TATCAATATGAGTTCTCTGCCGGCCCTGGATAAGATAAGAAGCAGGGATGCCAGTGAGGA CAAGTCATCTGAGAAAAGTAAAAAAGACAAGCAGGAAGACAGTTCAGACGATGACGAGGC TGAAGAAGGAGAAGTTGAGGATGAGAACTCCAGTGACGCAGAGTTGGACACATTGTCTCA GGTAGAAGAAGAGTCTCTGCTAAGGAATGATCTTCGCCCAGCTAACAAACTTGCTAAAGG AAATCGGTTATTCATGAGATTTGCGACGAAAGATGA |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 269-386, + strand, RNAz p=0.584324 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 269-386, + strand, RNAz p=0.584324 |
| Aligned organism(s): 22 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
| 16-131, gnl|bosTau2|chr19 (19053868-19053753) | |
| 16-131, gnl|canFam2|chr9 (50958247-50958368) | |
| 16-131, gnl|danRer3|chr21 (16516022-16515900) | |
| 16-131, gnl|dasNov1|scaffold_155167 (2560-2438) | |
| 16-131, gnl|echTel1|scaffold_294124 (689-811) | |
| 16-131, gnl|fr1|chrUn (255365913-255366045) | |
| 16-131, gnl|galGal2|chr19 (4848262-4848384) | |
| 16-131, gnl|hg17|chr17 (3690141-3690263) | |
| 16-131, gnl|Hg17|chr17 (3690258-3690143) | |
| 16-131, gnl|mm7|chr11 (73135106-73134984) | |
| 16-131, gnl|Mm7|chr11 (73134987-73135102) | |
| 16-131, gnl|oryCun1|scaffold_192281 (8672-8550) | |
| 16-131, gnl|panTro1|chr19 (3990627-3990749) | |
| 16-131, gnl|rheMac2|chr16 (3560010-3560132) | |
| 16-131, gnl|rn3|chr10 (59956362-59956240) | |
| 16-131, gnl|tetNig1|chr7 (9655139-9655007) | |
| 258-386, gnl|bosTau2|chr19 (19044054-19043926) | |
| 258-386, gnl|Hg17|chr17 (3676258-3676130) | |
| 258-386, gnl|Mm7|chr11 (73147145-73147273) | |
| 462-572, gnl|bosTau2|chr19 (19042886-19042776) | |
| 462-572, gnl|Hg17|chr17 (3675095-3674985) | |
| 462-572, gnl|Mm7|chr11 (73149275-73149385) |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 16-131, gnl|bosTau2|chr19 (19053868-19053753) | |
| 16-131, gnl|canFam2|chr9 (50958247-50958368) | |
| 16-131, gnl|danRer3|chr21 (16516022-16515900) | |
| 16-131, gnl|dasNov1|scaffold_155167 (2560-2438) | |
| 16-131, gnl|echTel1|scaffold_294124 (689-811) | |
| 16-131, gnl|fr1|chrUn (255365913-255366045) | |
| 16-131, gnl|galGal2|chr19 (4848262-4848384) | |
| 16-131, gnl|hg17|chr17 (3690141-3690263) | |
| 16-131, gnl|Hg17|chr17 (3690258-3690143) | |
| 16-131, gnl|mm7|chr11 (73135106-73134984) | |
| 16-131, gnl|Mm7|chr11 (73134987-73135102) | |
| 16-131, gnl|oryCun1|scaffold_192281 (8672-8550) | |
| 16-131, gnl|panTro1|chr19 (3990627-3990749) | |
| 16-131, gnl|rheMac2|chr16 (3560010-3560132) | |
| 16-131, gnl|rn3|chr10 (59956362-59956240) | |
| 16-131, gnl|tetNig1|chr7 (9655139-9655007) | |
| 258-386, gnl|bosTau2|chr19 (19044054-19043926) | |
| 258-386, gnl|Hg17|chr17 (3676258-3676130) | |
| 258-386, gnl|Mm7|chr11 (73147145-73147273) | |
| 462-572, gnl|bosTau2|chr19 (19042886-19042776) | |
| 462-572, gnl|Hg17|chr17 (3675095-3674985) | |
| 462-572, gnl|Mm7|chr11 (73149275-73149385) |