Ss1.1-Pig4-TMW8029F10.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CCCAGTTCTGCAAGAGCCCGGAGCTCCAGTTGGGGTAAGGAGATCCCATCCTGAAACTAT CGTAGTACTTTGTGGTGCTGAGGACATTGGAAACCTCAAATGGCCAAATTACTGCAACCT CCGCCCAAGTTCTTGCCCTCAGAGTGGCACATTGCTAACAAGAACCACTACCACCGAGCA GAGGCCCAAAGGTCACGCTCCGAACGCCTGGTGGCAGAAAGTCAGAGGCTTGTGGATGAA ATCGAAAAGACCACAAGAAAATCTCAAAGCGATGTGAACAAGAAACTAGAACAGAGGCTT GAGGAAGTCAGGTTCTGGAAGAAGGAGTTAGATGACAAACTCGAGCAGCTGGTGTCCGCA ACCGAAGACCTGCTCATATGTCAGACCAGATTGGAGAAAGCGCTCGAGAGCCTTCAAGAG CCCCTGCACATCACTGAGAAGTGTCTGGAATACAGGGAGAAGCGAGTTGGCATCGACCTG GTGCGTGATGAAGTGGAGCAGGAGCTGATCAAGGAGGCCGAGGTCATCCAGGGGGTGAGG GCACTGCTGACGCGCACCCTGGAGGAGACGGCCGAGCAGATCAGGCTGAACCGCTCTGCC AAGTACAGTCTTGAGAAGGACCTGAGGGACAAGTTCACGGCCCTGACCATTGACGATATC TGCTTCTCACTCAACAACAACTCGCCCAACATCCGCTATTCTGAGAACGCTGTGAGGATT GAACCGAATTCTGTGAGCCTGGAGGACTGGCTGGACTTCTCCAGCACCAACGTGGAGAAG GCTGACAGGCAGAGGAACAACTCGATGACACTGAAGGCCCTGGTGGACCGCATCTTGTCC CAGACGGCCAGCGACCTGCGAAGGCAGTGTGACGTGGTGGACACCGCGTTCAGGAATGGG CTGAAGGAGACCAAGGATGCCAGGGACAAGCTGGCTGCTCATCTGGCCAAGGTCATGGAA GAGATTGCCTCCCAGGAAAAGAACATGACTGTTCTTGAAAAAGCCATCCTTGATCAAGAG GGGCCTGCCAAGGTGGCTCACACTCGCCTGGAGACCAGGACCCATCGGCCCAACGTGGAG CTGTGTCGCGATGTGGCACAGTATAGGCTCATCAAGGAGGTTGATGAGATCGCTTACAAC GTTGCAAGGTTAAAGGAAACGCTGGCGCAGGCTCAAGCAGAGCTGAAAGGCCTGAATCGC AGGCAGCTCGCCCTGCAGGAGGAGATCCAGGTCAAGGAGAACAGCATCTACATCGACGAG GTGCTGTGCGTCCACATGCGGCGGTCCATCCCTCCGCGCGACGGGGACGACCGCGGGCAG TGGGCCGGGGGGCTCCGGCCCGACGCTGTCTGCTGAAAGCAGGATGCCCACCAAGCCATT CCCATTAAACCGCGTCCTGAAAAA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CCCAGTTCTGCAAGAGCCCGGAGCTCCAGTTGGGGTAAGGAGATCCCATCCTGAAACTAT CGTAGTACTTTGTGGTGCTGAGGACATTGGAAACCTCAAATGGCCAAATTACTGCAACCT CCGCCCAAGTTCTTGCCCTCAGAGTGGCACATTGCTAACAAGAACCACTACCACCGAGCA GAGGCCCAAAGGTCACGCTCCGAACGCCTGGTGGCAGAAAGTCAGAGGCTTGTGGATGAA ATCGAAAAGACCACAAGAAAATCTCAAAGCGATGTGAACAAGAAACTAGAACAGAGGCTT GAGGAAGTCAGGTTCTGGAAGAAGGAGTTAGATGACAAACTCGAGCAGCTGGTGTCCGCA ACCGAAGACCTGCTCATATGTCAGACCAGATTGGAGAAAGCGCTCGAGAGCCTTCAAGAG CCCCTGCACATCACTGAGAAGTGTCTGGAATACAGGGAGAAGCGAGTTGGCATCGACCTG GTGCGTGATGAAGTGGAGCAGGAGCTGATCAAGGAGGCCGAGGTCATCCAGGGGGTGAGG GCACTGCTGACGCGCACCCTGGAGGAGACGGCCGAGCAGATCAGGCTGAACCGCTCTGCC AAGTACAGTCTTGAGAAGGACCTGAGGGACAAGTTCACGGCCCTGACCATTGACGATATC TGCTTCTCACTCAACAACAACTCGCCCAACATCCGCTATTCTGAGAACGCTGTGAGGATT GAACCGAATTCTGTGAGCCTGGAGGACTGGCTGGACTTCTCCAGCACCAACGTGGAGAAG GCTGACAGGCAGAGGAACAACTCGATGACACTGAAGGCCCTGGTGGACCGCATCTTGTCC CAGACGGCCAGCGACCTGCGAAGGCAGTGTGACGTGGTGGACACCGCGTTCAGGAATGGG CTGAAGGAGACCAAGGATGCCAGGGACAAGCTGGCTGCTCATCTGGCCAAGGTCATGGAA GAGATTGCCTCCCAGGAAAAGAACATGACTGTTCTTGAAAAAGCCATCCTTGATCAAGAG GGGCCTGCCAAGGTGGCTCACACTCGCCTGGAGACCAGGACCCATCGGCCCAACGTGGAG CTGTGTCGCGATGTGGCACAGTATAGGCTCATCAAGGAGGTTGATGAGATCGCTTACAAC GTTGCAAGGTTAAAGGAAACGCTGGCGCAGGCTCAAGCAGAGCTGAAAGGCCTGAATCGC AGGCAGCTCGCCCTGCAGGAGGAGATCCAGGTCAAGGAGAACAGCATCTACATCGACGAG GTGCTGTGCGTCCACATGCGGCGGTCCATCCCTCCGCGCGACGGGGACGACCGCGGGCAG TGGGCCGGGGGGCTCCGGCCCGACGCTGTCTGCTGAAAGCAGGATGCCCACCAAGCCATT CCCATTAAACCGCGTCCTGAAAAA |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 81-929, - strand, RNAz p=0.616744 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 81-929, - strand, RNAz p=0.616744 |
| Aligned organism(s): 26 entry(ies) | More info |
| Aligned organism(s): 26 entry(ies) | Help | Less info |
| 81-289, gnl|bosTau2|chr19 (19655552-19655760) | |
| 81-289, gnl|Hg17|chr17 (6674438-6674230) | |
| 81-289, gnl|Mm7|chr11 (72441461-72441253) | |
| 453-585, gnl|bosTau2|chr19 (19631165-19631033) | |
| 453-585, gnl|canFam2|chr5 (33599892-33599785) | |
| 453-585, gnl|danRer3|chr15 (33018719-33018828) | |
| 453-585, gnl|dasNov1|scaffold_52171 (9302-9188) | |
| 453-585, gnl|echTel1|scaffold_207642 (2494-2393) | |
| 453-585, gnl|fr1|chrUn (98567164-98567042) | |
| 453-585, gnl|galGal2|chr19 (9411069-9411174) | |
| 453-585, gnl|hg17|chr17 (6659867-6659981) | |
| 453-585, gnl|Hg17|chr17 (6660008-6659876) | |
| 453-585, gnl|loxAfr1|scaffold_83340 (3245-3359) | |
| 453-585, gnl|mm7|chr11 (72436781-72436888) | |
| 453-585, gnl|Mm7|chr11 (72436915-72436783) | |
| 453-585, gnl|panTro1|chr19_random (45128646-45128532) | |
| 453-585, gnl|rheMac2|chr16 (6519003-6519117) | |
| 453-585, gnl|rn3|chr10 (59246230-59246337) | |
| 453-585, gnl|tetNig1|chr16 (6935464-6935345) | |
| 453-585, gnl|xenTro1|scaffold_32 (765688-765574) | |
| 730-953, gnl|bosTau2|chr19 (19628080-19627857) | |
| 730-953, gnl|Hg17|chr17 (6657095-6656872) | |
| 730-953, gnl|Mm7|chr11 (72433623-72433400) | |
| 1147-1402, gnl|bosTau2|chr19 (19622431-19622175) | |
| 1147-1402, gnl|Hg17|chr17 (6644279-6644020) | |
| 1147-1402, gnl|Mm7|chr11 (72426547-72426299) |
| Aligned organism(s): 26 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 81-289, gnl|bosTau2|chr19 (19655552-19655760) | |
| 81-289, gnl|Hg17|chr17 (6674438-6674230) | |
| 81-289, gnl|Mm7|chr11 (72441461-72441253) | |
| 453-585, gnl|bosTau2|chr19 (19631165-19631033) | |
| 453-585, gnl|canFam2|chr5 (33599892-33599785) | |
| 453-585, gnl|danRer3|chr15 (33018719-33018828) | |
| 453-585, gnl|dasNov1|scaffold_52171 (9302-9188) | |
| 453-585, gnl|echTel1|scaffold_207642 (2494-2393) | |
| 453-585, gnl|fr1|chrUn (98567164-98567042) | |
| 453-585, gnl|galGal2|chr19 (9411069-9411174) | |
| 453-585, gnl|hg17|chr17 (6659867-6659981) | |
| 453-585, gnl|Hg17|chr17 (6660008-6659876) | |
| 453-585, gnl|loxAfr1|scaffold_83340 (3245-3359) | |
| 453-585, gnl|mm7|chr11 (72436781-72436888) | |
| 453-585, gnl|Mm7|chr11 (72436915-72436783) | |
| 453-585, gnl|panTro1|chr19_random (45128646-45128532) | |
| 453-585, gnl|rheMac2|chr16 (6519003-6519117) | |
| 453-585, gnl|rn3|chr10 (59246230-59246337) | |
| 453-585, gnl|tetNig1|chr16 (6935464-6935345) | |
| 453-585, gnl|xenTro1|scaffold_32 (765688-765574) | |
| 730-953, gnl|bosTau2|chr19 (19628080-19627857) | |
| 730-953, gnl|Hg17|chr17 (6657095-6656872) | |
| 730-953, gnl|Mm7|chr11 (72433623-72433400) | |
| 1147-1402, gnl|bosTau2|chr19 (19622431-19622175) | |
| 1147-1402, gnl|Hg17|chr17 (6644279-6644020) | |
| 1147-1402, gnl|Mm7|chr11 (72426547-72426299) |