Ss1.1-Pig4-TMW8029H18.3
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GCGGCTCGAGGCCTCAGGTGTGGCCCTAAAAAGCAAAAAAGAAAAAGGAAGATGGAAGTC
CTTGTAAGGACTTGAGATTCATCTTGAAGTTGAGACTAGGAAAAAGTGCAGACAATAAGA
GACATCATTTGTTACTTTTAGAGCAAGAGGAATTATTAGAGGCTAGAGTTCCACTTGGAG
TTGAAGGTGTCACGTTAGCAACTGGAAAGCAGAATACTCAACCTCGGTTTTCTTTACTCT
CCCCCAAAGGAAAGCATTTCTAAGCTGGAATGAGTCAAGCAAAATAGTTTCAAGGAAATT
GCAACTCCAAATGGAAGATAATAAGCACACCTAAGCACCCAGCCATTTTAAATGAGTTGC
AAATCCCAAGGTATTCAAAAACCTTTGCAGAGAAGATCCTGGAACCCTTGCCAGTGTAAC
TGAGAAAGCCATGGAGGAAGGGAAGGGGGCCCCAGTGCCTGATGGCTGCAAGTGTCCTAG
TATCAGAAAAGAGGAAAAGGTAGATTCTGGAAATTCTAAGTGGGTACGTTTCAGGTGAAT
TCCAAAATTTATTTTGGAATATATTACACTGTGGGTTTGAGAATACCTAGGAAAAGAATC
GGTACATCCACCAAGAACAAGATACAGTAAATAATAATACCAACAATAATCTCATTTGCT
GTTATTTATTTGAAAGTCCACTAGGAAAATTTCCTTGGTCACTTCCAGTTAGACATTGAA
TGCCTCCCTGGCCAGGCTCACAATGAAACAGTGACCTCAGGGTTGCCCTTTCAGGTGGAT
TTCTAGCCCATTTAACCAATGTACTCCTCCACCCAAGTTGGTGATTGAGTTGATGTAAAT
CTGGGGACAGGTCTTACCATTAATGCTTCTGGACTCTGCGTTTGGTCAGCTCAGTGGTTT
TCGTGTCTGCCACACTCACAGTGCAGAAGGCACCCCTATTGGGAGGAAAAGCTAATATTT
GGATGTCAGAAGCAAGATTTTAAGTATCTTGAAACAGTGGGCTGAAACCAACAGGATGGA
TTTAAAAGAAGTGGAAAGACCTGCATTTATAAATATTTTTAAAAATCACCTGCACTAGCA
CTGGGTGAAAGTAGTTTGACTTGACAGTGGTGCATGTGAAAAGGCTAAGGGCTTTCAGCC
GAACTCAGGTTGAATAGAAGCCAGCAGGAACCGAGCAGCTGCTTTGAAAGATAGTCGTTC
TCCCCGCCTTTTAAAGTTTTAAGTGCAAAAGGGTGAAACAGTGAAAAGTATGTCTCTCTA
CCAGAACCATTTCTCTTCCCAGGAGGCAACTGCTGTTAACAGTTTCTAGAAGATCTTCTC
AGAGGTATTCTGTGCACATAAAAGCAAATGCAGAAACTTCCCTTGTGGCTGCATTGCTGG
AACTGTGGTGCAGGCTGCAACTGCGGCTCAGTTTCTATCCCTGTATCCCCGGCCTGGAAA
CTTCCACATGCCGTGGTTGCCGCC
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Blue-coloured subsequences are predicted RNA structures by RNAz
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GCGGCTCGAGGCCTCAGGTGTGGCCCTAAAAAGCAAAAAAGAAAAAGGAAGATGGAAGTC
CTTGTAAGGACTTGAGATTCATCTTGAAGTTGAGACTAGGAAAAAGTGCAGACAATAAGA
GACATCATTTGTTACTTTTAGAGCAAGAGGAATTATTAGAGGCTAGAGTTCCACTTGGAG
TTGAAGGTGTCACGTTAGCAACTGGAAAGCAGAATACTCAACCTCGGTTTTCTTTACTCT
CCCCCAAAGGAAAGCATTTCTAAGCTGGAATGAGTCAAGCAAAATAGTTTCAAGGAAATT
GCAACTCCAAATGGAAGATAATAAGCACACCTAAGCACCCAGCCATTTTAAATGAGTTGC
AAATCCCAAGGTATTCAAAAACCTTTGCAGAGAAGATCCTGGAACCCTTGCCAGTGTAAC
TGAGAAAGCCATGGAGGAAGGGAAGGGGGCCCCAGTGCCTGATGGCTGCAAGTGTCCTAG
TATCAGAAAAGAGGAAAAGGTAGATTCTGGAAATTCTAAGTGGGTACGTTTCAGGTGAAT
TCCAAAATTTATTTTGGAATATATTACACTGTGGGTTTGAGAATACCTAGGAAAAGAATC
GGTACATCCACCAAGAACAAGATACAGTAAATAATAATACCAACAATAATCTCATTTGCT
GTTATTTATTTGAAAGTCCACTAGGAAAATTTCCTTGGTCACTTCCAGTTAGACATTGAA
TGCCTCCCTGGCCAGGCTCACAATGAAACAGTGACCTCAGGGTTGCCCTTTCAGGTGGAT
TTCTAGCCCATTTAACCAATGTACTCCTCCACCCAAGTTGGTGATTGAGTTGATGTAAAT
CTGGGGACAGGTCTTACCATTAATGCTTCTGGACTCTGCGTTTGGTCAGCTCAGTGGTTT
TCGTGTCTGCCACACTCACAGTGCAGAAGGCACCCCTATTGGGAGGAAAAGCTAATATTT
GGATGTCAGAAGCAAGATTTTAAGTATCTTGAAACAGTGGGCTGAAACCAACAGGATGGA
TTTAAAAGAAGTGGAAAGACCTGCATTTATAAATATTTTTAAAAATCACCTGCACTAGCA
CTGGGTGAAAGTAGTTTGACTTGACAGTGGTGCATGTGAAAAGGCTAAGGGCTTTCAGCC
GAACTCAGGTTGAATAGAAGCCAGCAGGAACCGAGCAGCTGCTTTGAAAGATAGTCGTTC
TCCCCGCCTTTTAAAGTTTTAAGTGCAAAAGGGTGAAACAGTGAAAAGTATGTCTCTCTA
CCAGAACCATTTCTCTTCCCAGGAGGCAACTGCTGTTAACAGTTTCTAGAAGATCTTCTC
AGAGGTATTCTGTGCACATAAAAGCAAATGCAGAAACTTCCCTTGTGGCTGCATTGCTGG
AACTGTGGTGCAGGCTGCAACTGCGGCTCAGTTTCTATCCCTGTATCCCCGGCCTGGAAA
CTTCCACATGCCGTGGTTGCCGCC
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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
350-584, gnl|bosTau2|chr15 (48744650-48744878) |
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350-584, gnl|canFam2|chr18 (45087596-45087382) |
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350-584, gnl|hg17|chr11 (47584036-47584278) |
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350-584, gnl|Hg17|chr11 (47584276-47584065) |
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350-584, gnl|loxAfr1|scaffold_9590 (21607-21300) |
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350-584, gnl|mm7|chr2 (90722963-90722743) |
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350-584, gnl|panTro1|chr9 (48106557-48106794) |
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350-584, gnl|rheMac2|chr14 (24506219-24505982) |
| |
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634-1352, gnl|bosTau2|chr15 (48745694-48746427) |
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634-1352, gnl|Hg17|chr11 (47584009-47582956) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
350-584, gnl|bosTau2|chr15 (48744650-48744878) |
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350-584, gnl|canFam2|chr18 (45087596-45087382) |
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350-584, gnl|hg17|chr11 (47584036-47584278) |
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350-584, gnl|Hg17|chr11 (47584276-47584065) |
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350-584, gnl|loxAfr1|scaffold_9590 (21607-21300) |
|
350-584, gnl|mm7|chr2 (90722963-90722743) |
|
350-584, gnl|panTro1|chr9 (48106557-48106794) |
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350-584, gnl|rheMac2|chr14 (24506219-24505982) |
| |
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634-1352, gnl|bosTau2|chr15 (48745694-48746427) |
|
634-1352, gnl|Hg17|chr11 (47584009-47582956) |
