Non-Coding RNA Search

Ss1.1-Pig4-TMW8031J08.3

Sequence:


               
               CCAAGACACATATTAATCAAACTGACCAAAATTAAAGACAAAGAAAAAATATTGAAAGCA
GCTGGGGAAAAGAAACAAATAATATACAAGGGAACCCCAATAAGGTTATCAGCAGATTTT
TCAGCAGAAACTCTGCAGGCCAGAAGGGAGTGGCATGATATACTTAAAATGATGAAAAGA
AAAAACCTCCAACCAAGATTATTCTACCCAGCAAGGCTCTCATTCAGATTTGAAGGAGAA
ATCAAAAGCTTTACAGACACGTAAAAGCTAAGAGAATTCAGCACCACTAAATCAGCTTTA
CAACAAAGATGAAATAACTTCTCTAGGTGGAAAAGGCCACAACTAGAAACGAAAATATTA
CAAATAACAAGGTTCACCAGAAAAGGCATATATATAGTAAAGGTAGGAAATCATTTGCAC
ACAAATATGCTACCAAAATCAGAAATCGTGAGAAGACAGGACAAATGCAGGACCCTGGAG
ATGCACTTGCAATTAAGAAGCAACAACTTTGTGTGTGTATGTGTGTGTATACACACACAC
ACATATATATATGTTTATGTGTGTGTATATATATATATATATAGAGAGAGAGAGAGAGAG
GCTCCTATATCAAAACTTCAGGGTTACTGCAAACCAAAAATCTACAATAGATACACACAC
AAATAAGAAAAAGCAATTCACAAATACAAAACTAAAGATAGTCATCAAACCACAAGAGAA
GAAGGGAAGAAAAAAGACCAACAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CCAAGACACATATTAATCAAACTGACCAAAATTAAAGACAAAGAAAAAATATTGAAAGCA
GCTGGGGAAAAGAAACAAATAATATACAAGGGAACCCCAATAAGGTTATCAGCAGATTTT
TCAGCAGAAACTCTGCAGGCCAGAAGGGAGTGGCATGATATACTTAAAATGATGAAAAGA
AAAAACCTCCAACCAAGATTATTCTACCCAGCAAGGCTCTCATTCAGATTTGAAGGAGAA
ATCAAAAGCTTTACAGACACGTAAAAGCTAAGAGAATTCAGCACCACTAAATCAGCTTTA
CAACAAAGATGAAATAACTTCTCTAGGTGGAAAAGGCCACAACTAGAAACGAAAATATTA
CAAATAACAAGGTTCACCAGAAAAGGCATATATATAGTAAAGGTAGGAAATCATTTGCAC
ACAAATATGCTACCAAAATCAGAAATCGTGAGAAGACAGGACAAATGCAGGACCCTGGAG
ATGCACTTGCAATTAAGAAGCAACAACTTTGTGTGTGTATGTGTGTGTATACACACACAC
ACATATATATATGTTTATGTGTGTGTATATATATATATATATAGAGAGAGAGAGAGAGAG
GCTCCTATATCAAAACTTCAGGGTTACTGCAAACCAAAAATCTACAATAGATACACACAC
AAATAAGAAAAAGCAATTCACAAATACAAAACTAAAGATAGTCATCAAACCACAAGAGAA
GAAGGGAAGAAAAAAGACCAACAA

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|34528169|dbj|BAC85466.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|34528169|dbj|BAC85466.1|

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               41-280, - strand, RNAz p=0.968937

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               41-280, - strand, RNAz p=0.968937

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               1-427, gnl|bosTau2|chr10 (24298856-24298428)
               


               
               580-744, gnl|bosTau2|chr10 (31524294-31524452)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-427, gnl|bosTau2|chr10 (24298856-24298428)
               


               
               580-744, gnl|bosTau2|chr10 (31524294-31524452)

	1-427, gnl\|bosTau2\|chr10 (24298856-24298428)

	580-744, gnl\|bosTau2\|chr10 (31524294-31524452)