Non-Coding RNA Search

Ss1.1-Pig4-TMW8031M16.3

Sequence:


               
               GTGGGACTCTGGCAGTTCCTGCATGGACAGTGCCCGGGCACAAGCTGTCAAGAATCCTCA
ACTTTGAAGACTGACCACATCAGGCCAGCTGTGGGCCTTCGCTTTGAGGTGGGCCCTGGT
GCAGCTGTTCATTCTCTGCTGGCTGCACAGAATGGCTTCCTGCATTTCTTGCTCCGTGGC
TGTGACCTTGAGCTGCTCACTTCGGTGCTCAATGGCCTGGGGCCTTTCTTGGAGGACGAG
GAGACCCCAGTGGTAGTTCCCATGAAGATTGAGCTCCTGAACTCCAGGATTACTCTAAAG
GATGATATCCCCCCCATCTATCCGACATCTCCAGGCCCTGTCCCCATCACTCTGGCCATG
GAGCATGTCGTGCTGAAGCGCAGTGATGATGGTGTGTTCCACATCGGTGCTGCTGCTCAG
GACAGACCATCAGCTGAAGTTCTGAAAAGCGAGAAGAGGCAGCCCCCCAAAGAACAGGTG
AAAGAACTGCCTACCCTACAAAAGGAACTTATAGAAACTAAACAAGCATTGGCTCAGGCC
AACCAGGATAAAGAAAAACTTCTTCAGGAGATTAGGAAATATAACCCCCTCTTTGAGCTC
TGACAGCAGAGGCTCAGCCATCTGTGCTGCGGAGAGAGGAGGAGATCACCAGCAGTCGCA
CCACCCGCGACAGGCGCCGACCAGTGTTGGACAGGTCAGGTCGGCAGAGGAGGCTCACCG
CTTTTGGCGGTGTCCTCTCTACAGCTGTGCTGACTTGTGTGGGAGGCAGGGTGAAGCATG
ACCACCTTCCCGGAAGTTGGGGGCAGCTTTGTGTGTGGCTCAAGCATCACGTCTTGCCTG
TATAAAGCCTTTTGGCCCTCTGAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GTGGGACTCTGGCAGTTCCTGCATGGACAGTGCCCGGGCACAAGCTGTCAAGAATCCTCA
ACTTTGAAGACTGACCACATCAGGCCAGCTGTGGGCCTTCGCTTTGAGGTGGGCCCTGGT
GCAGCTGTTCATTCTCTGCTGGCTGCACAGAATGGCTTCCTGCATTTCTTGCTCCGTGGC
TGTGACCTTGAGCTGCTCACTTCGGTGCTCAATGGCCTGGGGCCTTTCTTGGAGGACGAG
GAGACCCCAGTGGTAGTTCCCATGAAGATTGAGCTCCTGAACTCCAGGATTACTCTAAAG
GATGATATCCCCCCCATCTATCCGACATCTCCAGGCCCTGTCCCCATCACTCTGGCCATG
GAGCATGTCGTGCTGAAGCGCAGTGATGATGGTGTGTTCCACATCGGTGCTGCTGCTCAG
GACAGACCATCAGCTGAAGTTCTGAAAAGCGAGAAGAGGCAGCCCCCCAAAGAACAGGTG
AAAGAACTGCCTACCCTACAAAAGGAACTTATAGAAACTAAACAAGCATTGGCTCAGGCC
AACCAGGATAAAGAAAAACTTCTTCAGGAGATTAGGAAATATAACCCCCTCTTTGAGCTC
TGACAGCAGAGGCTCAGCCATCTGTGCTGCGGAGAGAGGAGGAGATCACCAGCAGTCGCA
CCACCCGCGACAGGCGCCGACCAGTGTTGGACAGGTCAGGTCGGCAGAGGAGGCTCACCG
CTTTTGGCGGTGTCCTCTCTACAGCTGTGCTGACTTGTGTGGGAGGCAGGGTGAAGCATG
ACCACCTTCCCGGAAGTTGGGGGCAGCTTTGTGTGTGGCTCAAGCATCACGTCTTGCCTG
TATAAAGCCTTTTGGCCCTCTGAA

Coded protein: 1 entry(ies)

More info

Coded protein: 1 entry(ies)

Help | Less info


               
               gi|61861186|ref|XP_604642.1|

Coded protein: 1 entry(ies)

Help | Less info

Protein identifier


               
               gi|61861186|ref|XP_604642.1|

Aligned organism(s): 6 entry(ies)

More info

Aligned organism(s): 6 entry(ies)

Help | Less info


               
               37-301, gnl|bosTau2|chr23 (9019852-9020116)
               

               
               37-301, gnl|Hg17|chr6 (34946608-34946872)
               

               
               37-301, gnl|Mm7|chr17 (26080177-26080441)
               


               
               475-841, gnl|bosTau2|chr23 (9021297-9021661)
               

               
               475-841, gnl|Hg17|chr6 (34948065-34948448)
               

               
               475-841, gnl|Mm7|chr17 (26081510-26081837)

Aligned organism(s): 6 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               37-301, gnl|bosTau2|chr23 (9019852-9020116)
               

               
               37-301, gnl|Hg17|chr6 (34946608-34946872)
               

               
               37-301, gnl|Mm7|chr17 (26080177-26080441)
               


               
               475-841, gnl|bosTau2|chr23 (9021297-9021661)
               

               
               475-841, gnl|Hg17|chr6 (34948065-34948448)
               

               
               475-841, gnl|Mm7|chr17 (26081510-26081837)

	37-301, gnl\|bosTau2\|chr23 (9019852-9020116)
	37-301, gnl\|Hg17\|chr6 (34946608-34946872)
	37-301, gnl\|Mm7\|chr17 (26080177-26080441)

	475-841, gnl\|bosTau2\|chr23 (9021297-9021661)
	475-841, gnl\|Hg17\|chr6 (34948065-34948448)
	475-841, gnl\|Mm7\|chr17 (26081510-26081837)