Ss1.1-Pig4-TMW8032C24.3
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GGCCGGAGGAATGGCTCGGGGGGCTGGAGCCAGAGCACCGTGTCCCACTCAGCGGCCTTG
GTGCCCGAGCCGCAGAGGCCCCCCAGCGAGAGCGAGGTGTGTCCCAGGCTGCCCTTTGCT
GTCGCGCCTGGCAAGAGGCCCGCCCTGGAGGGGCTGCTCCTGGAAGCTCTCCTTGACCTG
GTGGACAGGTACTGGAGTGGCTGCAGATCGCTGCATGGCAACGAGCTGTTCCTGGCTCAG
GCACGACACATTTTGTCATCTCTTCAAGAAGTTACAGCTGCTCAGGACAGTTCAACCACT
GTGAGTGAAGAAATTGGCTACCTGACTCTGGAGAATAAGTCTTTGCACAGTCACCTGGGT
GAGCTGCAGCGGCAGTGCGGTGCGAAGCTGAGCGAGGTGGTGCTGGAACTTGGCAGCACT
CGGAAGGAGATGGATTACCTGCGGCAGCGTCTAGACAGATCTCTGGACGAGAGCAGCAGC
CTAAAGTCCCTCCTGTGCAGCGTGAAGAAAGACGTGAGGGGCGCCGAGGCCCCAGCCGCG
CTGACCGTGCAGATCACTGGGTTGCAGACCAGTGTGAAGAGGCTTTCTGGCGAGATCGTG
GAGCTGAAGCAGCACCTGGAGCACTACGACAAGCTCCAGGAGCTCACCCAGATGCTGCAG
GAGAGCCACAGGTCCCTGGTCAGCACCAACGAGCGGCTCCTGCAGGAGCTGGGCCAGGCG
CGGGCGCAGCACCAGGCAGAGGTGGAGCAGCTGCACTGGAGCTACCGCGAGCTCAAGAAG
ACCATGGGCCTGTGCCCCGGCCGCCCCGGCCCCGGCCCCGGCCCCAGCCCCGGGGGCTGC
TAGCCCTGGGCTCCGGCCCCACCAGCCGGCGCCCTCAGCGTCTCTCTCTCTGGAGGTGGC
CGGCGAGCCTGGGCCTCATGTCCTGAAACACCCTAAAAAGACAGGCTCAAGCCGGGCCCC
TCTCCTCTTTGAATGAGACAAACAGCATTCAGTTTTCATCCAGTATCTTGAGGTGGAGAA
AATGCTGTATTTTTCTGCCTAATGCGCGAGAAAGCAGGTACGTATGAGGAGCAGAAAGTC
AGCTACTGAGGAACGAGCAATGCTTGTGTAATAAACAGACCCGCAAAA
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Blue-coloured subsequences are predicted RNA structures by RNAz
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GGCCGGAGGAATGGCTCGGGGGGCTGGAGCCAGAGCACCGTGTCCCACTCAGCGGCCTTG
GTGCCCGAGCCGCAGAGGCCCCCCAGCGAGAGCGAGGTGTGTCCCAGGCTGCCCTTTGCT
GTCGCGCCTGGCAAGAGGCCCGCCCTGGAGGGGCTGCTCCTGGAAGCTCTCCTTGACCTG
GTGGACAGGTACTGGAGTGGCTGCAGATCGCTGCATGGCAACGAGCTGTTCCTGGCTCAG
GCACGACACATTTTGTCATCTCTTCAAGAAGTTACAGCTGCTCAGGACAGTTCAACCACT
GTGAGTGAAGAAATTGGCTACCTGACTCTGGAGAATAAGTCTTTGCACAGTCACCTGGGT
GAGCTGCAGCGGCAGTGCGGTGCGAAGCTGAGCGAGGTGGTGCTGGAACTTGGCAGCACT
CGGAAGGAGATGGATTACCTGCGGCAGCGTCTAGACAGATCTCTGGACGAGAGCAGCAGC
CTAAAGTCCCTCCTGTGCAGCGTGAAGAAAGACGTGAGGGGCGCCGAGGCCCCAGCCGCG
CTGACCGTGCAGATCACTGGGTTGCAGACCAGTGTGAAGAGGCTTTCTGGCGAGATCGTG
GAGCTGAAGCAGCACCTGGAGCACTACGACAAGCTCCAGGAGCTCACCCAGATGCTGCAG
GAGAGCCACAGGTCCCTGGTCAGCACCAACGAGCGGCTCCTGCAGGAGCTGGGCCAGGCG
CGGGCGCAGCACCAGGCAGAGGTGGAGCAGCTGCACTGGAGCTACCGCGAGCTCAAGAAG
ACCATGGGCCTGTGCCCCGGCCGCCCCGGCCCCGGCCCCGGCCCCAGCCCCGGGGGCTGC
TAGCCCTGGGCTCCGGCCCCACCAGCCGGCGCCCTCAGCGTCTCTCTCTCTGGAGGTGGC
CGGCGAGCCTGGGCCTCATGTCCTGAAACACCCTAAAAAGACAGGCTCAAGCCGGGCCCC
TCTCCTCTTTGAATGAGACAAACAGCATTCAGTTTTCATCCAGTATCTTGAGGTGGAGAA
AATGCTGTATTTTTCTGCCTAATGCGCGAGAAAGCAGGTACGTATGAGGAGCAGAAAGTC
AGCTACTGAGGAACGAGCAATGCTTGTGTAATAAACAGACCCGCAAAA
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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
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220-436, gnl|bosTau2|chr20 (42856102-42855885) |
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220-436, gnl|Hg17|chr5 (693484-693738) |
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220-436, gnl|Mm7|chr13 (70980071-70979866) |
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666-846, gnl|bosTau2|chr20 (42848300-42848116) |
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666-846, gnl|canFam2|chr34 (14654686-14654413) |
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666-846, gnl|echTel1|scaffold_288200 (44978-45235) |
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666-846, gnl|galGal2|chrUn (62626681-62626392) |
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666-846, gnl|hg17|chr5 (706007-706287) |
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666-846, gnl|Hg17|chr5 (706097-706367) |
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666-846, gnl|mm7|chr13 (70971309-70970981) |
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666-846, gnl|Mm7|chr13 (70971166-70970981) |
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666-846, gnl|oryCun1|scaffold_156455 (4159-4422) |
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666-846, gnl|rheMac2|chr6 (407235-407515) |
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666-846, gnl|rn3|chr1 (30063876-30064178) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
220-436, gnl|bosTau2|chr20 (42856102-42855885) |
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220-436, gnl|Hg17|chr5 (693484-693738) |
|
220-436, gnl|Mm7|chr13 (70980071-70979866) |
| |
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666-846, gnl|bosTau2|chr20 (42848300-42848116) |
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666-846, gnl|canFam2|chr34 (14654686-14654413) |
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666-846, gnl|echTel1|scaffold_288200 (44978-45235) |
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666-846, gnl|galGal2|chrUn (62626681-62626392) |
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666-846, gnl|hg17|chr5 (706007-706287) |
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666-846, gnl|Hg17|chr5 (706097-706367) |
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666-846, gnl|mm7|chr13 (70971309-70970981) |
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666-846, gnl|Mm7|chr13 (70971166-70970981) |
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666-846, gnl|oryCun1|scaffold_156455 (4159-4422) |
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666-846, gnl|rheMac2|chr6 (407235-407515) |
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666-846, gnl|rn3|chr1 (30063876-30064178) |
