Ss1.1-Pig4-TMW8032F05.3
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TTTACAGGTTGGGTCGCCGAAGGAAAACCATGAAGCTCTGTCGAGAGCTCTCTGATTTGG TTGTGTACACAAACTCCGTGGCAGCCCAGGACATTGTGGATGATGGAACCACAGGAAATG TGTTATCCTTCAGTGAAACAAGAGCACATCAGGTGGTTCAGCAGAAATCAGAGCAGTTCA TGATTTATAACCAAAAGCAGCTCACAAGGATTTATCCCTCCGCCTACCGCATTGATTCCA GCAATTTCAATCCTCTGCCCTATTGGAACGCAGGTTGCCAGCTAGTGGCACTGAACTACC AGTCTGAAGGGCGAATGATGCAGTTAAATCGAGCCAAATTCAAGACAAATGGCAATTGTG GCTACGTCCTGAAACCCCAGCAGATGTGCAAAGGTACTTTCAACCCTTTCTCTGGTGATC CACTTCCTGCAAACCCCAAAAAGCAGCTCATCCTGAAAGTGATCAGTGGACAACAACTCC CCAAACCACCAGACTCCATGTTTGGAGACCGGGGTGAGGTGAGTGTATGACCAGGTGCTC AATTATGTAATTATATTATTGTGTTTAGATTTCATCTGAAATGTCTTCACAGCTCTGTGT GTGTGTGTGTGTGTGTGTGTGTGTGTAAGTGAGCACTGACCTCAGCTCATCATATATTAA CTGACTTAGTGG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TTTACAGGTTGGGTCGCCGAAGGAAAACCATGAAGCTCTGTCGAGAGCTCTCTGATTTGG TTGTGTACACAAACTCCGTGGCAGCCCAGGACATTGTGGATGATGGAACCACAGGAAATG TGTTATCCTTCAGTGAAACAAGAGCACATCAGGTGGTTCAGCAGAAATCAGAGCAGTTCA TGATTTATAACCAAAAGCAGCTCACAAGGATTTATCCCTCCGCCTACCGCATTGATTCCA GCAATTTCAATCCTCTGCCCTATTGGAACGCAGGTTGCCAGCTAGTGGCACTGAACTACC AGTCTGAAGGGCGAATGATGCAGTTAAATCGAGCCAAATTCAAGACAAATGGCAATTGTG GCTACGTCCTGAAACCCCAGCAGATGTGCAAAGGTACTTTCAACCCTTTCTCTGGTGATC CACTTCCTGCAAACCCCAAAAAGCAGCTCATCCTGAAAGTGATCAGTGGACAACAACTCC CCAAACCACCAGACTCCATGTTTGGAGACCGGGGTGAGGTGAGTGTATGACCAGGTGCTC AATTATGTAATTATATTATTGTGTTTAGATTTCATCTGAAATGTCTTCACAGCTCTGTGT GTGTGTGTGTGTGTGTGTGTGTGTGTAAGTGAGCACTGACCTCAGCTCATCATATATTAA CTGACTTAGTGG |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 392-565, - strand, RNAz p=0.991577 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 392-565, - strand, RNAz p=0.991577 |
| Aligned organism(s): 22 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
| 105-285, gnl|bosTau2|chr1 (71821154-71821334) | |
| 105-285, gnl|canFam2|chr23 (52347693-52347831) | |
| 105-285, gnl|danRer3|chr18 (36009389-36009516) | |
| 105-285, gnl|dasNov1|scaffold_14830 (10805-10663) | |
| 105-285, gnl|echTel1|scaffold_179007 (1448-1307) | |
| 105-285, gnl|fr1|chrUn (16158750-16158623) | |
| 105-285, gnl|galGal2|chr9 (22469119-22468977) | |
| 105-285, gnl|hg17|chr3 (156694813-156694955) | |
| 105-285, gnl|Hg17|chr3 (156695009-156694829) | |
| 105-285, gnl|loxAfr1|scaffold_19245 (20166-20308) | |
| 105-285, gnl|mm7|chr3 (63856924-63857066) | |
| 105-285, gnl|Mm7|chr3 (63857120-63856940) | |
| 105-285, gnl|monDom2|scaffold_69 (3150366-3150213) | |
| 105-285, gnl|oryCun1|scaffold_161649 (5109-4967) | |
| 105-285, gnl|panTro1|chr2 (159830717-159830859) | |
| 105-285, gnl|rheMac2|chr2 (132168198-132168056) | |
| 105-285, gnl|rn3|chr2 (153432009-153432151) | |
| 105-285, gnl|tetNig1|chr16 (2611229-2611356) | |
| 105-285, gnl|xenTro1|scaffold_369 (1114082-1114228) | |
| 392-672, gnl|bosTau2|chr1 (71824037-71824306) | |
| 392-672, gnl|Hg17|chr3 (156693346-156693073) | |
| 392-672, gnl|Mm7|chr3 (63855419-63855115) |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 105-285, gnl|bosTau2|chr1 (71821154-71821334) | |
| 105-285, gnl|canFam2|chr23 (52347693-52347831) | |
| 105-285, gnl|danRer3|chr18 (36009389-36009516) | |
| 105-285, gnl|dasNov1|scaffold_14830 (10805-10663) | |
| 105-285, gnl|echTel1|scaffold_179007 (1448-1307) | |
| 105-285, gnl|fr1|chrUn (16158750-16158623) | |
| 105-285, gnl|galGal2|chr9 (22469119-22468977) | |
| 105-285, gnl|hg17|chr3 (156694813-156694955) | |
| 105-285, gnl|Hg17|chr3 (156695009-156694829) | |
| 105-285, gnl|loxAfr1|scaffold_19245 (20166-20308) | |
| 105-285, gnl|mm7|chr3 (63856924-63857066) | |
| 105-285, gnl|Mm7|chr3 (63857120-63856940) | |
| 105-285, gnl|monDom2|scaffold_69 (3150366-3150213) | |
| 105-285, gnl|oryCun1|scaffold_161649 (5109-4967) | |
| 105-285, gnl|panTro1|chr2 (159830717-159830859) | |
| 105-285, gnl|rheMac2|chr2 (132168198-132168056) | |
| 105-285, gnl|rn3|chr2 (153432009-153432151) | |
| 105-285, gnl|tetNig1|chr16 (2611229-2611356) | |
| 105-285, gnl|xenTro1|scaffold_369 (1114082-1114228) | |
| 392-672, gnl|bosTau2|chr1 (71824037-71824306) | |
| 392-672, gnl|Hg17|chr3 (156693346-156693073) | |
| 392-672, gnl|Mm7|chr3 (63855419-63855115) |