Ss1.1-Pig4-TMW8032H11.3
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GGTGACCTCGGTTCGTTTTGGGAAGTTAAGAGCTGTTTTACCTGACACAGGCCGGACCCA GCACTCCGGTCCCCGTCCCTTCGGCAAGATGGTGAAGCCCAAGTACAAAGGACGGAGTAC TATCAACCCTTCTAATGCCAGCACAAATCCCGATCGAGTGCAGGGCGCAGGAGGCCAGAA CATGAGGGACCGGGCCACAATCCGCCGCCTGAATATGTACAGGCAGAAGGAGCGCAGGAA CAGCCGTGGTAAAGTGATTAAGCCTCTGCAATATCAATCAACGGTGGCTTCTGGCACAGT GGCGAGAGTGGAGCCAAACATAAAGTGGTTTGGAAATACACGTGTGATTAAACAGTCATC ATTACAAAAATTTCAAGAGGAGATGGACACAGTCTTGAAGGATCCATACAAAGTTGTCAT GAAGCAAAGCAAGTTACCCATGTCTCTGCTCCATGATCGAATCCGGCCTCATAATTCAAA GGTGCACATTCTTGATACTGAAAGCTTCGAAACTACATTTGGCCCTAAAGCACAGAGGAA GCGACCAAATTTATTTGCAAGTGATATGCAGTCACTTATAGAAAATGCAGAAATGTCCAC TGAGAGCTACGACCAGGGCAAGGATCGTGATTTGGTAGCTGAAGACACTGGTGTGAGAAA TGAAGCCCAAGAAGAGATATATAAAAAGGGACAGTCCAAAAGAATATGGGGTGAACTCTA CAAGGTGATAGATTCATCAGATGTTGTAGTTCAAGTTCTTGATGCTCGAGATCCAATGGG CACCCGTTCCCCTCACATTGAGACTTACTTGAAAAAGGAAAAACCCTGGAAACACCTCAT TTTTGTTCTTAACAAATGTGACCTCGTTCCAACCTGGGCAACAGTAAGTACAGCTGCTAA TCCAAAACAGACGGCCGGGGCCACGCAGCGCATGCAGGTTCCAAGTGATCCATAAGTAAG TCAGCCTCGTGGTCACTAGGGTTTTGGCCAGCAGTTAAAGCGTCGCACATATTGAGGGGG TAGTCATCAAGTGTCCTCATTGAAAACAAAATGAAGATGGGCTTCAGTGATGGTGGGCAG TCACCTTTGATCCTCTGATGGTTGGCAGTGGGACAGCCGTACCCACAGGACGGATGACGT GCACCTCTTCAGAAGGGGCGGCTGCACGACCCCGGCCTGTTTCGCATTATGTTACATTCA TTGCATTTAGTAGCAATGAAGGCATTTTTGGAATATTGTTTTGTGTTTATAAGACAAAAG ACAAAGCATTAA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GGTGACCTCGGTTCGTTTTGGGAAGTTAAGAGCTGTTTTACCTGACACAGGCCGGACCCA GCACTCCGGTCCCCGTCCCTTCGGCAAGATGGTGAAGCCCAAGTACAAAGGACGGAGTAC TATCAACCCTTCTAATGCCAGCACAAATCCCGATCGAGTGCAGGGCGCAGGAGGCCAGAA CATGAGGGACCGGGCCACAATCCGCCGCCTGAATATGTACAGGCAGAAGGAGCGCAGGAA CAGCCGTGGTAAAGTGATTAAGCCTCTGCAATATCAATCAACGGTGGCTTCTGGCACAGT GGCGAGAGTGGAGCCAAACATAAAGTGGTTTGGAAATACACGTGTGATTAAACAGTCATC ATTACAAAAATTTCAAGAGGAGATGGACACAGTCTTGAAGGATCCATACAAAGTTGTCAT GAAGCAAAGCAAGTTACCCATGTCTCTGCTCCATGATCGAATCCGGCCTCATAATTCAAA GGTGCACATTCTTGATACTGAAAGCTTCGAAACTACATTTGGCCCTAAAGCACAGAGGAA GCGACCAAATTTATTTGCAAGTGATATGCAGTCACTTATAGAAAATGCAGAAATGTCCAC TGAGAGCTACGACCAGGGCAAGGATCGTGATTTGGTAGCTGAAGACACTGGTGTGAGAAA TGAAGCCCAAGAAGAGATATATAAAAAGGGACAGTCCAAAAGAATATGGGGTGAACTCTA CAAGGTGATAGATTCATCAGATGTTGTAGTTCAAGTTCTTGATGCTCGAGATCCAATGGG CACCCGTTCCCCTCACATTGAGACTTACTTGAAAAAGGAAAAACCCTGGAAACACCTCAT TTTTGTTCTTAACAAATGTGACCTCGTTCCAACCTGGGCAACAGTAAGTACAGCTGCTAA TCCAAAACAGACGGCCGGGGCCACGCAGCGCATGCAGGTTCCAAGTGATCCATAAGTAAG TCAGCCTCGTGGTCACTAGGGTTTTGGCCAGCAGTTAAAGCGTCGCACATATTGAGGGGG TAGTCATCAAGTGTCCTCATTGAAAACAAAATGAAGATGGGCTTCAGTGATGGTGGGCAG TCACCTTTGATCCTCTGATGGTTGGCAGTGGGACAGCCGTACCCACAGGACGGATGACGT GCACCTCTTCAGAAGGGGCGGCTGCACGACCCCGGCCTGTTTCGCATTATGTTACATTCA TTGCATTTAGTAGCAATGAAGGCATTTTTGGAATATTGTTTTGTGTTTATAAGACAAAAG ACAAAGCATTAA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 68 entry(ies) | More info |
| Aligned organism(s): 68 entry(ies) | Help | Less info |
| 6-152, gnl|bosTau2|chr3 (75717182-75717328) | |
| 6-152, gnl|Hg17|chr1 (37730598-37730453) | |
| 6-152, gnl|Mm7|chr4 (124474704-124474841) | |
| 332-472, gnl|bosTau2|chr3 (75721949-75722089) | |
| 332-472, gnl|canFam2|chr15 (7905532-7905415) | |
| 332-472, gnl|canFam2|chr15 (7905505-7905415) | |
| 332-472, gnl|danRer3|chr16 (46185417-46185534) | |
| 332-472, gnl|danRer3|chr16 (46185453-46185534) | |
| 332-472, gnl|dasNov1|scaffold_60930 (1551-1643) | |
| 332-472, gnl|dasNov1|scaffold_60930 (1552-1643) | |
| 332-472, gnl|echTel1|scaffold_319625 (45976-45859) | |
| 332-472, gnl|echTel1|scaffold_319625 (45948-45859) | |
| 332-472, gnl|fr1|chrUn (99467357-99467481) | |
| 332-472, gnl|fr1|chrUn (99467399-99467481) | |
| 332-472, gnl|galGal2|chr23 (3289375-3289279) | |
| 332-472, gnl|hg17|chr1 (37725375-37725492) | |
| 332-472, gnl|Hg17|chr1 (37725540-37725400) | |
| 332-472, gnl|hg17|chr7 (49760915-49761005) | |
| 332-472, gnl|mm7|chr4 (124482335-124482218) | |
| 332-472, gnl|mm7|chr4 (124482307-124482218) | |
| 332-472, gnl|Mm7|chr4 (124482168-124482308) | |
| 332-472, gnl|monDom2|scaffold_43 (12071949-12071832) | |
| 332-472, gnl|monDom2|scaffold_43 (12071922-12071832) | |
| 332-472, gnl|oryCun1|scaffold_201047 (99523-99643) | |
| 332-472, gnl|oryCun1|scaffold_201047 (99550-99643) | |
| 332-472, gnl|panTro1|chr1 (38566810-38566927) | |
| 332-472, gnl|panTro1|chr6 (51358797-51358885) | |
| 332-472, gnl|rheMac2|chr1 (40455025-40455142) | |
| 332-472, gnl|rheMac2|chr3 (76450692-76450602) | |
| 332-472, gnl|rn3|chr5 (144391258-144391141) | |
| 332-472, gnl|rn3|chr5 (144391230-144391141) | |
| 332-472, gnl|tetNig1|chrUn_random (30690602-30690506) | |
| 332-472, gnl|tetNig1|chrUn_random (30690593-30690506) | |
| 332-472, gnl|xenTro1|scaffold_619 (269567-269471) | |
| 473-657, gnl|bosTau2|chr3 (75725115-75725299) | |
| 473-657, gnl|canFam2|chr15 (7908233-7908033) | |
| 473-657, gnl|canFam2|chr15 (7908235-7908053) | |
| 473-657, gnl|danRer3|chr16 (46181013-46181236) | |
| 473-657, gnl|danRer3|chr16 (46181042-46181219) | |
| 473-657, gnl|dasNov1|scaffold_27809 (11795-11586) | |
| 473-657, gnl|dasNov1|scaffold_60930 (1366-1549) | |
| 473-657, gnl|echTel1|scaffold_319625 (49838-49631) | |
| 473-657, gnl|echTel1|scaffold_319625 (49833-49651) | |
| 473-657, gnl|fr1|chrUn (99466313-99466533) | |
| 473-657, gnl|fr1|chrUn (99466336-99466513) | |
| 473-657, gnl|galGal2|chr23 (3290674-3290469) | |
| 473-657, gnl|hg17|chr1 (37721988-37722209) | |
| 473-657, gnl|Hg17|chr1 (37722189-37722005) | |
| 473-657, gnl|hg17|chr7 (49760727-49760914) | |
| 473-657, gnl|loxAfr1|scaffold_8071 (41508-41300) | |
| 473-657, gnl|loxAfr1|scaffold_8071 (41502-41320) | |
| 473-657, gnl|mm7|chr4 (124485779-124485566) | |
| 473-657, gnl|mm7|chr4 (124485765-124485586) | |
| 473-657, gnl|Mm7|chr4 (124485584-124485768) | |
| 473-657, gnl|monDom2|scaffold_43 (12076528-12076322) | |
| 473-657, gnl|monDom2|scaffold_43 (12076523-12076342) | |
| 473-657, gnl|panTro1|chr1 (38563444-38563665) | |
| 473-657, gnl|panTro1|chr6 (51358593-51358796) | |
| 473-657, gnl|rheMac2|chr1 (40451954-40452174) | |
| 473-657, gnl|rheMac2|chr3 (76450897-76450693) | |
| 473-657, gnl|rn3|chr5 (144394557-144394347) | |
| 473-657, gnl|rn3|chr5 (144394547-144394364) | |
| 473-657, gnl|tetNig1|chrUn_random (30691256-30691050) | |
| 473-657, gnl|tetNig1|chrUn_random (30691265-30691070) | |
| 473-657, gnl|xenTro1|scaffold_619 (275773-275563) | |
| 723-1263, gnl|bosTau2|chr3 (75729317-75729847) | |
| 723-1263, gnl|Hg17|chr1 (37717632-37717196) | |
| 723-1263, gnl|Mm7|chr4 (124488210-124488709) |
| Aligned organism(s): 68 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 6-152, gnl|bosTau2|chr3 (75717182-75717328) | |
| 6-152, gnl|Hg17|chr1 (37730598-37730453) | |
| 6-152, gnl|Mm7|chr4 (124474704-124474841) | |
| 332-472, gnl|bosTau2|chr3 (75721949-75722089) | |
| 332-472, gnl|canFam2|chr15 (7905532-7905415) | |
| 332-472, gnl|canFam2|chr15 (7905505-7905415) | |
| 332-472, gnl|danRer3|chr16 (46185417-46185534) | |
| 332-472, gnl|danRer3|chr16 (46185453-46185534) | |
| 332-472, gnl|dasNov1|scaffold_60930 (1551-1643) | |
| 332-472, gnl|dasNov1|scaffold_60930 (1552-1643) | |
| 332-472, gnl|echTel1|scaffold_319625 (45976-45859) | |
| 332-472, gnl|echTel1|scaffold_319625 (45948-45859) | |
| 332-472, gnl|fr1|chrUn (99467357-99467481) | |
| 332-472, gnl|fr1|chrUn (99467399-99467481) | |
| 332-472, gnl|galGal2|chr23 (3289375-3289279) | |
| 332-472, gnl|hg17|chr1 (37725375-37725492) | |
| 332-472, gnl|Hg17|chr1 (37725540-37725400) | |
| 332-472, gnl|hg17|chr7 (49760915-49761005) | |
| 332-472, gnl|mm7|chr4 (124482335-124482218) | |
| 332-472, gnl|mm7|chr4 (124482307-124482218) | |
| 332-472, gnl|Mm7|chr4 (124482168-124482308) | |
| 332-472, gnl|monDom2|scaffold_43 (12071949-12071832) | |
| 332-472, gnl|monDom2|scaffold_43 (12071922-12071832) | |
| 332-472, gnl|oryCun1|scaffold_201047 (99523-99643) | |
| 332-472, gnl|oryCun1|scaffold_201047 (99550-99643) | |
| 332-472, gnl|panTro1|chr1 (38566810-38566927) | |
| 332-472, gnl|panTro1|chr6 (51358797-51358885) | |
| 332-472, gnl|rheMac2|chr1 (40455025-40455142) | |
| 332-472, gnl|rheMac2|chr3 (76450692-76450602) | |
| 332-472, gnl|rn3|chr5 (144391258-144391141) | |
| 332-472, gnl|rn3|chr5 (144391230-144391141) | |
| 332-472, gnl|tetNig1|chrUn_random (30690602-30690506) | |
| 332-472, gnl|tetNig1|chrUn_random (30690593-30690506) | |
| 332-472, gnl|xenTro1|scaffold_619 (269567-269471) | |
| 473-657, gnl|bosTau2|chr3 (75725115-75725299) | |
| 473-657, gnl|canFam2|chr15 (7908233-7908033) | |
| 473-657, gnl|canFam2|chr15 (7908235-7908053) | |
| 473-657, gnl|danRer3|chr16 (46181013-46181236) | |
| 473-657, gnl|danRer3|chr16 (46181042-46181219) | |
| 473-657, gnl|dasNov1|scaffold_27809 (11795-11586) | |
| 473-657, gnl|dasNov1|scaffold_60930 (1366-1549) | |
| 473-657, gnl|echTel1|scaffold_319625 (49838-49631) | |
| 473-657, gnl|echTel1|scaffold_319625 (49833-49651) | |
| 473-657, gnl|fr1|chrUn (99466313-99466533) | |
| 473-657, gnl|fr1|chrUn (99466336-99466513) | |
| 473-657, gnl|galGal2|chr23 (3290674-3290469) | |
| 473-657, gnl|hg17|chr1 (37721988-37722209) | |
| 473-657, gnl|Hg17|chr1 (37722189-37722005) | |
| 473-657, gnl|hg17|chr7 (49760727-49760914) | |
| 473-657, gnl|loxAfr1|scaffold_8071 (41508-41300) | |
| 473-657, gnl|loxAfr1|scaffold_8071 (41502-41320) | |
| 473-657, gnl|mm7|chr4 (124485779-124485566) | |
| 473-657, gnl|mm7|chr4 (124485765-124485586) | |
| 473-657, gnl|Mm7|chr4 (124485584-124485768) | |
| 473-657, gnl|monDom2|scaffold_43 (12076528-12076322) | |
| 473-657, gnl|monDom2|scaffold_43 (12076523-12076342) | |
| 473-657, gnl|panTro1|chr1 (38563444-38563665) | |
| 473-657, gnl|panTro1|chr6 (51358593-51358796) | |
| 473-657, gnl|rheMac2|chr1 (40451954-40452174) | |
| 473-657, gnl|rheMac2|chr3 (76450897-76450693) | |
| 473-657, gnl|rn3|chr5 (144394557-144394347) | |
| 473-657, gnl|rn3|chr5 (144394547-144394364) | |
| 473-657, gnl|tetNig1|chrUn_random (30691256-30691050) | |
| 473-657, gnl|tetNig1|chrUn_random (30691265-30691070) | |
| 473-657, gnl|xenTro1|scaffold_619 (275773-275563) | |
| 723-1263, gnl|bosTau2|chr3 (75729317-75729847) | |
| 723-1263, gnl|Hg17|chr1 (37717632-37717196) | |
| 723-1263, gnl|Mm7|chr4 (124488210-124488709) |