Ss1.1-Pig4-TMW8033E05.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CTCCTCTCCTCCATACCTAATATTTAGGAACCTCTGCCAGATGCAAGAAGACAACAGCAG CTTCTCTCTGCTTCTGGATCTTCTCTCTGAGCTATATCAGAAGCAGCCCAAGATTGGCTA CCACCTGCTCTATTACCTAAGGGCCAGCAAAGCCGCCGCAGGAAAGATGAATCTGTATGA GTCATTTGCCCAGGCCACCCAGCTGGGTGATCTGCACACCTGCCTGATGATGGACATGAA GGCCTGCCAGGAGGACGACGTGCGGCTGCTGTGCCACCTCACACCGTCCATCTACACAGA GTTTCCAGACGAGACCTTGCGGAGCGGGGAGCTGCTGAACATGATCGTGGCTGTTATCGA CTCAGCGCAGCTCCAGGAGCTGGTCTGCCATGTGATGATGGGGAACCTGGTCATGTTTCG GAAAGACTCGGTCCTAAACATCCTCATCCAGAGCCTGGACTGGGAAACCTTTGAGCAGTA CTGTGCCTGGCAGCTCTTCCTGGCCCACAACATCCCCCTGGAGACCATAATCCCCATCCT GCAACACCTCAAGTACAAGGAGCACCCAGAGGCCCTGTCCTGCCTGCTGCTTCAGCTCCG CAGAGAGAAGCCCAGCGAAGAGATGGTGAAGATGGTGCTGAGCCGGCCCTGCCACCCAGA CGACCAGTTCACCACCAGCATCCTGAGGCACTGGTGTATGAAGCATGATGAACTGCTGGC TGAGCACATCAAGTCCCTGCTCATCAAGAACAACAGCCTCCCCCGCAAGAGGCAGAGCCT GAGGAGCTCCAGCAGCAAGCTGGCCCAGCTGACTCTGGAGCAGATCCTAGAGCACCTGGA CAACCTGCGTCTCAACCTGACCAACACCAAGCAGAACTTTTTCAGCCAGACCCCAATTCT GCAGGCTCTGCAGCATGTCCAGGCGAGCTGTGACGAAGCCCACAAGATGAAGTTCAGCGA TCTCTTCTCCTTGGCCGAGGAATACGAGGATTCTTCCACCAAGCCACCCAAGAGCCGACG AAAAGCAGCTCTGTCCAGCCCCCG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CTCCTCTCCTCCATACCTAATATTTAGGAACCTCTGCCAGATGCAAGAAGACAACAGCAG CTTCTCTCTGCTTCTGGATCTTCTCTCTGAGCTATATCAGAAGCAGCCCAAGATTGGCTA CCACCTGCTCTATTACCTAAGGGCCAGCAAAGCCGCCGCAGGAAAGATGAATCTGTATGA GTCATTTGCCCAGGCCACCCAGCTGGGTGATCTGCACACCTGCCTGATGATGGACATGAA GGCCTGCCAGGAGGACGACGTGCGGCTGCTGTGCCACCTCACACCGTCCATCTACACAGA GTTTCCAGACGAGACCTTGCGGAGCGGGGAGCTGCTGAACATGATCGTGGCTGTTATCGA CTCAGCGCAGCTCCAGGAGCTGGTCTGCCATGTGATGATGGGGAACCTGGTCATGTTTCG GAAAGACTCGGTCCTAAACATCCTCATCCAGAGCCTGGACTGGGAAACCTTTGAGCAGTA CTGTGCCTGGCAGCTCTTCCTGGCCCACAACATCCCCCTGGAGACCATAATCCCCATCCT GCAACACCTCAAGTACAAGGAGCACCCAGAGGCCCTGTCCTGCCTGCTGCTTCAGCTCCG CAGAGAGAAGCCCAGCGAAGAGATGGTGAAGATGGTGCTGAGCCGGCCCTGCCACCCAGA CGACCAGTTCACCACCAGCATCCTGAGGCACTGGTGTATGAAGCATGATGAACTGCTGGC TGAGCACATCAAGTCCCTGCTCATCAAGAACAACAGCCTCCCCCGCAAGAGGCAGAGCCT GAGGAGCTCCAGCAGCAAGCTGGCCCAGCTGACTCTGGAGCAGATCCTAGAGCACCTGGA CAACCTGCGTCTCAACCTGACCAACACCAAGCAGAACTTTTTCAGCCAGACCCCAATTCT GCAGGCTCTGCAGCATGTCCAGGCGAGCTGTGACGAAGCCCACAAGATGAAGTTCAGCGA TCTCTTCTCCTTGGCCGAGGAATACGAGGATTCTTCCACCAAGCCACCCAAGAGCCGACG AAAAGCAGCTCTGTCCAGCCCCCG |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 184-301, - strand, RNAz p=0.809423 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 184-301, - strand, RNAz p=0.809423 |
| Aligned organism(s): 23 entry(ies) | More info |
| Aligned organism(s): 23 entry(ies) | Help | Less info |
| 145-301, gnl|bosTau2|chr3 (7986016-7986172) | |
| 145-301, gnl|canFam2|chr7 (46305742-46305544) | |
| 145-301, gnl|danRer3|chrNA (18917455-18917626) | |
| 145-301, gnl|dasNov1|scaffold_76606 (6272-6076) | |
| 145-301, gnl|echTel1|scaffold_310951 (80914-80731) | |
| 145-301, gnl|fr1|chrUn (39655064-39654872) | |
| 145-301, gnl|hg17|chr1 (150553216-150553412) | |
| 145-301, gnl|Hg17|chr1 (150553220-150553376) | |
| 145-301, gnl|loxAfr1|scaffold_126058 (8650-8429) | |
| 145-301, gnl|mm7|chr3 (90527275-90527083) | |
| 145-301, gnl|Mm7|chr3 (90527269-90527113) | |
| 145-301, gnl|monDom2|scaffold_59 (4307668-4307459) | |
| 145-301, gnl|oryCun1|scaffold_101856 (3940-3742) | |
| 145-301, gnl|panTro1|chr1 (132533172-132533368) | |
| 145-301, gnl|rheMac2|chr1 (132280776-132280972) | |
| 145-301, gnl|rn3|chr2 (182605428-182605236) | |
| 145-301, gnl|tetNig1|chrUn_random (10258186-10258357) | |
| 443-560, gnl|bosTau2|chr3 (7988604-7988722) | |
| 443-560, gnl|Hg17|chr1 (150555743-150555860) | |
| 443-560, gnl|Mm7|chr3 (90524927-90524809) | |
| 610-777, gnl|bosTau2|chr3 (7990139-7990306) | |
| 610-777, gnl|Hg17|chr1 (150557345-150557512) | |
| 610-777, gnl|Mm7|chr3 (90523998-90523831) |
| Aligned organism(s): 23 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 145-301, gnl|bosTau2|chr3 (7986016-7986172) | |
| 145-301, gnl|canFam2|chr7 (46305742-46305544) | |
| 145-301, gnl|danRer3|chrNA (18917455-18917626) | |
| 145-301, gnl|dasNov1|scaffold_76606 (6272-6076) | |
| 145-301, gnl|echTel1|scaffold_310951 (80914-80731) | |
| 145-301, gnl|fr1|chrUn (39655064-39654872) | |
| 145-301, gnl|hg17|chr1 (150553216-150553412) | |
| 145-301, gnl|Hg17|chr1 (150553220-150553376) | |
| 145-301, gnl|loxAfr1|scaffold_126058 (8650-8429) | |
| 145-301, gnl|mm7|chr3 (90527275-90527083) | |
| 145-301, gnl|Mm7|chr3 (90527269-90527113) | |
| 145-301, gnl|monDom2|scaffold_59 (4307668-4307459) | |
| 145-301, gnl|oryCun1|scaffold_101856 (3940-3742) | |
| 145-301, gnl|panTro1|chr1 (132533172-132533368) | |
| 145-301, gnl|rheMac2|chr1 (132280776-132280972) | |
| 145-301, gnl|rn3|chr2 (182605428-182605236) | |
| 145-301, gnl|tetNig1|chrUn_random (10258186-10258357) | |
| 443-560, gnl|bosTau2|chr3 (7988604-7988722) | |
| 443-560, gnl|Hg17|chr1 (150555743-150555860) | |
| 443-560, gnl|Mm7|chr3 (90524927-90524809) | |
| 610-777, gnl|bosTau2|chr3 (7990139-7990306) | |
| 610-777, gnl|Hg17|chr1 (150557345-150557512) | |
| 610-777, gnl|Mm7|chr3 (90523998-90523831) |