Ss1.1-Pig4-TMW8034C17.5
|
CCACGGGGGCCACCGTTAGAGTCTCTCCACCACACCTGGGCTTCAAAAGTGTAACTTGGC
TGTACTATGGAGAATTTATGATAATGGAGAAAGAGCCATAGAAAGGAGACCATTATAGTG
GAGGAGAGGTGATGGGGGCAAGGACTACGGGTTGTACTGGACAGGAAAGACCTGGTTGAA
TTTCTGACATTTTGAAGGCAGAGACAACAGGATTTGCCAGCACATTTGGTATGTGGATTG
GATTGTTTGGTCAAAGGCCATGTGCATTTAACAAGTCATTATATAATGCACACGTTTTGA
TATTACTTTAGTGCTCTGCATATCATGCTTGCAAATTTTTGCCTATGATTTTCAGGGGTT
ATGAGAGCCATCCTGAAATCTATTCAGTTTAATACCCTTGTAATAGTAGTTACATTCATT
CTAAGTCATATTCTTTTTTTTTTTTTCTAAGTCATATTCTAACTTACTAAATTAATGATG
TAATCCAGAGAAAAGAAAATACAATCAAGATTATTCTGCCTTTTAGCACTTAAGGAATTA
CTAATATAAGACAATTGGTCTTTTACAGAATATTCAGGAATATACAGTCACTGAACAGCA
TAATCATGAAGACTTTGTAGCAAGATGGTTTGGGTACATTTAGGGGACAGAAGCCAAGTA
GGAAACTGAATGTACACCAACCAGTCCCCTTCTTTTCACACTTGACAAATTTCTAAAAAC
ATGTGCCAGAATCAACAAGAGATGTCCTGTTATGGTTTCTTTCTTAGGAAATAAAAAAAA
TTATATTAAATACTGAAATAAACCCTGTCTTCTTGCCATTGCCTTTAAGGATAGATGTCT
AGCATTTTGAACGTTCTTTGTTATTTTTATTCACAATTGAATTCACAGTTAATGGATTCT
AAGTCCAGCAAGAAACTCTTTTGAGGCTAAAGATTTGTCACTTTCTGGATGCCCAAAATA
TTTTTTACAAAATAGCTAGACACATTTCCTCACAGTGGCATCCAATTTATGAGACTTGTA
CTCCTCACGTTTGATACCAGCACATTCACTTTTCTACATTCACTCATTTTCACAGAATAG
AAAATATAAACTATAATAAATGGTTTTCAGGCCTTTAAATCCACAGAACCCTCAAAAGAA
ACTTTAACTTGAATCCCAATCTGC
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Blue-coloured subsequences are predicted RNA structures by RNAz
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CCACGGGGGCCACCGTTAGAGTCTCTCCACCACACCTGGGCTTCAAAAGTGTAACTTGGC
TGTACTATGGAGAATTTATGATAATGGAGAAAGAGCCATAGAAAGGAGACCATTATAGTG
GAGGAGAGGTGATGGGGGCAAGGACTACGGGTTGTACTGGACAGGAAAGACCTGGTTGAA
TTTCTGACATTTTGAAGGCAGAGACAACAGGATTTGCCAGCACATTTGGTATGTGGATTG
GATTGTTTGGTCAAAGGCCATGTGCATTTAACAAGTCATTATATAATGCACACGTTTTGA
TATTACTTTAGTGCTCTGCATATCATGCTTGCAAATTTTTGCCTATGATTTTCAGGGGTT
ATGAGAGCCATCCTGAAATCTATTCAGTTTAATACCCTTGTAATAGTAGTTACATTCATT
CTAAGTCATATTCTTTTTTTTTTTTTCTAAGTCATATTCTAACTTACTAAATTAATGATG
TAATCCAGAGAAAAGAAAATACAATCAAGATTATTCTGCCTTTTAGCACTTAAGGAATTA
CTAATATAAGACAATTGGTCTTTTACAGAATATTCAGGAATATACAGTCACTGAACAGCA
TAATCATGAAGACTTTGTAGCAAGATGGTTTGGGTACATTTAGGGGACAGAAGCCAAGTA
GGAAACTGAATGTACACCAACCAGTCCCCTTCTTTTCACACTTGACAAATTTCTAAAAAC
ATGTGCCAGAATCAACAAGAGATGTCCTGTTATGGTTTCTTTCTTAGGAAATAAAAAAAA
TTATATTAAATACTGAAATAAACCCTGTCTTCTTGCCATTGCCTTTAAGGATAGATGTCT
AGCATTTTGAACGTTCTTTGTTATTTTTATTCACAATTGAATTCACAGTTAATGGATTCT
AAGTCCAGCAAGAAACTCTTTTGAGGCTAAAGATTTGTCACTTTCTGGATGCCCAAAATA
TTTTTTACAAAATAGCTAGACACATTTCCTCACAGTGGCATCCAATTTATGAGACTTGTA
CTCCTCACGTTTGATACCAGCACATTCACTTTTCTACATTCACTCATTTTCACAGAATAG
AAAATATAAACTATAATAAATGGTTTTCAGGCCTTTAAATCCACAGAACCCTCAAAAGAA
ACTTTAACTTGAATCCCAATCTGC
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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
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83-285, gnl|bosTau2|chr27 (21663354-21663160) |
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83-285, gnl|dasNov1|scaffold_7981 (33661-33484) |
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83-285, gnl|echTel1|scaffold_311543 (44237-44053) |
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83-285, gnl|hg17|chr8 (38262412-38262619) |
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83-285, gnl|Hg17|chr8 (38262618-38262407) |
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83-285, gnl|loxAfr1|scaffold_2923 (13215-13418) |
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83-285, gnl|panTro1|chr7 (39644589-39644796) |
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83-285, gnl|rheMac2|chr8 (38741315-38741522) |
| |
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857-1159, gnl|bosTau2|chr27 (21662953-21662650) |
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857-1159, gnl|Hg17|chr8 (38261725-38261440) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
83-285, gnl|bosTau2|chr27 (21663354-21663160) |
|
83-285, gnl|dasNov1|scaffold_7981 (33661-33484) |
|
83-285, gnl|echTel1|scaffold_311543 (44237-44053) |
|
83-285, gnl|hg17|chr8 (38262412-38262619) |
|
83-285, gnl|Hg17|chr8 (38262618-38262407) |
|
83-285, gnl|loxAfr1|scaffold_2923 (13215-13418) |
|
83-285, gnl|panTro1|chr7 (39644589-39644796) |
|
83-285, gnl|rheMac2|chr8 (38741315-38741522) |
| |
|
857-1159, gnl|bosTau2|chr27 (21662953-21662650) |
|
857-1159, gnl|Hg17|chr8 (38261725-38261440) |