Non-Coding RNA Search

Ss1.1-Pig4-TMW8034M04.3

Sequence:


               
               TGCTATGGAACAGATGCCAGCACAGGCGCTTTATGTGCCTCAACTTTTTTATTGAATCTT
CCCAGTGAGTAGCTATCATAACCCCTATTTTATAAGTGATTGCTCATGAGGACTAAACAG
CTTGTCTGAGGTCACAGAGGTAGTGAGTGGCCAAGCAGAGATTCAATCCCAAGACTATCT
AGCTCCTTAGTCTATGCTCCTTCTATCACTTGACACTGGCGTTTATCATTTCTTGTTATT
GGTACATCAAAATAATTTCCTTCAATTGTAGAAGGAAAATTCTCTACATACAAACCCTCC
ATGTCCAAAGCTGGCTTTGTTATAAAGTTGTCCCCATTCATAACTGTCCCCTTCAAGAAG
ATTGCTGTGTGCCTTAAAGGCCAAATAGAAGTCCATGCTAATTAAAGTGTGGACAAGATT
TGCCAGAACATAATTAGCAAAATTCTCAAATTAGGGTGTGTCTCACACTAGTGAGTGCAG
GAAACAGTTTACTAATATTAGATTTCTTATACTGGTAGGAGAGAATAGGTCCTTCCAACC
CTGGCTGAACAAGGTCTCTGCTGTGAATTGAAGAGAGATAGAAATTCGGACACTCACTGC
TTTTTATAAAAATGGCAAACATTTGCTGAGTGCTAATTATATGACATGTATTGTGCTAAG
TGTTTTGCAACAGGCATCTTCCTTAAGTTCATGTGTCTCAACGGTGTAAGTATTGGTGTC
ATTTCCATTTTACAGATGCCCACACCTAGGCACTGGGTGGCAAAGTAACTTGCTTTACTC
ATGGAATCTGGCGAATGCCTCAACAGATCTGGATTCAAAAGGAGGCAATCTGATTTCTGA
GCTATAATCACTGCGATATAATTCCTTCCCCTCTCACTCTTAATCAAAGCAAAACGTTAC
TTCATACAAGCAGATTACTATCCTTCCAACAGGAACAACCACCCAAATCCTAGTTCCTAA
ATTGCTAGCAGTTCTTCCTATCGACCACTAGTTGGTGCTCTACCTGGGAAGAGTACACCT
TTCCCCCTCTAGTTGGACAAACACAAGCAAGCAAAGACTGTGAATATTATAATTCATGTA
CTGAAAGAACTAGAAATCAGTTTGGCATTTGGGAGCTGGATATTCCACTAAAAGAAAAGC
AATTACATAGAGCCCTTTAATCCTGTATATATTTTACCTGTACTGTAAATCTCCTTCATT
TTAAATCTGTCACTTGCTCTATAAAAATGCATAGAAAAAGAAGCCATAAAAAACTTAAAT
AAAAATTTTAGCCTAATGATATATTGATTGTGCATACATATCTTTATGTTTGCATATTCT
GTGTTGTGTAAAAAGGCCCATTAAAAGCTGAGTTTA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TGCTATGGAACAGATGCCAGCACAGGCGCTTTATGTGCCTCAACTTTTTTATTGAATCTT
CCCAGTGAGTAGCTATCATAACCCCTATTTTATAAGTGATTGCTCATGAGGACTAAACAG
CTTGTCTGAGGTCACAGAGGTAGTGAGTGGCCAAGCAGAGATTCAATCCCAAGACTATCT
AGCTCCTTAGTCTATGCTCCTTCTATCACTTGACACTGGCGTTTATCATTTCTTGTTATT
GGTACATCAAAATAATTTCCTTCAATTGTAGAAGGAAAATTCTCTACATACAAACCCTCC
ATGTCCAAAGCTGGCTTTGTTATAAAGTTGTCCCCATTCATAACTGTCCCCTTCAAGAAG
ATTGCTGTGTGCCTTAAAGGCCAAATAGAAGTCCATGCTAATTAAAGTGTGGACAAGATT
TGCCAGAACATAATTAGCAAAATTCTCAAATTAGGGTGTGTCTCACACTAGTGAGTGCAG
GAAACAGTTTACTAATATTAGATTTCTTATACTGGTAGGAGAGAATAGGTCCTTCCAACC
CTGGCTGAACAAGGTCTCTGCTGTGAATTGAAGAGAGATAGAAATTCGGACACTCACTGC
TTTTTATAAAAATGGCAAACATTTGCTGAGTGCTAATTATATGACATGTATTGTGCTAAG
TGTTTTGCAACAGGCATCTTCCTTAAGTTCATGTGTCTCAACGGTGTAAGTATTGGTGTC
ATTTCCATTTTACAGATGCCCACACCTAGGCACTGGGTGGCAAAGTAACTTGCTTTACTC
ATGGAATCTGGCGAATGCCTCAACAGATCTGGATTCAAAAGGAGGCAATCTGATTTCTGA
GCTATAATCACTGCGATATAATTCCTTCCCCTCTCACTCTTAATCAAAGCAAAACGTTAC
TTCATACAAGCAGATTACTATCCTTCCAACAGGAACAACCACCCAAATCCTAGTTCCTAA
ATTGCTAGCAGTTCTTCCTATCGACCACTAGTTGGTGCTCTACCTGGGAAGAGTACACCT
TTCCCCCTCTAGTTGGACAAACACAAGCAAGCAAAGACTGTGAATATTATAATTCATGTA
CTGAAAGAACTAGAAATCAGTTTGGCATTTGGGAGCTGGATATTCCACTAAAAGAAAAGC
AATTACATAGAGCCCTTTAATCCTGTATATATTTTACCTGTACTGTAAATCTCCTTCATT
TTAAATCTGTCACTTGCTCTATAAAAATGCATAGAAAAAGAAGCCATAAAAAACTTAAAT
AAAAATTTTAGCCTAATGATATATTGATTGTGCATACATATCTTTATGTTTGCATATTCT
GTGTTGTGTAAAAAGGCCCATTAAAAGCTGAGTTTA

Aligned organism(s): 6 entry(ies)

More info

Aligned organism(s): 6 entry(ies)

Help | Less info


               
               1-584, gnl|bosTau2|chr2 (40493040-40493596)
               

               
               1-584, gnl|Hg17|chr2 (133925681-133926248)
               


               
               593-883, gnl|bosTau2|chr2 (40493629-40493922)
               

               
               593-883, gnl|Hg17|chr2 (133926281-133926570)
               


               
               950-1356, gnl|bosTau2|chr2 (40494395-40494802)
               

               
               950-1356, gnl|Hg17|chr2 (133926649-133927008)

Aligned organism(s): 6 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-584, gnl|bosTau2|chr2 (40493040-40493596)
               

               
               1-584, gnl|Hg17|chr2 (133925681-133926248)
               


               
               593-883, gnl|bosTau2|chr2 (40493629-40493922)
               

               
               593-883, gnl|Hg17|chr2 (133926281-133926570)
               


               
               950-1356, gnl|bosTau2|chr2 (40494395-40494802)
               

               
               950-1356, gnl|Hg17|chr2 (133926649-133927008)

	1-584, gnl\|bosTau2\|chr2 (40493040-40493596)
	1-584, gnl\|Hg17\|chr2 (133925681-133926248)

	593-883, gnl\|bosTau2\|chr2 (40493629-40493922)
	593-883, gnl\|Hg17\|chr2 (133926281-133926570)

	950-1356, gnl\|bosTau2\|chr2 (40494395-40494802)
	950-1356, gnl\|Hg17\|chr2 (133926649-133927008)