Non-Coding RNA Search

Ss1.1-Pig4-TMW8034N20.5

Sequence:


               
               CTTTTATCATTTTCCAGTGTGCGGTGCTTAGCGTTTTATAGCAAGCGGGTGGTATTAATA
AGCTCTCTAAAAGTCACTCAGCAAAGCAGAAGGCTCTGCCTCCATAAAGCCGCGTCTGAA
GAACACCTTGAGTCGGGGCGCTTCCTTTGGTTTCAGATCGAATCTCTGGAGCACGACCTG
CAGGCCTCTGTGGACGAGCTTCAGGATGTGAAAGAAGAGCGGTCACGAGAACCGTATCAT
TGACGTGGACGCCCTGTGCATGGAGAACAGGTACCTTCAAGAGAGATTAAAGCAACTTCA
TGAAGAGGTCAACCTCTTGAAATCTAACATTGCCAAATACAAGAATGCTCTCGAGAGACG
GAAAAATTCCAAAGGCCAGGGTAAATCCAGCAGCAGTGCCTTGACTGGAGTCCTGTCGGC
AAAGCAAGTCCAGGACCTGCTCTCCGAGGATCACGGGTGCAGTCTCCCAGCCACTCCACA
GTCCATTTCTGATCTGAAATCTCTGGCAACAGCTCTGTTGGAGACGATCCATGAGAAAAA
CATGGTGATCCAGCACCAGAGGCAGACCAACAATATCTCCCTGTGGCCAAGGAATAAAAG
CCTCAACTTGTGCTTGCTTCGGCAGCACATATACTAAAATTGGAACGATGCAGAGAAGAT
CAGCACGGCCCCTGCGCAAGGATGACACGCAATTTCGTGAAGTGTTCCATATTTTTACTG
TACTACTGGAATTACGGACTGTTTGTAAAGGGGCAACCTGTGTAACCTGTGTGCCATGGT
GTGGATTGCCAAAGTATGCCAGCAGATATATTAAAAACCACTAATCATGGAACTCTCAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTTTTATCATTTTCCAGTGTGCGGTGCTTAGCGTTTTATAGCAAGCGGGTGGTATTAATA
AGCTCTCTAAAAGTCACTCAGCAAAGCAGAAGGCTCTGCCTCCATAAAGCCGCGTCTGAA
GAACACCTTGAGTCGGGGCGCTTCCTTTGGTTTCAGATCGAATCTCTGGAGCACGACCTG
CAGGCCTCTGTGGACGAGCTTCAGGATGTGAAAGAAGAGCGGTCACGAGAACCGTATCAT
TGACGTGGACGCCCTGTGCATGGAGAACAGGTACCTTCAAGAGAGATTAAAGCAACTTCA
TGAAGAGGTCAACCTCTTGAAATCTAACATTGCCAAATACAAGAATGCTCTCGAGAGACG
GAAAAATTCCAAAGGCCAGGGTAAATCCAGCAGCAGTGCCTTGACTGGAGTCCTGTCGGC
AAAGCAAGTCCAGGACCTGCTCTCCGAGGATCACGGGTGCAGTCTCCCAGCCACTCCACA
GTCCATTTCTGATCTGAAATCTCTGGCAACAGCTCTGTTGGAGACGATCCATGAGAAAAA
CATGGTGATCCAGCACCAGAGGCAGACCAACAATATCTCCCTGTGGCCAAGGAATAAAAG
CCTCAACTTGTGCTTGCTTCGGCAGCACATATACTAAAATTGGAACGATGCAGAGAAGAT
CAGCACGGCCCCTGCGCAAGGATGACACGCAATTTCGTGAAGTGTTCCATATTTTTACTG
TACTACTGGAATTACGGACTGTTTGTAAAGGGGCAACCTGTGTAACCTGTGTGCCATGGT
GTGGATTGCCAAAGTATGCCAGCAGATATATTAAAAACCACTAATCATGGAACTCTCAAA

Coded protein: 1 entry(ies)

More info

Coded protein: 1 entry(ies)

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               gi|50789890|ref|XP_427808.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|50789890|ref|XP_427808.1|

Aligned organism(s): 6 entry(ies)

More info

Aligned organism(s): 6 entry(ies)

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               567-720, gnl|bosTau2|chr23 (20545960-20545804)
               


               
               594-718, gnl|bosTau2|chr20 (39881896-39882020)
               


               
               595-717, gnl|bosTau2|chr10 (34335891-34335769)
               


               
               610-716, gnl|bosTau2|chr10 (7675620-7675514)
               

               
               610-716, gnl|Hg17|chr15 (65919437-65919331)
               

               
               610-716, gnl|Mm7|chr9 (63161638-63161744)

Aligned organism(s): 6 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               567-720, gnl|bosTau2|chr23 (20545960-20545804)
               


               
               594-718, gnl|bosTau2|chr20 (39881896-39882020)
               


               
               595-717, gnl|bosTau2|chr10 (34335891-34335769)
               


               
               610-716, gnl|bosTau2|chr10 (7675620-7675514)
               

               
               610-716, gnl|Hg17|chr15 (65919437-65919331)
               

               
               610-716, gnl|Mm7|chr9 (63161638-63161744)

	567-720, gnl\|bosTau2\|chr23 (20545960-20545804)

	594-718, gnl\|bosTau2\|chr20 (39881896-39882020)

	595-717, gnl\|bosTau2\|chr10 (34335891-34335769)

	610-716, gnl\|bosTau2\|chr10 (7675620-7675514)
	610-716, gnl\|Hg17\|chr15 (65919437-65919331)
	610-716, gnl\|Mm7\|chr9 (63161638-63161744)