Non-Coding RNA Search

Ss1.1-Pig4-TMW8034P08.5

Sequence:


               
               GCGGCTCGAGATTTTTCTCCATCCTGCATTTCCCTCAGGGCCCACCGCCGGGGGCGGCTA
CAGTGGCGGAGGGCTGGATGGCTGCCATGCTCCTTGTTGGCTGGAAGGGCAGGCACTGCA
TTTTTGGTCCTCGGCCCACCTGGGAGCAATCATCGCCACACACAAATCTCACTGCTCTTC
TTCTCTGCTTCATATCTGTCCACGTCTCCATGTAAGGTGTGCACTGATTTCCCCGCTGAG
GTCAACAGCTCTTGATGACCCCTTGGGTGTCCAGAGGAGCTGAAGATGGGCTGAACAAGC
ATGGCTCCTATGCCACCCCCCCTCCTTACAGCCAGAGGAGCCTGACTTACATCAGCCATA
CACAGAGGCAGTGTGACACTGAGAGGAAAGGCAAAGCTTTGAGAGCCAGTCTGCCCGAGT
TCAAATCTTATCTCTGCATCTCTCAAGCTGTGTGACCCTGGCCAGGTTACTCCACTTCTC
TGATCACTAGTTTGTAAATGGAACTAATGATATTCTTATCATGTACATGGTATGACATGG
AGCTAGTGAGATAGTTCCTATTTGCATGTGGAGCTAGTGGCAGTGCCTGCCTCCTAGGGT
TGCTGGGAGGATTAAATGAGTTTGTTCAGGAAATGCACTTAAGACAGTGCCTGGTGTGTA
GCAGATGTTCCGAAAGAGTTGGATATTATTGTAAATTACACTTGCAGGTAGGATTTCATT
TGCCTTGAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCGGCTCGAGATTTTTCTCCATCCTGCATTTCCCTCAGGGCCCACCGCCGGGGGCGGCTA
CAGTGGCGGAGGGCTGGATGGCTGCCATGCTCCTTGTTGGCTGGAAGGGCAGGCACTGCA
TTTTTGGTCCTCGGCCCACCTGGGAGCAATCATCGCCACACACAAATCTCACTGCTCTTC
TTCTCTGCTTCATATCTGTCCACGTCTCCATGTAAGGTGTGCACTGATTTCCCCGCTGAG
GTCAACAGCTCTTGATGACCCCTTGGGTGTCCAGAGGAGCTGAAGATGGGCTGAACAAGC
ATGGCTCCTATGCCACCCCCCCTCCTTACAGCCAGAGGAGCCTGACTTACATCAGCCATA
CACAGAGGCAGTGTGACACTGAGAGGAAAGGCAAAGCTTTGAGAGCCAGTCTGCCCGAGT
TCAAATCTTATCTCTGCATCTCTCAAGCTGTGTGACCCTGGCCAGGTTACTCCACTTCTC
TGATCACTAGTTTGTAAATGGAACTAATGATATTCTTATCATGTACATGGTATGACATGG
AGCTAGTGAGATAGTTCCTATTTGCATGTGGAGCTAGTGGCAGTGCCTGCCTCCTAGGGT
TGCTGGGAGGATTAAATGAGTTTGTTCAGGAAATGCACTTAAGACAGTGCCTGGTGTGTA
GCAGATGTTCCGAAAGAGTTGGATATTATTGTAAATTACACTTGCAGGTAGGATTTCATT
TGCCTTGAAAAA

Aligned organism(s): 8 entry(ies)

More info

Aligned organism(s): 8 entry(ies)

Help | Less info


               
               237-413, gnl|bosTau2|chr15 (46340260-46340083)
               

               
               237-413, gnl|hg17|chr11 (44517601-44517782)
               

               
               237-413, gnl|Hg17|chr11 (44517782-44517607)
               

               
               237-413, gnl|monDom2|scaffold_4 (118341685-118341863)
               

               
               237-413, gnl|oryCun1|scaffold_160900 (6745-6573)
               

               
               237-413, gnl|panTro1|chr9 (45019542-45019720)
               

               
               237-413, gnl|rheMac2|chr14 (27562976-27562798)
               


               
               520-728, gnl|bosTau2|chr15 (46339562-46339355)

Aligned organism(s): 8 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               237-413, gnl|bosTau2|chr15 (46340260-46340083)
               

               
               237-413, gnl|hg17|chr11 (44517601-44517782)
               

               
               237-413, gnl|Hg17|chr11 (44517782-44517607)
               

               
               237-413, gnl|monDom2|scaffold_4 (118341685-118341863)
               

               
               237-413, gnl|oryCun1|scaffold_160900 (6745-6573)
               

               
               237-413, gnl|panTro1|chr9 (45019542-45019720)
               

               
               237-413, gnl|rheMac2|chr14 (27562976-27562798)
               


               
               520-728, gnl|bosTau2|chr15 (46339562-46339355)

	237-413, gnl\|bosTau2\|chr15 (46340260-46340083)
	237-413, gnl\|hg17\|chr11 (44517601-44517782)
	237-413, gnl\|Hg17\|chr11 (44517782-44517607)
	237-413, gnl\|monDom2\|scaffold_4 (118341685-118341863)
	237-413, gnl\|oryCun1\|scaffold_160900 (6745-6573)
	237-413, gnl\|panTro1\|chr9 (45019542-45019720)
	237-413, gnl\|rheMac2\|chr14 (27562976-27562798)

	520-728, gnl\|bosTau2\|chr15 (46339562-46339355)