Non-Coding RNA Search

Ss1.1-Pig4-TMW8035E09.3

Sequence:


               
               CTCCTAATTGGTCTTTTTTTGTTAAAAGTATCTCTTTTCAGCTTTATAACTGATGAAGGA
CTCCTTGAAAGCTCTTTTGTGTTTGTTAATTTTGAAGGAAGTGAGATAACTATTTCCCTC
CCATTTCCTTTGTGAGCCTTTTTCCCCATTAGCCATGGCCAATCTTGGTTTCCTCTGGTA
TATTTCAGTCTCATCCTTATCTCATGAAATTGAAGGAGCTAGCACGCTTAAAAAATTAGT
TCCAGGCGTGTTTGTGCATTGATAATCTGCCGACTAATTGATAATCATTCAACAGTGAAC
CTGTGGACAAGATGTGATCAACTGGGGAGTAAAGGCTACTGTGCTTTCTGTTTGGTAAAG
GACTCTTGTTGAGGTATGAATTGTGCATTGTTTTTGTTTTGTTTTTGGCCGCACTTGTGG
CATGTCGAAGTTATACGGATCCAATCCGTGCCACGGCAGTGTACAACGCCGGATCCTTAA
CCCACTGAGCCACCAGGGAATTCCTCAGTTCTGCACTGCAGGCAAAATGATTTTAGGTAT
CTTTTTATACTTGTCCGTACTTGTAATTTTTTTATTAAAGTGCTTTACAATGTTCTTTCA
ATTTTTGTTTTACAGCAAAGTGATCCAGTCATACATAAACCCCAGACTTCCCCCCTTCCC
CTCCGCCCCCGCCCTGGCTAACACAAGTCTGTCCTCCATGTCCATGATCTGTTTCTGTTT
TGTAGATAGACCATTTGTGCCATATTTTAGACTCCACATACCAAAATGTAATAAAATCCA
TCCCACTCCTTC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTCCTAATTGGTCTTTTTTTGTTAAAAGTATCTCTTTTCAGCTTTATAACTGATGAAGGA
CTCCTTGAAAGCTCTTTTGTGTTTGTTAATTTTGAAGGAAGTGAGATAACTATTTCCCTC
CCATTTCCTTTGTGAGCCTTTTTCCCCATTAGCCATGGCCAATCTTGGTTTCCTCTGGTA
TATTTCAGTCTCATCCTTATCTCATGAAATTGAAGGAGCTAGCACGCTTAAAAAATTAGT
TCCAGGCGTGTTTGTGCATTGATAATCTGCCGACTAATTGATAATCATTCAACAGTGAAC
CTGTGGACAAGATGTGATCAACTGGGGAGTAAAGGCTACTGTGCTTTCTGTTTGGTAAAG
GACTCTTGTTGAGGTATGAATTGTGCATTGTTTTTGTTTTGTTTTTGGCCGCACTTGTGG
CATGTCGAAGTTATACGGATCCAATCCGTGCCACGGCAGTGTACAACGCCGGATCCTTAA
CCCACTGAGCCACCAGGGAATTCCTCAGTTCTGCACTGCAGGCAAAATGATTTTAGGTAT
CTTTTTATACTTGTCCGTACTTGTAATTTTTTTATTAAAGTGCTTTACAATGTTCTTTCA
ATTTTTGTTTTACAGCAAAGTGATCCAGTCATACATAAACCCCAGACTTCCCCCCTTCCC
CTCCGCCCCCGCCCTGGCTAACACAAGTCTGTCCTCCATGTCCATGATCTGTTTCTGTTT
TGTAGATAGACCATTTGTGCCATATTTTAGACTCCACATACCAAAATGTAATAAAATCCA
TCCCACTCCTTC

Aligned organism(s): 4 entry(ies)

More info

Aligned organism(s): 4 entry(ies)

Help | Less info


               
               2-253, gnl|bosTau2|chr18 (1864676-1864921)
               

               
               2-253, gnl|Hg17|chr16 (73979432-73979203)
               


               
               638-760, gnl|bosTau2|chr20 (39398523-39398399)
               


               
               641-759, gnl|bosTau2|chr11 (50778347-50778227)

Aligned organism(s): 4 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               2-253, gnl|bosTau2|chr18 (1864676-1864921)
               

               
               2-253, gnl|Hg17|chr16 (73979432-73979203)
               


               
               638-760, gnl|bosTau2|chr20 (39398523-39398399)
               


               
               641-759, gnl|bosTau2|chr11 (50778347-50778227)

	2-253, gnl\|bosTau2\|chr18 (1864676-1864921)
	2-253, gnl\|Hg17\|chr16 (73979432-73979203)

	638-760, gnl\|bosTau2\|chr20 (39398523-39398399)

	641-759, gnl\|bosTau2\|chr11 (50778347-50778227)