Ss1.1-Pig4-TMW8037G14.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GTTACCTAAGCCAGAGCGGGGCAAGATGAGGGTGCATAAGATCAACAATGTGAACAAGGC ACTGGACTTCATCGCCAGCAAAGGAGTCAAGCTGGTCTCCATCGGGGCGGAAGGTGAGCT TGGCTGGGGCCCAACCTCTGCCTTCTGAACAGAGGTGGTGGTGGTGGTAGAGAGAGCACC AGGGGTGCTTAAAGCCCAGCTGTACCCAGCAGCCACCACGGTGACTGCCTTCGATGTGAC CTGGGGCACAGGGAGGGGAATAGCCTCACCTCGGACCCTGGACACCCCCACTCGCCCTCC TGGTGCTGGGCCTGAGGGACATGTGGCTGACATCTCTGAGCCGGGAGTACATTTGCCCCA AGGCCTTGCCCGTTGTGTGTGGGCAGGAAGGGGTCGGCGGGGGAAGGCCGCTGGAGGCCC TGTGTCAGGGCTCTGGACAGGGAGTGTAAGTCCGAAGGCCAGTGACCAGACAGACGTTGC TGTTTGTCCTCATGGCCTGGGAGAGTGTGGCCTCCTGACTGATACTCGGGATCCTTCTGA GCCCCGTGCAGAGACCCAGGCCTGCGACCCTTCGTTCCAGTGGCAGGGTCTTGTCCTGAG CTCACAGGCGCCTTTGGAGACCAGGCGAGGCCGGATGGAGCCCAGCAGCTCGCCGTCAGC CTGGGCTCAGGCTTCTGCTCATTAGCTAGAGCAGGGTTTCCTTTGCCCTGACATCCATGT TGTCCCAGCTTTTAGAAAAACAAAGAAAACTAATTGCTGTTAATGACAGGGCTCTGAGAG TTTGGCCAGGACTCTGGGCCAGAACGCAGACCGCTCCAAGGCCCTGCCCCCGCGGGGCCC TCTCCAGGGAGGGGTGCCAAGCCCCGAATGCCACGGTCGAGGTGGTTGGTGTTGTTTAAA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GTTACCTAAGCCAGAGCGGGGCAAGATGAGGGTGCATAAGATCAACAATGTGAACAAGGC ACTGGACTTCATCGCCAGCAAAGGAGTCAAGCTGGTCTCCATCGGGGCGGAAGGTGAGCT TGGCTGGGGCCCAACCTCTGCCTTCTGAACAGAGGTGGTGGTGGTGGTAGAGAGAGCACC AGGGGTGCTTAAAGCCCAGCTGTACCCAGCAGCCACCACGGTGACTGCCTTCGATGTGAC CTGGGGCACAGGGAGGGGAATAGCCTCACCTCGGACCCTGGACACCCCCACTCGCCCTCC TGGTGCTGGGCCTGAGGGACATGTGGCTGACATCTCTGAGCCGGGAGTACATTTGCCCCA AGGCCTTGCCCGTTGTGTGTGGGCAGGAAGGGGTCGGCGGGGGAAGGCCGCTGGAGGCCC TGTGTCAGGGCTCTGGACAGGGAGTGTAAGTCCGAAGGCCAGTGACCAGACAGACGTTGC TGTTTGTCCTCATGGCCTGGGAGAGTGTGGCCTCCTGACTGATACTCGGGATCCTTCTGA GCCCCGTGCAGAGACCCAGGCCTGCGACCCTTCGTTCCAGTGGCAGGGTCTTGTCCTGAG CTCACAGGCGCCTTTGGAGACCAGGCGAGGCCGGATGGAGCCCAGCAGCTCGCCGTCAGC CTGGGCTCAGGCTTCTGCTCATTAGCTAGAGCAGGGTTTCCTTTGCCCTGACATCCATGT TGTCCCAGCTTTTAGAAAAACAAAGAAAACTAATTGCTGTTAATGACAGGGCTCTGAGAG TTTGGCCAGGACTCTGGGCCAGAACGCAGACCGCTCCAAGGCCCTGCCCCCGCGGGGCCC TCTCCAGGGAGGGGTGCCAAGCCCCGAATGCCACGGTCGAGGTGGTTGGTGTTGTTTAAA |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 602-801, - strand, RNAz p=0.941601 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 602-801, - strand, RNAz p=0.941601 |
| Aligned organism(s): 25 entry(ies) | More info |
| Aligned organism(s): 25 entry(ies) | Help | Less info |
| 1-132, gnl|bosTau2|chr18 (40830402-40830271) | |
| 1-132, gnl|canFam2|chr1 (117292268-117292135) | |
| 1-132, gnl|danRer3|chr13 (39015753-39015619) | |
| 1-132, gnl|dasNov1|scaffold_15332 (9089-8955) | |
| 1-132, gnl|echTel1|scaffold_292368 (46315-46180) | |
| 1-132, gnl|fr1|chrUn (57080473-57080601) | |
| 1-132, gnl|galGal2|chrUn (154270005-154269871) | |
| 1-132, gnl|hg17|chr19 (43883476-43883610) | |
| 1-132, gnl|Hg17|chr19 (43883489-43883612) | |
| 1-132, gnl|loxAfr1|scaffold_47645 (6572-6439) | |
| 1-132, gnl|mm7|chr7 (25853267-25853134) | |
| 1-132, gnl|Mm7|chr7 (25853253-25853127) | |
| 1-132, gnl|monDom2|scaffold_139 (709503-709636) | |
| 1-132, gnl|oryCun1|scaffold_189973 (17217-17079) | |
| 1-132, gnl|panTro1|chr20 (40797243-40797377) | |
| 1-132, gnl|rheMac2|chr19 (45040928-45041062) | |
| 1-132, gnl|rn3|chr1 (84103945-84103812) | |
| 1-132, gnl|tetNig1|chr16 (6748621-6748753) | |
| 1-132, gnl|xenTro1|scaffold_1700 (111048-110920) | |
| 8-118, gnl|bosTau2|chr10 (55198148-55198038) | |
| 8-118, gnl|Hg17|chr14 (68457581-68457475) | |
| 8-118, gnl|Mm7|chr12 (78167845-78167735) | |
| 564-900, gnl|bosTau2|chr18 (40829625-40829280) | |
| 564-900, gnl|Hg17|chr19 (43884201-43884521) | |
| 564-900, gnl|Mm7|chr7 (25852724-25852421) |
| Aligned organism(s): 25 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-132, gnl|bosTau2|chr18 (40830402-40830271) | |
| 1-132, gnl|canFam2|chr1 (117292268-117292135) | |
| 1-132, gnl|danRer3|chr13 (39015753-39015619) | |
| 1-132, gnl|dasNov1|scaffold_15332 (9089-8955) | |
| 1-132, gnl|echTel1|scaffold_292368 (46315-46180) | |
| 1-132, gnl|fr1|chrUn (57080473-57080601) | |
| 1-132, gnl|galGal2|chrUn (154270005-154269871) | |
| 1-132, gnl|hg17|chr19 (43883476-43883610) | |
| 1-132, gnl|Hg17|chr19 (43883489-43883612) | |
| 1-132, gnl|loxAfr1|scaffold_47645 (6572-6439) | |
| 1-132, gnl|mm7|chr7 (25853267-25853134) | |
| 1-132, gnl|Mm7|chr7 (25853253-25853127) | |
| 1-132, gnl|monDom2|scaffold_139 (709503-709636) | |
| 1-132, gnl|oryCun1|scaffold_189973 (17217-17079) | |
| 1-132, gnl|panTro1|chr20 (40797243-40797377) | |
| 1-132, gnl|rheMac2|chr19 (45040928-45041062) | |
| 1-132, gnl|rn3|chr1 (84103945-84103812) | |
| 1-132, gnl|tetNig1|chr16 (6748621-6748753) | |
| 1-132, gnl|xenTro1|scaffold_1700 (111048-110920) | |
| 8-118, gnl|bosTau2|chr10 (55198148-55198038) | |
| 8-118, gnl|Hg17|chr14 (68457581-68457475) | |
| 8-118, gnl|Mm7|chr12 (78167845-78167735) | |
| 564-900, gnl|bosTau2|chr18 (40829625-40829280) | |
| 564-900, gnl|Hg17|chr19 (43884201-43884521) | |
| 564-900, gnl|Mm7|chr7 (25852724-25852421) |