Non-Coding RNA Search

Ss1.1-Pig4-TMW8037G16.3

Sequence:


               
               GCGGCTCGAGAGAAACTGAGAGCTTTTGAGAGGGGACCTAGGTGACTGGATAGGCATCAT
ATATTCATTGTAGTGCCTTTTATATTTTGAGTCATTTATTTGTGTTACCTGTTTGGGAGA
AGTTGATGAATTCAAATGACAAATTAATTCCTGTTGGTCATAAGAAAATAATGGCTCAGA
TGAATTGCAAAAAATTCTTAAGGGCAATAAAGAGAGGCTGTAGTGATATGGGAGAATAGT
GAAGACTGGAATACATTTGTTTTTAGAGGAAACAGAAAGGTCATCTGTAAGATATAGGTA
GTTCTTGACAAGCAGAAAAAGTTTGAGAATCACAGATTTAAAATGACTTATTAAATCAGT
TAACTATTTATTTCAGAACACGAAAGATCTTCAGACTACACTGAATATCTTAAGCATTCT
TGTTGAGCTGGTGTCAGCTGGTGGAGGTCGGAGAGCGAGTTTCTTAGTCTCCAAAGGTGG
TTCACAAATATTATTACAGTTACTTATGAATGCCAGCAAAGAATCTCCCCTGAATGAGGA
GTTAATGGTGCAGATTCATTCTATTCTTGCAAAGATTGGGCCAAAAGACAAAAAATTTGG
AGCGAAAGCTAGAATTAATGGCGCTCTAAATATAACCTTGAATTTGGTCAAACAGAATTT
GCAGAATCATCGCTTGGTTTTGCCTTGCCTTCAGCTTTTACGAGTATATTCCGCCAACTG
TGAGTATTTCAGAACAGCTTTTTAGTTAACTCCATGTTGTGAAGTGACACGAAATCAAAA
TTTTAAAGTACGTTAGCTCCGTAACTCTCTGAAATCTCTAGACAAGGAAAGAGAATATTT
AATATGGCTCTTTGTAATCCTAACCCACCTCATTCCCACCCCGACCCC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCGGCTCGAGAGAAACTGAGAGCTTTTGAGAGGGGACCTAGGTGACTGGATAGGCATCAT
ATATTCATTGTAGTGCCTTTTATATTTTGAGTCATTTATTTGTGTTACCTGTTTGGGAGA
AGTTGATGAATTCAAATGACAAATTAATTCCTGTTGGTCATAAGAAAATAATGGCTCAGA
TGAATTGCAAAAAATTCTTAAGGGCAATAAAGAGAGGCTGTAGTGATATGGGAGAATAGT
GAAGACTGGAATACATTTGTTTTTAGAGGAAACAGAAAGGTCATCTGTAAGATATAGGTA
GTTCTTGACAAGCAGAAAAAGTTTGAGAATCACAGATTTAAAATGACTTATTAAATCAGT
TAACTATTTATTTCAGAACACGAAAGATCTTCAGACTACACTGAATATCTTAAGCATTCT
TGTTGAGCTGGTGTCAGCTGGTGGAGGTCGGAGAGCGAGTTTCTTAGTCTCCAAAGGTGG
TTCACAAATATTATTACAGTTACTTATGAATGCCAGCAAAGAATCTCCCCTGAATGAGGA
GTTAATGGTGCAGATTCATTCTATTCTTGCAAAGATTGGGCCAAAAGACAAAAAATTTGG
AGCGAAAGCTAGAATTAATGGCGCTCTAAATATAACCTTGAATTTGGTCAAACAGAATTT
GCAGAATCATCGCTTGGTTTTGCCTTGCCTTCAGCTTTTACGAGTATATTCCGCCAACTG
TGAGTATTTCAGAACAGCTTTTTAGTTAACTCCATGTTGTGAAGTGACACGAAATCAAAA
TTTTAAAGTACGTTAGCTCCGTAACTCTCTGAAATCTCTAGACAAGGAAAGAGAATATTT
AATATGGCTCTTTGTAATCCTAACCCACCTCATTCCCACCCCGACCCC

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|55661112|emb|CAH71212.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|55661112|emb|CAH71212.1|

Aligned organism(s): 5 entry(ies)

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Aligned organism(s): 5 entry(ies)

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               24-442, gnl|bosTau2|chr8 (42568338-42567934)
               

               
               24-442, gnl|Hg17|chr9 (85523219-85522802)
               


               
               583-865, gnl|bosTau2|chr8 (42564984-42564702)
               

               
               583-865, gnl|Hg17|chr9 (85517155-85516871)
               

               
               583-865, gnl|Mm7|chr13 (58636948-58636687)

Aligned organism(s): 5 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               24-442, gnl|bosTau2|chr8 (42568338-42567934)
               

               
               24-442, gnl|Hg17|chr9 (85523219-85522802)
               


               
               583-865, gnl|bosTau2|chr8 (42564984-42564702)
               

               
               583-865, gnl|Hg17|chr9 (85517155-85516871)
               

               
               583-865, gnl|Mm7|chr13 (58636948-58636687)

	24-442, gnl\|bosTau2\|chr8 (42568338-42567934)
	24-442, gnl\|Hg17\|chr9 (85523219-85522802)

	583-865, gnl\|bosTau2\|chr8 (42564984-42564702)
	583-865, gnl\|Hg17\|chr9 (85517155-85516871)
	583-865, gnl\|Mm7\|chr13 (58636948-58636687)