Ss1.1-Pig4-TMW8037H10.5
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GGGACATCTTGGGGGGGGGGTAATTATTGCCTACCATAGGTACAAAGGTCCTTTCTACAC
TAAATACAATAACTAGATATTTTAGGACTCTTTCCATTGCAAGAAACAGGATCTAACTCA
AGCTTAAAAGAAGAAAAGGATTTTGCTGGCTTATATACTTGGAAGAAATAGGTGATTGGC
TTCAAGTACAGCTGGCTCCCCATGTCTGACAAGGCCACCAAGGCACTCAGTTTCTTGGCT
TGGCATTCTTTGTGTTGGTTTACCTCTCAAGCACAGGCTATCTGCATGGTGGCTGAGATA
GCTCCCAGGCAACAGCAAGCTTACAAAGCTCTCAAGACTTGGGATCCCAGAGAGGATACC
ATGACTTCTTTTTCGGTAGTGCCAACACAATCCTGAGGATGACTCTCATTGGCCCGTCTT
GGGTCACATGTTCATCCCTAGACCAGTCACTATTCAGGGGGAGGCAGTACATCTCTCACT
CTGACCATGGATGAGTCAGCCTCACCAGAGTACAGGTACTGAGTGGGGGAGGGAAAGGTA
TGCCAGAAGAAAGCCGGATGTTGTTACCCAAAGGAGGTAGGGAGTTGGGCAGGCAAAAAC
CACTGGTGTGCATGGCGGCACCTCACAGCTGGATTTCAGAACCACACAGTTGATGCATTA
TTCCAGTTCAGCGCTCATTTGGCTTCAAGCAAGAGGACACTCAAACTTGAAAGAAGACAG
AGGAGGCTTCCTCAGGGCAAGTAGTAAGTTGATTCAGGTAGCATATAAGAGGAGCTGCAT
CGTGGTTGAGAGTCTGGGTTTTGAAACCAGACTGTTTAGGTTTACATCCAACTTATTGGT
TGTGTTTACTTG------------CTCAGCTTCCTCATCTGTGAAATGTGGTTAATAATA
ATACCCACCAGAAAGTTCCCTGGTGGTCTAGTGGTAAGGACTCAGTGCTTTCACTGCTTT
GGCCCAGGTTCAGTCCCAGATCTGGGAACTGAGATCCCACATCGGTCTGCTGCACACTGC
AGCCAAACAACAACAACAGCAAAAACTTAAGTGTGAATAAAATAGAGTAAGAAAAAAATA
ATAATAGCACCCACCCCATGAGCTCACTGTGAAGTTTAAATGTGTTAATACAAATAAAGT
GCTTAGAACAGTTCTTTGACATAAAGGAAACACTCAAAAAGTAATAACCTCAGTAATGAT
TATCATTGCTGTGTAGCTATTGTGATTGTTAATAAGCTTCCTGGAATT------------
------------------------------------------------------------
------------------------CGGTCTGCTGCACACTGCAGCCAAACAACAACAACA
GCAAAAACTTAAGTGTGAATAAAATAGAGTAAGAAAAAAATAATAATAGCACCCACCCCA
TGAGCTCACTGTGAAGTTTAAATGTGTTAATACAAATAAAGTGCTTAGAACAGTTCTTTG
ACATAAAGGAAACACTCAAAAAGTAATAACCTCAGTAATGATTATCATTGCTGTGTAGCT
ATTGTGATTGTTAATAAGCTTCCTGGAATTCCCTTG
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Blue-coloured subsequences are predicted RNA structures by RNAz
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GGGACATCTTGGGGGGGGGGTAATTATTGCCTACCATAGGTACAAAGGTCCTTTCTACAC
TAAATACAATAACTAGATATTTTAGGACTCTTTCCATTGCAAGAAACAGGATCTAACTCA
AGCTTAAAAGAAGAAAAGGATTTTGCTGGCTTATATACTTGGAAGAAATAGGTGATTGGC
TTCAAGTACAGCTGGCTCCCCATGTCTGACAAGGCCACCAAGGCACTCAGTTTCTTGGCT
TGGCATTCTTTGTGTTGGTTTACCTCTCAAGCACAGGCTATCTGCATGGTGGCTGAGATA
GCTCCCAGGCAACAGCAAGCTTACAAAGCTCTCAAGACTTGGGATCCCAGAGAGGATACC
ATGACTTCTTTTTCGGTAGTGCCAACACAATCCTGAGGATGACTCTCATTGGCCCGTCTT
GGGTCACATGTTCATCCCTAGACCAGTCACTATTCAGGGGGAGGCAGTACATCTCTCACT
CTGACCATGGATGAGTCAGCCTCACCAGAGTACAGGTACTGAGTGGGGGAGGGAAAGGTA
TGCCAGAAGAAAGCCGGATGTTGTTACCCAAAGGAGGTAGGGAGTTGGGCAGGCAAAAAC
CACTGGTGTGCATGGCGGCACCTCACAGCTGGATTTCAGAACCACACAGTTGATGCATTA
TTCCAGTTCAGCGCTCATTTGGCTTCAAGCAAGAGGACACTCAAACTTGAAAGAAGACAG
AGGAGGCTTCCTCAGGGCAAGTAGTAAGTTGATTCAGGTAGCATATAAGAGGAGCTGCAT
CGTGGTTGAGAGTCTGGGTTTTGAAACCAGACTGTTTAGGTTTACATCCAACTTATTGGT
TGTGTTTACTTG------------CTCAGCTTCCTCATCTGTGAAATGTGGTTAATAATA
ATACCCACCAGAAAGTTCCCTGGTGGTCTAGTGGTAAGGACTCAGTGCTTTCACTGCTTT
GGCCCAGGTTCAGTCCCAGATCTGGGAACTGAGATCCCACATCGGTCTGCTGCACACTGC
AGCCAAACAACAACAACAGCAAAAACTTAAGTGTGAATAAAATAGAGTAAGAAAAAAATA
ATAATAGCACCCACCCCATGAGCTCACTGTGAAGTTTAAATGTGTTAATACAAATAAAGT
GCTTAGAACAGTTCTTTGACATAAAGGAAACACTCAAAAAGTAATAACCTCAGTAATGAT
TATCATTGCTGTGTAGCTATTGTGATTGTTAATAAGCTTCCTGGAATT------------
------------------------------------------------------------
------------------------CGGTCTGCTGCACACTGCAGCCAAACAACAACAACA
GCAAAAACTTAAGTGTGAATAAAATAGAGTAAGAAAAAAATAATAATAGCACCCACCCCA
TGAGCTCACTGTGAAGTTTAAATGTGTTAATACAAATAAAGTGCTTAGAACAGTTCTTTG
ACATAAAGGAAACACTCAAAAAGTAATAACCTCAGTAATGATTATCATTGCTGTGTAGCT
ATTGTGATTGTTAATAAGCTTCCTGGAATTCCCTTG
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917-988, tRNA Pseudo : RF00005;tRNA; (AF271936.1/68-140), RaveNnA Score=26.02 |
PigEST conread start position and end position of sequence/structure similarity to an annotated RNA family,
RNA family (possibly sequence identifier),
blast E-value (sequence sim.) or RaveNnA score (structure sim.)
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917-988, tRNA Pseudo : RF00005;tRNA; (AF271936.1/68-140), RaveNnA Score=26.02 |
