Ss1.1-Pig4-TMW8037K14.5
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CTACTGGACCTGCCGCTGGCCTCTGAGCGGCTGTGGAGCGGCGTTGGGCGCGCCCTGGGA
CCCTCACAGCGCTCTCCGAAGGACACTTTCGGGCCCGGGTCCCGAGGCTCCGGCCGCAGA
CCCGAGGAGGAAAGGACCTATTCTCCGTTCTTTTTCAGCATCCCGGTCTTTCCCTCTTCT
CTGCCCAGCATGGCCCGAAACGACAGGAGAGCCTCTTCTGGATCGGCCTTTCCAACCGCG
GGCTGGAAGGATTCTGCATGAGGATGGATTCGCCGGTTTCTCGGGACCCACGCACAGCAG
GCATTTAGAGTTAGGCTGCTGCTCTTATTTAAAGAGGGCTGAGAACACCCGCAATCTGTT
AGGAAGAAGTTCAGTTAGAAGACTTTCTTCACATCTTGAGAAAGAAGGGATTGAACCCCT
TTCCTTTAGAGAACAGCCCTCTATTTCGTCTGGGGCTCGTTACAGCAAGCACAGCTGAGG
ACTGCCTCCAGGAATCTAGAAGAGCTTCCAGTGGAGCCCATGGAAGAATTGAAAGAAGTG
GAAAATTATGCAAACCGCGTCTGTAACTTACCAGAGGCAAAAGAAGCATTTTCTCATGGT
TGTGAAAAGGAAAGCAGACAGCCTAGACATGAGTTTAAAGAGTTCCAACTCAAACCAGGA
GAAATTTGAACAAATCTACCAGCCTCTGCAAAGGGAACATCAGAGACATCAAGAACCTGC
ACATCAGTCTAGAAAAAATTTGAGCGAGATGCACGATGAAGACCCAGGAAAAGATAAAAC
GTCGCAAAACTGCGTGGAGAGAGATTTGGAGCACGCCGCAAGGAGCCTGGGGACGGCCGG
TGAGGAGATCCGCAGGCTCCCCGCCCAGGAACCGCAAGGCCAGGGGGAAGAGCAGCGCGA
ATTAGATTCTGCATTTGAGAAGTCTCAACTAGAAGTTGAGAAATTAAAAGAACTTTTGAA
AGAGCTGAAAGAAAATGGCTCAGCTGACTTACAGAAAGCAAAGGAACATAACCGGAGACT
GGATGAGGAAATTCTGGCTTTAAGGAATCGGGTTCGATCACTTGACTCAGAAAAAAAAGT
ACTTGGAGAAGAACTGTGGCGTGAGTTCCATCTTTGGCCCTGGAACTTCTGCATGCCTTG
GGCACAGCCAAAAAAAAAAATGGAAAATGGTTGAACGGCTTAGAGGAGAAATTTGTGACT
CTCCAGAGAGGAAGCACCTTGGAAACCACTCTCCCG
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Blue-coloured subsequences are predicted RNA structures by RNAz
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CTACTGGACCTGCCGCTGGCCTCTGAGCGGCTGTGGAGCGGCGTTGGGCGCGCCCTGGGA
CCCTCACAGCGCTCTCCGAAGGACACTTTCGGGCCCGGGTCCCGAGGCTCCGGCCGCAGA
CCCGAGGAGGAAAGGACCTATTCTCCGTTCTTTTTCAGCATCCCGGTCTTTCCCTCTTCT
CTGCCCAGCATGGCCCGAAACGACAGGAGAGCCTCTTCTGGATCGGCCTTTCCAACCGCG
GGCTGGAAGGATTCTGCATGAGGATGGATTCGCCGGTTTCTCGGGACCCACGCACAGCAG
GCATTTAGAGTTAGGCTGCTGCTCTTATTTAAAGAGGGCTGAGAACACCCGCAATCTGTT
AGGAAGAAGTTCAGTTAGAAGACTTTCTTCACATCTTGAGAAAGAAGGGATTGAACCCCT
TTCCTTTAGAGAACAGCCCTCTATTTCGTCTGGGGCTCGTTACAGCAAGCACAGCTGAGG
ACTGCCTCCAGGAATCTAGAAGAGCTTCCAGTGGAGCCCATGGAAGAATTGAAAGAAGTG
GAAAATTATGCAAACCGCGTCTGTAACTTACCAGAGGCAAAAGAAGCATTTTCTCATGGT
TGTGAAAAGGAAAGCAGACAGCCTAGACATGAGTTTAAAGAGTTCCAACTCAAACCAGGA
GAAATTTGAACAAATCTACCAGCCTCTGCAAAGGGAACATCAGAGACATCAAGAACCTGC
ACATCAGTCTAGAAAAAATTTGAGCGAGATGCACGATGAAGACCCAGGAAAAGATAAAAC
GTCGCAAAACTGCGTGGAGAGAGATTTGGAGCACGCCGCAAGGAGCCTGGGGACGGCCGG
TGAGGAGATCCGCAGGCTCCCCGCCCAGGAACCGCAAGGCCAGGGGGAAGAGCAGCGCGA
ATTAGATTCTGCATTTGAGAAGTCTCAACTAGAAGTTGAGAAATTAAAAGAACTTTTGAA
AGAGCTGAAAGAAAATGGCTCAGCTGACTTACAGAAAGCAAAGGAACATAACCGGAGACT
GGATGAGGAAATTCTGGCTTTAAGGAATCGGGTTCGATCACTTGACTCAGAAAAAAAAGT
ACTTGGAGAAGAACTGTGGCGTGAGTTCCATCTTTGGCCCTGGAACTTCTGCATGCCTTG
GGCACAGCCAAAAAAAAAAATGGAAAATGGTTGAACGGCTTAGAGGAGAAATTTGTGACT
CTCCAGAGAGGAAGCACCTTGGAAACCACTCTCCCG
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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
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47-360, gnl|bosTau2|chr11 (42533946-42534242) |
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47-360, gnl|Hg17|chr1 (42598109-42598422) |
| |
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538-659, gnl|bosTau2|chr11 (42547534-42547655) |
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538-659, gnl|canFam2|chr15 (3798588-3798435) |
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538-659, gnl|danRer3|chr23 (21514237-21514383) |
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538-659, gnl|dasNov1|scaffold_13504 (1042-894) |
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538-659, gnl|echTel1|scaffold_187809 (6656-6496) |
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538-659, gnl|hg17|chr1 (42610112-42610263) |
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538-659, gnl|Hg17|chr1 (42610126-42610250) |
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538-659, gnl|loxAfr1|scaffold_41804 (34008-33854) |
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538-659, gnl|monDom2|scaffold_43 (4197977-4197824) |
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538-659, gnl|panTro1|chr1 (43580163-43580314) |
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538-659, gnl|rheMac2|chr1 (45368570-45368721) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
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47-360, gnl|bosTau2|chr11 (42533946-42534242) |
|
47-360, gnl|Hg17|chr1 (42598109-42598422) |
| |
|
538-659, gnl|bosTau2|chr11 (42547534-42547655) |
|
538-659, gnl|canFam2|chr15 (3798588-3798435) |
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538-659, gnl|danRer3|chr23 (21514237-21514383) |
|
538-659, gnl|dasNov1|scaffold_13504 (1042-894) |
|
538-659, gnl|echTel1|scaffold_187809 (6656-6496) |
|
538-659, gnl|hg17|chr1 (42610112-42610263) |
|
538-659, gnl|Hg17|chr1 (42610126-42610250) |
|
538-659, gnl|loxAfr1|scaffold_41804 (34008-33854) |
|
538-659, gnl|monDom2|scaffold_43 (4197977-4197824) |
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538-659, gnl|panTro1|chr1 (43580163-43580314) |
|
538-659, gnl|rheMac2|chr1 (45368570-45368721) |
