Non-Coding RNA Search

Ss1.1-Pig4-TMW8038G18.5

Sequence:


               
               CGGCTCTCCTTCAGCTGCAGGATCTTTTCCAAAGCCTGGGGGATCTTGGGGCCCACAGAG
GGGTCGTCCATATCTGTTCTCATCTCCAGGGGGTGGTGGGGGACCACGAGGCCGAGGAAC
AGGGGCCCCCATAGGCAAAACAGTGGGAGTGGGGCCCACCGGGGCAGCTACTCGAGCACC
CAGAGGAGGGCGAACACCAATCTGGCCCAAGTCCTGTGGGGGCCGAGGGACTGGGGTGCC
CATCTTGGCAATCTCCTGCTGCCGCTGCTCCAGTAACACGGCTGCCCGCTTCTGCTGCTC
CAAAAGCTCATGTTCCTTCAGTGAATGATCCCCCTGCTGCTTGGCACGTTCCTCTTGCTG
CATCAGCAATGCCGCCTGCTGCTGCGCCAGCTTTAACCGCTCTTCCTCGGACAGTGCCAC
AGGTTCACCCACTCGGAGAGGAGGAGGGGGGCCCAAGTTTGGAGGGCGGGGTCCAACTGC
CATGGGAAAGCCAAGGCCAAGGCCAGGTGGAGGTGGTGGGGGTGGTGGAGGAGGCTGTAG
AGGGGGGAGTCCCATGGGCGGGGGTGGCATGGGAATCCCAGAGAGCTGGGCTGACATAGG
AGGGGGAGCAGCTTTGTCCCCATCTTCACCTCTCAGAACAGGCCGACTCAGGACGATGCC
AGTCTGGCGGGTGTAGGTCTGCAGCCTTTCCACCAGCTCCTCGCGACTCCCCTGGATTGG
AGCGCCGATCTCCGCTAATTTGGCCTGAAGCTCCTGAGCAGCCCAGGCACCATAATGCCC
AGGAGGCGGCGGCGGCGGCAGCTGCAACTCTCCTTTCGGAGGCTCGGG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CGGCTCTCCTTCAGCTGCAGGATCTTTTCCAAAGCCTGGGGGATCTTGGGGCCCACAGAG
GGGTCGTCCATATCTGTTCTCATCTCCAGGGGGTGGTGGGGGACCACGAGGCCGAGGAAC
AGGGGCCCCCATAGGCAAAACAGTGGGAGTGGGGCCCACCGGGGCAGCTACTCGAGCACC
CAGAGGAGGGCGAACACCAATCTGGCCCAAGTCCTGTGGGGGCCGAGGGACTGGGGTGCC
CATCTTGGCAATCTCCTGCTGCCGCTGCTCCAGTAACACGGCTGCCCGCTTCTGCTGCTC
CAAAAGCTCATGTTCCTTCAGTGAATGATCCCCCTGCTGCTTGGCACGTTCCTCTTGCTG
CATCAGCAATGCCGCCTGCTGCTGCGCCAGCTTTAACCGCTCTTCCTCGGACAGTGCCAC
AGGTTCACCCACTCGGAGAGGAGGAGGGGGGCCCAAGTTTGGAGGGCGGGGTCCAACTGC
CATGGGAAAGCCAAGGCCAAGGCCAGGTGGAGGTGGTGGGGGTGGTGGAGGAGGCTGTAG
AGGGGGGAGTCCCATGGGCGGGGGTGGCATGGGAATCCCAGAGAGCTGGGCTGACATAGG
AGGGGGAGCAGCTTTGTCCCCATCTTCACCTCTCAGAACAGGCCGACTCAGGACGATGCC
AGTCTGGCGGGTGTAGGTCTGCAGCCTTTCCACCAGCTCCTCGCGACTCCCCTGGATTGG
AGCGCCGATCTCCGCTAATTTGGCCTGAAGCTCCTGAGCAGCCCAGGCACCATAATGCCC
AGGAGGCGGCGGCGGCGGCAGCTGCAACTCTCCTTTCGGAGGCTCGGG

Coded protein: 1 entry(ies)

More info

Coded protein: 1 entry(ies)

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               Q9CS24_MOUSE

Coded protein: 1 entry(ies)

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Protein identifier


               
               Q9CS24_MOUSE

Aligned organism(s): 7 entry(ies)

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Aligned organism(s): 7 entry(ies)

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               171-286, gnl|bosTau2|chr29 (38882986-38882868)
               

               
               171-286, gnl|Hg17|chr11 (65581002-65580884)
               

               
               171-286, gnl|Mm7|chr19 (5186111-5186229)
               


               
               337-622, gnl|bosTau2|chr29 (38881397-38881112)
               


               
               710-828, gnl|bosTau2|chr29 (38879592-38879474)
               

               
               710-828, gnl|Hg17|chr11 (65576565-65576447)
               

               
               710-828, gnl|Mm7|chr19 (5190067-5190185)

Aligned organism(s): 7 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               171-286, gnl|bosTau2|chr29 (38882986-38882868)
               

               
               171-286, gnl|Hg17|chr11 (65581002-65580884)
               

               
               171-286, gnl|Mm7|chr19 (5186111-5186229)
               


               
               337-622, gnl|bosTau2|chr29 (38881397-38881112)
               


               
               710-828, gnl|bosTau2|chr29 (38879592-38879474)
               

               
               710-828, gnl|Hg17|chr11 (65576565-65576447)
               

               
               710-828, gnl|Mm7|chr19 (5190067-5190185)

	171-286, gnl\|bosTau2\|chr29 (38882986-38882868)
	171-286, gnl\|Hg17\|chr11 (65581002-65580884)
	171-286, gnl\|Mm7\|chr19 (5186111-5186229)

	337-622, gnl\|bosTau2\|chr29 (38881397-38881112)

	710-828, gnl\|bosTau2\|chr29 (38879592-38879474)
	710-828, gnl\|Hg17\|chr11 (65576565-65576447)
	710-828, gnl\|Mm7\|chr19 (5190067-5190185)