Ss1.1-Pig4-TMW8038J04.3
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GGCATGGACACCTCAAACAGATGTGGAGGCAGAAGGCGACCCAGCAAAGCTGCCTGTGGT
GCATCCAGCGGAAGCCCGCCCTCCTCCAGCTGGGGGCCATGAACCAGATGTGGAAAAGAA
CACGTCCTTAGCAGCCTCAGCAGGGGCAGACGTCAGAAAGAGCCAGCTTCTGGCAGAAGG
GGATGCTGGGACGGAGTGGGCTGTAGCCATTCTTGAACAGGACCGAGCTCTTGGGGCCGG
GGCCCAGAGTGTGTCAGCCAGGGCACAGGTGGGGCAGGACCTTCCCCTTGTCTCAAGAGA
GCACCTAGCAGATGTGGCGGTGGACACAGGCGCTCCAGGGGAAGCCACCCAGACACAGAG
AGAGGGAACCCAGGCCCTCACAGAGAGGGAGAGAGAACTAAACGTGGACAGGACCATAGA
CTCTGGAGACAACCGTGACGATTCTGAAGATCTGGACCTGCAAGCCACCCAGTGCTTTGT
GGAGGGAGAGAATCAGAGCCCGGAAGCAGACCCCAGCATGGAGGATGAGCCCACCCAGGC
CTTCCCATCTACTCTGCCCCAGGAGCCTGGCCCTTCCTGTTGCAGCTTCCAGGCCTCAGG
TACCCTGGATGAGCCATGGGAGCTCTTAGCTACACAGCCATTCTGTCCAAGAGAGTCTGA
GGCCTCTGAGATCCAGCCCGTTGACACCCACCTGGAGGCCCGTGGCCTTTGCCCCTCTCC
ACCTAGGGCAGCACTGCCAGAGCAACACCCAGAGAGCCCAGAGCCACTGGGGAGTCAGGG
TGGAGGGCGGCAGACTGTGGAGAAAGCCACGGGTACCCCAAGAGAAACAGCAGAGGGGCC
GACCCCTGAGAGAGGGCCCCTGGAGAGGGCAACCAAGGAGCCGCCATCAGAAGGAGAGAG
GGGAGGGATGGGAGAGGAGGGGTTACCCAGGGGGACACAGGACAGGGAAGAAAAACAGGT
GTTAGCTGGAGTTACTCAGAGACAAGAGTCTGACAGAACAGTGAAAAGTACAAGCATTGA
CGGGGGCCTGGAGAGTTTGCAGGTAGAAATTGAGACACCCAAGGAAATGCAAGAGAATGA
GATAGAAAAGCAGACTCTTGCAAGAGACATGTTGGAGAGGGAAGCAGAGAAACTTGTAGC
AGAGAGAGAGAGTGAGGCAGGTGGGCCAGAAGTAAAGGTGCCCGAAGCCGTACAGGACAG |
Blue-coloured subsequences are predicted RNA structures by RNAz
|
GGCATGGACACCTCAAACAGATGTGGAGGCAGAAGGCGACCCAGCAAAGCTGCCTGTGGT
GCATCCAGCGGAAGCCCGCCCTCCTCCAGCTGGGGGCCATGAACCAGATGTGGAAAAGAA
CACGTCCTTAGCAGCCTCAGCAGGGGCAGACGTCAGAAAGAGCCAGCTTCTGGCAGAAGG
GGATGCTGGGACGGAGTGGGCTGTAGCCATTCTTGAACAGGACCGAGCTCTTGGGGCCGG
GGCCCAGAGTGTGTCAGCCAGGGCACAGGTGGGGCAGGACCTTCCCCTTGTCTCAAGAGA
GCACCTAGCAGATGTGGCGGTGGACACAGGCGCTCCAGGGGAAGCCACCCAGACACAGAG
AGAGGGAACCCAGGCCCTCACAGAGAGGGAGAGAGAACTAAACGTGGACAGGACCATAGA
CTCTGGAGACAACCGTGACGATTCTGAAGATCTGGACCTGCAAGCCACCCAGTGCTTTGT
GGAGGGAGAGAATCAGAGCCCGGAAGCAGACCCCAGCATGGAGGATGAGCCCACCCAGGC
CTTCCCATCTACTCTGCCCCAGGAGCCTGGCCCTTCCTGTTGCAGCTTCCAGGCCTCAGG
TACCCTGGATGAGCCATGGGAGCTCTTAGCTACACAGCCATTCTGTCCAAGAGAGTCTGA
GGCCTCTGAGATCCAGCCCGTTGACACCCACCTGGAGGCCCGTGGCCTTTGCCCCTCTCC
ACCTAGGGCAGCACTGCCAGAGCAACACCCAGAGAGCCCAGAGCCACTGGGGAGTCAGGG
TGGAGGGCGGCAGACTGTGGAGAAAGCCACGGGTACCCCAAGAGAAACAGCAGAGGGGCC
GACCCCTGAGAGAGGGCCCCTGGAGAGGGCAACCAAGGAGCCGCCATCAGAAGGAGAGAG
GGGAGGGATGGGAGAGGAGGGGTTACCCAGGGGGACACAGGACAGGGAAGAAAAACAGGT
GTTAGCTGGAGTTACTCAGAGACAAGAGTCTGACAGAACAGTGAAAAGTACAAGCATTGA
CGGGGGCCTGGAGAGTTTGCAGGTAGAAATTGAGACACCCAAGGAAATGCAAGAGAATGA
GATAGAAAAGCAGACTCTTGCAAGAGACATGTTGGAGAGGGAAGCAGAGAAACTTGTAGC
AGAGAGAGAGAGTGAGGCAGGTGGGCCAGAAGTAAAGGTGCCCGAAGCCGTACAGGACAG |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
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5-434, gnl|bosTau2|chr23 (20811483-20811897) |
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5-434, gnl|canFam2|chr12 (3505784-3506275) |
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5-434, gnl|hg17|chr6 (30787629-30788114) |
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5-434, gnl|Hg17|chr6 (30788059-30787636) |
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5-434, gnl|mm7|chr17 (33951663-33951283) |
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5-434, gnl|monDom2|scaffold_42 (18620388-18619903) |
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5-434, gnl|oryCun1|scaffold_177399 (40480-39995) |
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5-434, gnl|panTro1|chr5 (31249039-31249524) |
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5-434, gnl|rheMac2|chr4 (30295320-30295805) |
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5-434, gnl|rn3|chr20 (3051935-3052309) |
| |
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597-1200, gnl|bosTau2|chr23 (20813489-20814104) |
|
597-1200, gnl|Hg17|chr6 (30784116-30783504) |
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597-1200, gnl|Mm7|chr17 (33953293-33953827) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
5-434, gnl|bosTau2|chr23 (20811483-20811897) |
|
5-434, gnl|canFam2|chr12 (3505784-3506275) |
|
5-434, gnl|hg17|chr6 (30787629-30788114) |
|
5-434, gnl|Hg17|chr6 (30788059-30787636) |
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5-434, gnl|mm7|chr17 (33951663-33951283) |
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5-434, gnl|monDom2|scaffold_42 (18620388-18619903) |
|
5-434, gnl|oryCun1|scaffold_177399 (40480-39995) |
|
5-434, gnl|panTro1|chr5 (31249039-31249524) |
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5-434, gnl|rheMac2|chr4 (30295320-30295805) |
|
5-434, gnl|rn3|chr20 (3051935-3052309) |
| |
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597-1200, gnl|bosTau2|chr23 (20813489-20814104) |
|
597-1200, gnl|Hg17|chr6 (30784116-30783504) |
|
597-1200, gnl|Mm7|chr17 (33953293-33953827) |
