Non-Coding RNA Search

Ss1.1-Pig4-TMW8038N16.5

Sequence:


               
               GTCTGGGGGGAGCCGAGATGCTGTGCCTCCTGTGTTGTGTGGAGAAGGTCCGGGGGGAGT
GGGTGTGTCTGGCGTCTGTGTGGGGGCGTGGCTTTGAGTAATTCTATGAACACTGGGTGG
ATTGCAGATCATGGGAGCTCGTGTGCAGGCAGGTGTGCGTGTGCCATGCCCTCGGGGTGG
AGTCCCAGGAAGGTGCAGCCCTGGGACATCTCAGGGGTCCCCGGGCTTTGCACTTGTACC
CTGATGTCTGAGCCTTCGGACAACCCTTGAAGCCAATTCCTCTTTCCAGGACTTTAGGCT
CAAGGTTTTCATAATCCAGGGAACTGTGAATTTTTCCTTAGACCATAAATGCAATAAAAA
AGCATAAGAAAAGCAGAAAAATTAGAGGAGCGCAGTGCACGGAGGTGTATTCTACAGGTT
CTGAGGCGTCCCCTGCGCCATCCTCTTAAAGTGAGGATAAAAAAACGTGCACACAGGGAT
GAGCTGGTTTTGTGTCTGCTTGCACTTGGGAACATGCTCTGTTTCCCCTCGTGTCAGTGG
GGAAGGGAAGCAACTTGCAGAGCACTCCTTTGTGCCAGACACTGGGCTACAGACCTCAGC
AGGCTTCGGCCTTGTTATAATGTGGTAATTGGAGAGCTGCGTGCCAGGCCACGTGTTGCA
TGCGCTCTCTCTCCTTTAATTCCCGAAACAAGCCCACAGGGAAGGAGCCGCCGGCACAGA
CAAGAACGCAGGCTCTGGAGTCGGATTGCTTGGGATTCGTCCTGGGCCCCACCACTTACT
AGCTGGGCAGTCCTAGGCCAGTGACTTAACTTCTCTGTGTTTCAGTGTCCTCAGTCATAA
AATGGAGATACTCTCCTGGGGTGGCGGTGACTTAATAATGCCACATGCTTGCAATAGTAC
AGAGCCCACAGAAAACATTCAGTAAATGTTATTACTGTTATTCATCAGGCTTTACTGATG
AGGAGACTGATGATCAGAGTGGCTGAGATGATGGCACATGTATTTGGGAGGGCCAGAATT
CTACCCGAAGCCTGACTCATCCTTCAGGTCATGCTAGGTTACTTGCCCAGGGTCACATCT
GGGGACCCTGTTCTTTCTGATCCCAAGGCCTCTCCCCTCCTCTTCACAAACTGGCAAAAA
TTCATTTCCTACATATCCTGCTCTTCTTTCTGTGATAATCTGTCCCATGACTTAGTTTGG
AACCTAGGCCAAATTACGGTAGTACATTTTTCTGACACACTAAAAAGAGGGATTTTGGAG
TTTGGTGGCATGGCGGGTTAAGGATTTGGGGTTGTCACATTAGTGGCTTGGGTTTGACCT
CTGACTCGGGAACTTTTCCATGCTTTGGGTGCAGCCAAACTCATAAAATAAAATAAAATG
TGATTTTGCATT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GTCTGGGGGGAGCCGAGATGCTGTGCCTCCTGTGTTGTGTGGAGAAGGTCCGGGGGGAGT
GGGTGTGTCTGGCGTCTGTGTGGGGGCGTGGCTTTGAGTAATTCTATGAACACTGGGTGG
ATTGCAGATCATGGGAGCTCGTGTGCAGGCAGGTGTGCGTGTGCCATGCCCTCGGGGTGG
AGTCCCAGGAAGGTGCAGCCCTGGGACATCTCAGGGGTCCCCGGGCTTTGCACTTGTACC
CTGATGTCTGAGCCTTCGGACAACCCTTGAAGCCAATTCCTCTTTCCAGGACTTTAGGCT
CAAGGTTTTCATAATCCAGGGAACTGTGAATTTTTCCTTAGACCATAAATGCAATAAAAA
AGCATAAGAAAAGCAGAAAAATTAGAGGAGCGCAGTGCACGGAGGTGTATTCTACAGGTT
CTGAGGCGTCCCCTGCGCCATCCTCTTAAAGTGAGGATAAAAAAACGTGCACACAGGGAT
GAGCTGGTTTTGTGTCTGCTTGCACTTGGGAACATGCTCTGTTTCCCCTCGTGTCAGTGG
GGAAGGGAAGCAACTTGCAGAGCACTCCTTTGTGCCAGACACTGGGCTACAGACCTCAGC
AGGCTTCGGCCTTGTTATAATGTGGTAATTGGAGAGCTGCGTGCCAGGCCACGTGTTGCA
TGCGCTCTCTCTCCTTTAATTCCCGAAACAAGCCCACAGGGAAGGAGCCGCCGGCACAGA
CAAGAACGCAGGCTCTGGAGTCGGATTGCTTGGGATTCGTCCTGGGCCCCACCACTTACT
AGCTGGGCAGTCCTAGGCCAGTGACTTAACTTCTCTGTGTTTCAGTGTCCTCAGTCATAA
AATGGAGATACTCTCCTGGGGTGGCGGTGACTTAATAATGCCACATGCTTGCAATAGTAC
AGAGCCCACAGAAAACATTCAGTAAATGTTATTACTGTTATTCATCAGGCTTTACTGATG
AGGAGACTGATGATCAGAGTGGCTGAGATGATGGCACATGTATTTGGGAGGGCCAGAATT
CTACCCGAAGCCTGACTCATCCTTCAGGTCATGCTAGGTTACTTGCCCAGGGTCACATCT
GGGGACCCTGTTCTTTCTGATCCCAAGGCCTCTCCCCTCCTCTTCACAAACTGGCAAAAA
TTCATTTCCTACATATCCTGCTCTTCTTTCTGTGATAATCTGTCCCATGACTTAGTTTGG
AACCTAGGCCAAATTACGGTAGTACATTTTTCTGACACACTAAAAAGAGGGATTTTGGAG
TTTGGTGGCATGGCGGGTTAAGGATTTGGGGTTGTCACATTAGTGGCTTGGGTTTGACCT
CTGACTCGGGAACTTTTCCATGCTTTGGGTGCAGCCAAACTCATAAAATAAAATAAAATG
TGATTTTGCATT

Aligned organism(s): 4 entry(ies)

More info

Aligned organism(s): 4 entry(ies)

Help | Less info


               
               267-596, gnl|bosTau2|chr25 (4181728-4181393)
               

               
               267-596, gnl|Mm7|chr16 (4150257-4149934)
               


               
               672-1141, gnl|bosTau2|chr25 (4181143-4180665)
               

               
               672-1141, gnl|Mm7|chr16 (4149865-4149400)

Aligned organism(s): 4 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               267-596, gnl|bosTau2|chr25 (4181728-4181393)
               

               
               267-596, gnl|Mm7|chr16 (4150257-4149934)
               


               
               672-1141, gnl|bosTau2|chr25 (4181143-4180665)
               

               
               672-1141, gnl|Mm7|chr16 (4149865-4149400)

	267-596, gnl\|bosTau2\|chr25 (4181728-4181393)
	267-596, gnl\|Mm7\|chr16 (4150257-4149934)

	672-1141, gnl\|bosTau2\|chr25 (4181143-4180665)
	672-1141, gnl\|Mm7\|chr16 (4149865-4149400)