Non-Coding RNA Search

Ss1.1-Pig4-TMW8039H20.3

Sequence:


               
               CGGGCATATATCTGGGGAAAACTC------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------TGAATCTAAAAAAAAAAAAGTACA
AATGAACTTATTTACAAAACAGAAACAGACTCACAGATATAGAAAACAAACATGATTATC
AAAGGGGATAGCAAGATGGGAAGAGATAAATTAGGAATTTGGGGTTAACACACAGAGAAT
ACTATATATAAAATAAACAACAAGGATCTACTGTATAGCAAAGGGAACTATTATATATTT
TGTATCTTGTAATAACCTACAATAATCTGAAAAAAAAAATAGAAATGAATCACTTTGCTG
GATACTTGAAATTAACACAACATTGTAAATTAACTGTACTTAATTAAAAAGTATATTACA
GAATTTATTAAGAAATATTACGATATTTCCCTTTAAAAAAAAAACACTATGGAATTCCCT
TATGGTGCAGTGGGTTGACGATCCAGTGTTGTCACTGTCATGGCTTGAGTTGCTGCTGTG
GCTCAGGTTCGATCTGGGAACTTTCACGGCCAAAGCAAAAAACTGTAATAATTTGTTAGT
GGACACACAATAAAAATGATGTAAATTTTGACATCAAGAACATAAAATGTGGGGTGGTGG
AATACAAAAATGTAGAGCTTTTCTATGCATTCTAAATTGTTAACAGCTTAAAATAGTGTT
ATAACTAGAAGATGCTTTAAAATTATTTTATGGCAATAGAATTGACATATATTAATTTCA
GATATAAAACAATGATTTGATATTTGTATATATTGCAAAATTATCACCACAATAAGTCTA
ATTAAATCCATCACCATACATAGTTATAATTTTTTAAGGTAAGCTACATGATAACCACGA
AGCAAAAACCTACAGTGGATACACACACACACACACACAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGGGGGGGGGGGGGTTTTATA
ATTTTTGGGGGGGGGGGGAAAATCCCCCCCCCCTTTTTTTTTTTAAGAAGGGGGGCCCTT
TGGGGGGGGTTTTAAAAAAGGGGG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CGGGCATATATCTGGGGAAAACTC------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------TGAATCTAAAAAAAAAAAAGTACA
AATGAACTTATTTACAAAACAGAAACAGACTCACAGATATAGAAAACAAACATGATTATC
AAAGGGGATAGCAAGATGGGAAGAGATAAATTAGGAATTTGGGGTTAACACACAGAGAAT
ACTATATATAAAATAAACAACAAGGATCTACTGTATAGCAAAGGGAACTATTATATATTT
TGTATCTTGTAATAACCTACAATAATCTGAAAAAAAAAATAGAAATGAATCACTTTGCTG
GATACTTGAAATTAACACAACATTGTAAATTAACTGTACTTAATTAAAAAGTATATTACA
GAATTTATTAAGAAATATTACGATATTTCCCTTTAAAAAAAAAACACTATGGAATTCCCT
TATGGTGCAGTGGGTTGACGATCCAGTGTTGTCACTGTCATGGCTTGAGTTGCTGCTGTG
GCTCAGGTTCGATCTGGGAACTTTCACGGCCAAAGCAAAAAACTGTAATAATTTGTTAGT
GGACACACAATAAAAATGATGTAAATTTTGACATCAAGAACATAAAATGTGGGGTGGTGG
AATACAAAAATGTAGAGCTTTTCTATGCATTCTAAATTGTTAACAGCTTAAAATAGTGTT
ATAACTAGAAGATGCTTTAAAATTATTTTATGGCAATAGAATTGACATATATTAATTTCA
GATATAAAACAATGATTTGATATTTGTATATATTGCAAAATTATCACCACAATAAGTCTA
ATTAAATCCATCACCATACATAGTTATAATTTTTTAAGGTAAGCTACATGATAACCACGA
AGCAAAAACCTACAGTGGATACACACACACACACACACAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGGGGGGGGGGGGGTTTTATA
ATTTTTGGGGGGGGGGGGAAAATCCCCCCCCCCTTTTTTTTTTTAAGAAGGGGGGCCCTT
TGGGGGGGGTTTTAAAAAAGGGGG

Aligned organism(s): 1 entry(ies)

More info

Aligned organism(s): 1 entry(ies)

Help | Less info


               
               5-338, gnl|bosTau2|chr1 (20667888-20667543)

Aligned organism(s): 1 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               5-338, gnl|bosTau2|chr1 (20667888-20667543)