Non-Coding RNA Search

Ss1.1-Pig4-TMW8039L19.5

Sequence:


               
               AGACACGCCCCACCCATCAGTGAGCAGGCATCAGTCCCTCTTCTAGGAAGTCAACACAAG
CCCTGGACCAACCACAGCCACCAGGGACACACACTTAGAGGCAAGAGGGACTACAATCCT
CCACCCTGCTGAATGTGCTTAGTGACCTCATACACAGAAAGAGAAAATGACACTACAGAG
AAGTATGTCCCAGACAAAGGAACAAAATAAAAACCTCAGAACAACTAAGTGAATTGGTGA
TAGGCAGTCTATGTGAAAAAGAATACAGAGTGGTGATAGTAAAACTGATACAAGATAACA
GAAAAAGAATGGAGGCAAAGATTGAGAAGATACAATAAATGTTTCAAAAAGAGCTAGAAG
ATTTAAAAAACAGATGAACAATGCAATAACTGAAATGAAAAATGTGCCAGAAGGAATCAC
TAGCAACACATGTGAGACAGAGGAACAAATAAGCAGAAAGACACATTGGTGGAAATCACC
ACCATGGAACAGAATAAAAAAAAAAATAATTAAATGAAGGTAGTCTAGCGACCTCTCAGA
CATTAAACCCAAGAATATTCACATTATATGGGTCCCAGAAGGTGAAGAGAGAGAAAGGTC
CTGTGAAGAGATAATAACCAGAAATTTCTCTAACATGTGAAAGGAAATGTTCACTCAAGT
CCAGGAAGCACAGAGTCCTATAGAGCTTAATCCCAAGGGGGAACTGAGACATATTAATCA
AATTGACCCAAATTAAAGACAAAGAGAAAAACATTAAAACAGCAAGGGAAAAGCAGCAAA
TAACATACCAGGGATTACCCATAAGTTAATCAGCTGATTTTTCAGCAGAAACTCTGCAGG
TCAGAAGGGAGTGACATGATATTTTTAAATTGATGA------------------------
------------------------------------------------------------
------------------------------------------------------------
TTTTTAGCACACAACTAGAAACAAAAAAAAAAAATACAAATGGGGAAGCTCACTGGTAAA
GGCAAAAACGTACAGTAAAGGTGGGAAATCATCCACATACAAATTTGATATCAAAACCAG
CAGTCCTGAGAAGAGGACGGTACAGATGCAGGATATTGGAAATGCATTTGAAGTTGAAAC
CAGCATCTTTTTTTTTTTTTTTTT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AGACACGCCCCACCCATCAGTGAGCAGGCATCAGTCCCTCTTCTAGGAAGTCAACACAAG
CCCTGGACCAACCACAGCCACCAGGGACACACACTTAGAGGCAAGAGGGACTACAATCCT
CCACCCTGCTGAATGTGCTTAGTGACCTCATACACAGAAAGAGAAAATGACACTACAGAG
AAGTATGTCCCAGACAAAGGAACAAAATAAAAACCTCAGAACAACTAAGTGAATTGGTGA
TAGGCAGTCTATGTGAAAAAGAATACAGAGTGGTGATAGTAAAACTGATACAAGATAACA
GAAAAAGAATGGAGGCAAAGATTGAGAAGATACAATAAATGTTTCAAAAAGAGCTAGAAG
ATTTAAAAAACAGATGAACAATGCAATAACTGAAATGAAAAATGTGCCAGAAGGAATCAC
TAGCAACACATGTGAGACAGAGGAACAAATAAGCAGAAAGACACATTGGTGGAAATCACC
ACCATGGAACAGAATAAAAAAAAAAATAATTAAATGAAGGTAGTCTAGCGACCTCTCAGA
CATTAAACCCAAGAATATTCACATTATATGGGTCCCAGAAGGTGAAGAGAGAGAAAGGTC
CTGTGAAGAGATAATAACCAGAAATTTCTCTAACATGTGAAAGGAAATGTTCACTCAAGT
CCAGGAAGCACAGAGTCCTATAGAGCTTAATCCCAAGGGGGAACTGAGACATATTAATCA
AATTGACCCAAATTAAAGACAAAGAGAAAAACATTAAAACAGCAAGGGAAAAGCAGCAAA
TAACATACCAGGGATTACCCATAAGTTAATCAGCTGATTTTTCAGCAGAAACTCTGCAGG
TCAGAAGGGAGTGACATGATATTTTTAAATTGATGA------------------------
------------------------------------------------------------
------------------------------------------------------------
TTTTTAGCACACAACTAGAAACAAAAAAAAAAAATACAAATGGGGAAGCTCACTGGTAAA
GGCAAAAACGTACAGTAAAGGTGGGAAATCATCCACATACAAATTTGATATCAAAACCAG
CAGTCCTGAGAAGAGGACGGTACAGATGCAGGATATTGGAAATGCATTTGAAGTTGAAAC
CAGCATCTTTTTTTTTTTTTTTTT

Aligned organism(s): 1 entry(ies)

More info

Aligned organism(s): 1 entry(ies)

Help | Less info


               
               1-403, gnl|bosTau2|chr10 (61296562-61296974)

Aligned organism(s): 1 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-403, gnl|bosTau2|chr10 (61296562-61296974)