Ss1.1-Pig4-TMW8039M15.3
               |  | CTCAGCACTGCATTTCCTACAAGATCTAAAAGCCACTTAGCCTCCACTCCTCCACGCCAC
CTGCTTTCAGGTGAAGATACACGAGCAGTCACTGGGACTTTCTCTGGGACCCTGTCAGTC
CTGACAGGTGAAATGGTTGTGGATTTATGAGCCCAAAGATCGGCGTATCCCGTCCGTTTT
CTTATTTTCCCAATTTCTGAAAGATAACTGTCGCCATTAAATTGAGAATCTGTCTTAAGA
TTAGCAATTCTGAGAACTGACTGGATGAGTGTAATTCTGTGATTTGTGAGACATGCATTG
AAACAGCCAGCAGAACATTCTGATTATCTGCTAACATTCGAAGAAAATAGAATTATCACT
GCAGTTAAAACCTTCTAACATAATCTACTATTTTCGAAATCAAAGTATTAGATGTGCTGC
TTAAAGGATGGTGCTACTTCAGAAGAAAAGGAGTTGGCAAGACATCTCTTCACAGATGTT
CCCAGAGGCCACTTTGGTGATTCAAAATCCCCTACCCCACTTACTCCTTTCCCACCCCCA
CCCGCCACTGAAAAGAAAACAATAGGGCCAGCTTACCAAAGTCAGTGAAAATACAGCTAG
TTCTCACCCCCA | 
Blue-coloured subsequences are predicted RNA structures by RNAz
               |  | CTCAGCACTGCATTTCCTACAAGATCTAAAAGCCACTTAGCCTCCACTCCTCCACGCCAC
CTGCTTTCAGGTGAAGATACACGAGCAGTCACTGGGACTTTCTCTGGGACCCTGTCAGTC
CTGACAGGTGAAATGGTTGTGGATTTATGAGCCCAAAGATCGGCGTATCCCGTCCGTTTT
CTTATTTTCCCAATTTCTGAAAGATAACTGTCGCCATTAAATTGAGAATCTGTCTTAAGA
TTAGCAATTCTGAGAACTGACTGGATGAGTGTAATTCTGTGATTTGTGAGACATGCATTG
AAACAGCCAGCAGAACATTCTGATTATCTGCTAACATTCGAAGAAAATAGAATTATCACT
GCAGTTAAAACCTTCTAACATAATCTACTATTTTCGAAATCAAAGTATTAGATGTGCTGC
TTAAAGGATGGTGCTACTTCAGAAGAAAAGGAGTTGGCAAGACATCTCTTCACAGATGTT
CCCAGAGGCCACTTTGGTGATTCAAAATCCCCTACCCCACTTACTCCTTTCCCACCCCCA
CCCGCCACTGAAAAGAAAACAATAGGGCCAGCTTACCAAAGTCAGTGAAAATACAGCTAG
TTCTCACCCCCA | 
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map