Ss1.1-Pig4-TMW8041A16.3
               |  | GTGACCTCGGGGCTGGCAGAGACCAGGCCCATCATCATCTCTGCCCGCAGCGCTGATTAC
AGGGATTAGGCCCTCGGCCACCCCCACCCTCGCCTGTCCTCCCGGCTCTCACTGCCGCCA
GCATAATAAGCCCCCTTCCCCCAAACCCAAACAATTGTCTGGCTTTAGTGTCTGCTCAGT
CTGGCGGGTCAGAGCCGGGTGAGGGACGGGAGGGAGGCCTCTTCTGCCGTTAGTTGGGCT
GTGTGGCCTCAGGTCAGTGTTTAACCTCTCTGAACCTCGAACCTCGATTCAGCCACACAG
TGCGGGATGCTGGGCCCGGTGACCTGGGGGCCCCCCAAGGGCAGGGACAGCAGGAGGGAG
GCCAAGGGAAGAAGCCGGAGGGCTACAGCTTAGATCTGAATAGGACTTTTCTCCCGTGTT
GAAAAGGGAGACAGGGAAGGCAGGAGGGGGGAGGGGGATAGACTGAAGCTGTCGGGAGTG
AAACAAGAGTGAGGGGAGGAGTTCTGGCTGTGGCACTATGGGATCAGCGCTATGGGATCT
TGGGAGCCCTGAGACGCGAAGGTTTGAACCCCAGCCCGGCACAATGGGTTAAGGATCCAG | 
Blue-coloured subsequences are predicted RNA structures by RNAz
               |  | GTGACCTCGGGGCTGGCAGAGACCAGGCCCATCATCATCTCTGCCCGCAGCGCTGATTAC
AGGGATTAGGCCCTCGGCCACCCCCACCCTCGCCTGTCCTCCCGGCTCTCACTGCCGCCA
GCATAATAAGCCCCCTTCCCCCAAACCCAAACAATTGTCTGGCTTTAGTGTCTGCTCAGT
CTGGCGGGTCAGAGCCGGGTGAGGGACGGGAGGGAGGCCTCTTCTGCCGTTAGTTGGGCT
GTGTGGCCTCAGGTCAGTGTTTAACCTCTCTGAACCTCGAACCTCGATTCAGCCACACAG
TGCGGGATGCTGGGCCCGGTGACCTGGGGGCCCCCCAAGGGCAGGGACAGCAGGAGGGAG
GCCAAGGGAAGAAGCCGGAGGGCTACAGCTTAGATCTGAATAGGACTTTTCTCCCGTGTT
GAAAAGGGAGACAGGGAAGGCAGGAGGGGGGAGGGGGATAGACTGAAGCTGTCGGGAGTG
AAACAAGAGTGAGGGGAGGAGTTCTGGCTGTGGCACTATGGGATCAGCGCTATGGGATCT
TGGGAGCCCTGAGACGCGAAGGTTTGAACCCCAGCCCGGCACAATGGGTTAAGGATCCAG | 
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map