Ss1.1-Pig4-TMW8041F19.3
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ATGTGTTCAGAGGCCTCCTCAAAGTGTGGTTTTGGAGAAGCGGTGATTGGCACGGGCTTG
TTTGTCTGCCTACATTGGGAACAAACACAGATCCGTTGATTTCACTGTTGAAAGCTTTGG
CTGGAGTCAAGGATATCCTTTGGGGAAAAAATGGGGAGGCATTCTTTAGCGGACAGTGTT
TGCTAATATTAAAATGCTTGATAAGAAAATCACCAGCCAAGAGTGAAAATAAAAGTGTGA
AATTGGAGAAATATGCCATCCGCAGGCGTGGGTTGAGTTGTCTCGTCTCATTCCAGCAGT
TGGCATATTTCACAGCTGTGCCTTCAGGAGATTCTCTTGTTTCGGGATACCGGCCTCCGG
AGTCTCCCCTTAGCAGGACAGACTATTAAATAATAATGCTGCTAAATGTTACTGAACCAC
TTGCTGACTGTGTGTGCCTATTTATTAATGAAACACACCGTTTCCCCCTGAGGGGCTCCC
ACGGCTGACACCTAGTCCCTGTCCTTCTGCGTTCACCGTCCAGGAGGGACAAGCGGCCTA
ACCTCAACAGGAAGCTGACCTTGGAGAGGCCGTGGTTCAGGTTCAGGCTGCCGGCAGGGG
CTGGAGAACAAGCTTAAACTTGAATCGACTCACCCCGTGCCGTTCCTCCAAGAACCTGAC
AGGCACCTGCTCAATAGGCCCCAACTGAGCCCCGGCTGAGAAGCTTCAGGAATCCTGTAG
GCCACCCACTCCAAAGGCTTAGGCAAAAGACTGGCTCTAAAAAGGCCGTTGTTGCTATGA
AACAATTAGTTATGGTTTGAAACCGGGGAGCAGGTGGTGTTTTATACCGACCACACTTTG
CTGGCTTCCTGCCAGAGTCCTCGATGCGTTATCGTCACCTGCCGGTTTTTCTGATGGGAC
CTCAGCACCTCTGCTGGTCCTCCTGGTCCGCCTTGGTCATAAACCGTTGGTAGAACAATA
CTTACTTTGGCAAACAAAGTAGAATAAACATGGACTCCCAGAAAGCAGACACATTCCACG
AAGAGCTCGCATTGCTTCCAAATTATTCATTAGCCCATTAGAACTTGAGTATTATGAATT
ATGAAAGAGTGCTGTTTCTAGTAAAAATAAGATCAACCATATCTTTGGGGGTTTTCTAAT
TGAGTTCCATTATTTTCAGGACGTAAACAATGTAATTATATATTGAGTACAAAATAAAGG
AACTGGAACAATTTGTTCAGCCTTAGAGAGCCAGTGTGGCCTTCAGTGGAAAAGACGGTT
GTCCTTGCTGTAAATCAGATAGATATGTGGTATCGAGGTGCTCTCATCAAGGGCTTCTAA
GGAGCGTTTTTCAGGGCTGGGTGAAGCCAGAGTGGA
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Blue-coloured subsequences are predicted RNA structures by RNAz
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ATGTGTTCAGAGGCCTCCTCAAAGTGTGGTTTTGGAGAAGCGGTGATTGGCACGGGCTTG
TTTGTCTGCCTACATTGGGAACAAACACAGATCCGTTGATTTCACTGTTGAAAGCTTTGG
CTGGAGTCAAGGATATCCTTTGGGGAAAAAATGGGGAGGCATTCTTTAGCGGACAGTGTT
TGCTAATATTAAAATGCTTGATAAGAAAATCACCAGCCAAGAGTGAAAATAAAAGTGTGA
AATTGGAGAAATATGCCATCCGCAGGCGTGGGTTGAGTTGTCTCGTCTCATTCCAGCAGT
TGGCATATTTCACAGCTGTGCCTTCAGGAGATTCTCTTGTTTCGGGATACCGGCCTCCGG
AGTCTCCCCTTAGCAGGACAGACTATTAAATAATAATGCTGCTAAATGTTACTGAACCAC
TTGCTGACTGTGTGTGCCTATTTATTAATGAAACACACCGTTTCCCCCTGAGGGGCTCCC
ACGGCTGACACCTAGTCCCTGTCCTTCTGCGTTCACCGTCCAGGAGGGACAAGCGGCCTA
ACCTCAACAGGAAGCTGACCTTGGAGAGGCCGTGGTTCAGGTTCAGGCTGCCGGCAGGGG
CTGGAGAACAAGCTTAAACTTGAATCGACTCACCCCGTGCCGTTCCTCCAAGAACCTGAC
AGGCACCTGCTCAATAGGCCCCAACTGAGCCCCGGCTGAGAAGCTTCAGGAATCCTGTAG
GCCACCCACTCCAAAGGCTTAGGCAAAAGACTGGCTCTAAAAAGGCCGTTGTTGCTATGA
AACAATTAGTTATGGTTTGAAACCGGGGAGCAGGTGGTGTTTTATACCGACCACACTTTG
CTGGCTTCCTGCCAGAGTCCTCGATGCGTTATCGTCACCTGCCGGTTTTTCTGATGGGAC
CTCAGCACCTCTGCTGGTCCTCCTGGTCCGCCTTGGTCATAAACCGTTGGTAGAACAATA
CTTACTTTGGCAAACAAAGTAGAATAAACATGGACTCCCAGAAAGCAGACACATTCCACG
AAGAGCTCGCATTGCTTCCAAATTATTCATTAGCCCATTAGAACTTGAGTATTATGAATT
ATGAAAGAGTGCTGTTTCTAGTAAAAATAAGATCAACCATATCTTTGGGGGTTTTCTAAT
TGAGTTCCATTATTTTCAGGACGTAAACAATGTAATTATATATTGAGTACAAAATAAAGG
AACTGGAACAATTTGTTCAGCCTTAGAGAGCCAGTGTGGCCTTCAGTGGAAAAGACGGTT
GTCCTTGCTGTAAATCAGATAGATATGTGGTATCGAGGTGCTCTCATCAAGGGCTTCTAA
GGAGCGTTTTTCAGGGCTGGGTGAAGCCAGAGTGGA
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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
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4-242, gnl|bosTau2|chr5 (69162798-69162554) |
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4-242, gnl|Hg17|chr22 (41537639-41537397) |
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422-667, gnl|bosTau2|chr5 (69162371-69162130) |
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422-667, gnl|canFam2|chr10 (25753362-25753020) |
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422-667, gnl|dasNov1|scaffold_60203 (4551-4916) |
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422-667, gnl|hg17|chr22 (41536806-41537145) |
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422-667, gnl|Hg17|chr22 (41537221-41536993) |
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422-667, gnl|loxAfr1|scaffold_8258 (64286-63987) |
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422-667, gnl|mm7|chr15 (83395146-83395408) |
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422-667, gnl|panTro1|chr23 (41792199-41792538) |
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422-667, gnl|rheMac2|chr10 (86795843-86796181) |
| |
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699-1263, gnl|bosTau2|chr5 (69160490-69159935) |
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699-1263, gnl|Hg17|chr22 (41535107-41534529) |
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699-1263, gnl|Mm7|chr15 (83394064-83393549) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
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4-242, gnl|bosTau2|chr5 (69162798-69162554) |
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4-242, gnl|Hg17|chr22 (41537639-41537397) |
| |
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422-667, gnl|bosTau2|chr5 (69162371-69162130) |
|
422-667, gnl|canFam2|chr10 (25753362-25753020) |
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422-667, gnl|dasNov1|scaffold_60203 (4551-4916) |
|
422-667, gnl|hg17|chr22 (41536806-41537145) |
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422-667, gnl|Hg17|chr22 (41537221-41536993) |
|
422-667, gnl|loxAfr1|scaffold_8258 (64286-63987) |
|
422-667, gnl|mm7|chr15 (83395146-83395408) |
|
422-667, gnl|panTro1|chr23 (41792199-41792538) |
|
422-667, gnl|rheMac2|chr10 (86795843-86796181) |
| |
|
699-1263, gnl|bosTau2|chr5 (69160490-69159935) |
|
699-1263, gnl|Hg17|chr22 (41535107-41534529) |
|
699-1263, gnl|Mm7|chr15 (83394064-83393549) |
