Ss1.1-Pig4-TMW8041F22.3
|
GTTAATTCAGAACTTTTCGAGTCTTTGTTGTTGCAACTGAGAACCCCGGGCGTGGAGGGA
GCCAGAGGGTCAGGCTCTGAGTCGACTACATTGTGGAGCATGACTATGATTCTGTATATG
GTGATAAGTTAACTGTTCCAGTTGGGGGAAATCATCCGGGATGTGCGAAAACTACAGGAG
GAAGGATGGCTGGAAGGGAACTGAATGGGAGCAGAGGAATGTTTCCTGACAATTTTGCTA
AGGAAATTGAGGGAGACAGAATTCAAGGGTGAAAATTTGCCTATCAAATGGGAAAAGCAA
GGGAATGTTTCAAGTCTTATACAATGAATCAGCACCTGTGGACTTCTAGCTGGAGGAATT
CAGCCACATGCACAAACGAAAAACATTAAGAAGAAAACCAAGAAACCTCAGTGTAAGGTT
GACTTTGACTACATTCCACAAAATGAGGCTGAAGTGGAGCTGAAATTGGGAAACATTATC
GATATTAGTGAAGAAGCAGAGGAAGGCTGGTGGGGTGGAACCCTGAACCCTGAACAACAA
GTCGGCACTGTTTCCCTCAAACTTTTGGAAGGAATTAGAGGTAACAGATGATGGCAGAAC
TCATGAAGCCCCGGAGGATTCAGAAACAGTTTTGACTGGGTCGACCTCTCCGGGAATGGG
AATGAAGCCACATCTGGATCACTTCCTACCCAACCAAAGAAAATCCAAGGAATTGGATTT
GGAGATATTTTTAAAGAAGGCTCTGTGAAACTTAGGACAAGAACATCCAGTAGTGAAACA
GAGGAGAAAAAAAACAGAAAAGCCCCTAATCACACCCTGGGAACCTCCATGTGCCACGGG
TGTGGCTCTAAA
|
Blue-coloured subsequences are predicted RNA structures by RNAz
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GTTAATTCAGAACTTTTCGAGTCTTTGTTGTTGCAACTGAGAACCCCGGGCGTGGAGGGA
GCCAGAGGGTCAGGCTCTGAGTCGACTACATTGTGGAGCATGACTATGATTCTGTATATG
GTGATAAGTTAACTGTTCCAGTTGGGGGAAATCATCCGGGATGTGCGAAAACTACAGGAG
GAAGGATGGCTGGAAGGGAACTGAATGGGAGCAGAGGAATGTTTCCTGACAATTTTGCTA
AGGAAATTGAGGGAGACAGAATTCAAGGGTGAAAATTTGCCTATCAAATGGGAAAAGCAA
GGGAATGTTTCAAGTCTTATACAATGAATCAGCACCTGTGGACTTCTAGCTGGAGGAATT
CAGCCACATGCACAAACGAAAAACATTAAGAAGAAAACCAAGAAACCTCAGTGTAAGGTT
GACTTTGACTACATTCCACAAAATGAGGCTGAAGTGGAGCTGAAATTGGGAAACATTATC
GATATTAGTGAAGAAGCAGAGGAAGGCTGGTGGGGTGGAACCCTGAACCCTGAACAACAA
GTCGGCACTGTTTCCCTCAAACTTTTGGAAGGAATTAGAGGTAACAGATGATGGCAGAAC
TCATGAAGCCCCGGAGGATTCAGAAACAGTTTTGACTGGGTCGACCTCTCCGGGAATGGG
AATGAAGCCACATCTGGATCACTTCCTACCCAACCAAAGAAAATCCAAGGAATTGGATTT
GGAGATATTTTTAAAGAAGGCTCTGTGAAACTTAGGACAAGAACATCCAGTAGTGAAACA
GAGGAGAAAAAAAACAGAAAAGCCCCTAATCACACCCTGGGAACCTCCATGTGCCACGGG
TGTGGCTCTAAA
|
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gi|61811705|ref|XP_614969.1| |
Protein identifier
|
gi|61811705|ref|XP_614969.1| |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
80-243, gnl|bosTau2|chr23 (40548847-40549010) |
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80-243, gnl|Hg17|chr6 (47578973-47579136) |
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80-243, gnl|Mm7|chr17 (40971355-40971192) |
| |
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397-504, gnl|bosTau2|chr23 (40569025-40569131) |
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397-504, gnl|canFam2|chr12 (18607741-18607893) |
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397-504, gnl|danRer3|chr20 (25341993-25342130) |
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397-504, gnl|dasNov1|scaffold_28315 (8538-8395) |
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397-504, gnl|echTel1|scaffold_308931 (95770-95622) |
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397-504, gnl|fr1|chrUn (199002879-199002750) |
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397-504, gnl|hg17|chr6 (47620267-47620419) |
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397-504, gnl|Hg17|chr6 (47620303-47620409) |
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397-504, gnl|mm7|chr17 (40957655-40957516) |
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397-504, gnl|Mm7|chr17 (40957625-40957519) |
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397-504, gnl|monDom2|scaffold_0 (191912402-191912252) |
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397-504, gnl|oryCun1|scaffold_187494 (9287-9141) |
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397-504, gnl|panTro1|chr5 (48413104-48413251) |
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397-504, gnl|rheMac2|chr4 (47355215-47355366) |
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397-504, gnl|rn3|chr9 (13839148-13839292) |
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397-504, gnl|tetNig1|chr14 (768842-768702) |
| |
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646-802, gnl|bosTau2|chr23 (40573469-40573622) |
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646-802, gnl|Hg17|chr6 (47649795-47649946) |
|
646-802, gnl|Mm7|chr17 (40948894-40948743) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
80-243, gnl|bosTau2|chr23 (40548847-40549010) |
|
80-243, gnl|Hg17|chr6 (47578973-47579136) |
|
80-243, gnl|Mm7|chr17 (40971355-40971192) |
| |
|
397-504, gnl|bosTau2|chr23 (40569025-40569131) |
|
397-504, gnl|canFam2|chr12 (18607741-18607893) |
|
397-504, gnl|danRer3|chr20 (25341993-25342130) |
|
397-504, gnl|dasNov1|scaffold_28315 (8538-8395) |
|
397-504, gnl|echTel1|scaffold_308931 (95770-95622) |
|
397-504, gnl|fr1|chrUn (199002879-199002750) |
|
397-504, gnl|hg17|chr6 (47620267-47620419) |
|
397-504, gnl|Hg17|chr6 (47620303-47620409) |
|
397-504, gnl|mm7|chr17 (40957655-40957516) |
|
397-504, gnl|Mm7|chr17 (40957625-40957519) |
|
397-504, gnl|monDom2|scaffold_0 (191912402-191912252) |
|
397-504, gnl|oryCun1|scaffold_187494 (9287-9141) |
|
397-504, gnl|panTro1|chr5 (48413104-48413251) |
|
397-504, gnl|rheMac2|chr4 (47355215-47355366) |
|
397-504, gnl|rn3|chr9 (13839148-13839292) |
|
397-504, gnl|tetNig1|chr14 (768842-768702) |
| |
|
646-802, gnl|bosTau2|chr23 (40573469-40573622) |
|
646-802, gnl|Hg17|chr6 (47649795-47649946) |
|
646-802, gnl|Mm7|chr17 (40948894-40948743) |
