Non-Coding RNA Search

Ss1.1-Pig4-TMW8041L02.3

Sequence:


               
               ATTTACATATTATTTAATTTTTCTGGCCCCATCTAAGCTGAGTGCCCCCAAAATCACAAA
TCTACCATGGCTTTCGAAGAGGGAATGGAGTCAGATTTCTGATTGTGCAACTAACAGAAT
TTCTAATTTGTACAGTTAGAAATTCACATTTCTAATTGTGCAAACTATCATGGTCACTTT
GAAGGGCCTAAAATTTAAAAGATGGTATTCTAGCTATGTCAAAGTCGAGTCAAACACTCA
GTTTTACCTAAGTTCATGTCATCATCTTAAAATTATTGTTCTTCAGAGTAGGGGGAGTAT
ATATTGTTACAGACAGCAAGACCACTCTAAACAACGTATGTCAGGAATCTTAAACTCATA
AAGTCTCAGTAGGCTTTTAGAACATCCTCTACAACACCTTCATTTAGGAAAACTCCTTAT
GGAGGGAAGCCTGTGTGTAATTTGCCTAGACAGGAAGGAACTGAAAGTAATAGTAATTAA
TATGTCTTGAGTGATTACCAAATGCCTAGCATTGGAATTAGTGCTTAATATGCTTTATCT
TAAGCCTCACCACTCTGTTTGACATAGGTCTTATTATTAAATCTCTCTCTTACATGTGAG
GAAACACATTCTCAAAGAAGTTAAGTACATTGTCCTTTGTCAAGTTGATAGTTTGAGGTA
GAGCCAGATCTGTCTGTCTCTATAACCTGAGCTCTTATCCAGGAGTTTATTCTAATTTAC
AAATATTCAATACAACTTATTGAAGTTTTTCTTTACCTAGTGGCAAATAAGGAAAGGTCT
TATTATTAGTAGCATTCTCATTTCAGCTTTGTAAAAAATTATGCTCCTTTAAAATATATA
GGATTTTTCTTTTACAGCATCAGTTTAGTTTTGTGAATAATTTACCATTGTTTTGATTAT
GTTCTTAAAGTATTAGTTATTACTTTGTAGAAAAGAAACCTTAATCTACTAAGTAAAGGG
TAAGTTACTTGAAGGTAATATCATTAGATCCACATTTTATCTGAGATAGAGACAGAGCAC
AGAGAAAGATAGGAGACATGGGTGAGGAAAACAATGCAAAACTGACCTCTTTACTTATTG
TTCTCCCTTAAAATCTTCATTGTTTTTCATCTCAGAAACTGTACTGTTACTAAAAACTAA
AATAGTAATGAATCTGGAGACCAGTTTATCTTCATGGCATAAATTTTCTGTTAAATTTAT
GTCCCTTTCAAGTAGGTACTTCTTTTCCTAATTGTAGAAAACTAAGTACATTAACCTGTT
ATCAAGGTTTGATATGATTAAACTTATCTCAGACTCAGCATATTAAAGATATCAATTCTC
CATAAATTGATGTGTACGCTTAACTCAGTTCCTGAAATCTCAGCAAGATTAAAAATCTGT
ATGGAAAGCCAAAGAAATTAGAACAGCTAAAACGAT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ATTTACATATTATTTAATTTTTCTGGCCCCATCTAAGCTGAGTGCCCCCAAAATCACAAA
TCTACCATGGCTTTCGAAGAGGGAATGGAGTCAGATTTCTGATTGTGCAACTAACAGAAT
TTCTAATTTGTACAGTTAGAAATTCACATTTCTAATTGTGCAAACTATCATGGTCACTTT
GAAGGGCCTAAAATTTAAAAGATGGTATTCTAGCTATGTCAAAGTCGAGTCAAACACTCA
GTTTTACCTAAGTTCATGTCATCATCTTAAAATTATTGTTCTTCAGAGTAGGGGGAGTAT
ATATTGTTACAGACAGCAAGACCACTCTAAACAACGTATGTCAGGAATCTTAAACTCATA
AAGTCTCAGTAGGCTTTTAGAACATCCTCTACAACACCTTCATTTAGGAAAACTCCTTAT
GGAGGGAAGCCTGTGTGTAATTTGCCTAGACAGGAAGGAACTGAAAGTAATAGTAATTAA
TATGTCTTGAGTGATTACCAAATGCCTAGCATTGGAATTAGTGCTTAATATGCTTTATCT
TAAGCCTCACCACTCTGTTTGACATAGGTCTTATTATTAAATCTCTCTCTTACATGTGAG
GAAACACATTCTCAAAGAAGTTAAGTACATTGTCCTTTGTCAAGTTGATAGTTTGAGGTA
GAGCCAGATCTGTCTGTCTCTATAACCTGAGCTCTTATCCAGGAGTTTATTCTAATTTAC
AAATATTCAATACAACTTATTGAAGTTTTTCTTTACCTAGTGGCAAATAAGGAAAGGTCT
TATTATTAGTAGCATTCTCATTTCAGCTTTGTAAAAAATTATGCTCCTTTAAAATATATA
GGATTTTTCTTTTACAGCATCAGTTTAGTTTTGTGAATAATTTACCATTGTTTTGATTAT
GTTCTTAAAGTATTAGTTATTACTTTGTAGAAAAGAAACCTTAATCTACTAAGTAAAGGG
TAAGTTACTTGAAGGTAATATCATTAGATCCACATTTTATCTGAGATAGAGACAGAGCAC
AGAGAAAGATAGGAGACATGGGTGAGGAAAACAATGCAAAACTGACCTCTTTACTTATTG
TTCTCCCTTAAAATCTTCATTGTTTTTCATCTCAGAAACTGTACTGTTACTAAAAACTAA
AATAGTAATGAATCTGGAGACCAGTTTATCTTCATGGCATAAATTTTCTGTTAAATTTAT
GTCCCTTTCAAGTAGGTACTTCTTTTCCTAATTGTAGAAAACTAAGTACATTAACCTGTT
ATCAAGGTTTGATATGATTAAACTTATCTCAGACTCAGCATATTAAAGATATCAATTCTC
CATAAATTGATGTGTACGCTTAACTCAGTTCCTGAAATCTCAGCAAGATTAAAAATCTGT
ATGGAAAGCCAAAGAAATTAGAACAGCTAAAACGAT

Aligned organism(s): 6 entry(ies)

More info

Aligned organism(s): 6 entry(ies)

Help | Less info


               
               3-375, gnl|bosTau2|chr3 (58009509-58009863)
               

               
               3-375, gnl|Hg17|chr15 (75328983-75328600)
               

               
               3-375, gnl|Mm7|chr9 (56343670-56343322)
               


               
               398-944, gnl|bosTau2|chr3 (58009862-58010419)
               

               
               398-944, gnl|Mm7|chr9 (56343323-56341342)
               


               
               947-1108, gnl|bosTau2|chr3 (58010393-58010549)

Aligned organism(s): 6 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               3-375, gnl|bosTau2|chr3 (58009509-58009863)
               

               
               3-375, gnl|Hg17|chr15 (75328983-75328600)
               

               
               3-375, gnl|Mm7|chr9 (56343670-56343322)
               


               
               398-944, gnl|bosTau2|chr3 (58009862-58010419)
               

               
               398-944, gnl|Mm7|chr9 (56343323-56341342)
               


               
               947-1108, gnl|bosTau2|chr3 (58010393-58010549)

	3-375, gnl\|bosTau2\|chr3 (58009509-58009863)
	3-375, gnl\|Hg17\|chr15 (75328983-75328600)
	3-375, gnl\|Mm7\|chr9 (56343670-56343322)

	398-944, gnl\|bosTau2\|chr3 (58009862-58010419)
	398-944, gnl\|Mm7\|chr9 (56343323-56341342)

	947-1108, gnl\|bosTau2\|chr3 (58010393-58010549)