Ss1.1-Pig4-TMW8041O20.3
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GCAGGACTTTATGTACCTTTCGCAGAGAGGGAATGATTTGGTGATGGAGTGCTCCCGCTG ACCGATGGACTCAAAGAAGAGAAGCTCACAAGAGGCTGAAGGATCCAAAGAAAGAGGCCT GGTCCATGTCTGGCAGGCAGGATCCTGTTCTGTAACACCAGAGAGATTGCCAGGCTGGAC AGGAAAGACTGTTCTTCAGGCAGCCCTTGGAGTGAAACACGGAGTTCTTCTGACAGAAGA TGGTGAGGTCTACAGCTTTGGGACTCTTCCCTGGAGAAGTGAACCAGCAGAGCTTTGTCC GAGTAGCCCCATTCTAGAAAATGCCCTGGTTGGGCAATATGTCGTTACTGTGGCAACAGG GAGTTTCCACAGCGGAGCAGTGACAGAAAGTGGCGTAGTGTACATGTGGGGGGAGAACTC TGCTGGCCAGTGTGCGGTAGCGAACCAGCAGTATGTTCCAGAACCCAATCCTGTCAGCAT TTCTGATTCTGAGACCAGCCCTTTGTTAGCAGTCAGGATCTTGCAGTTGGCATGCGGCGA GGAGCACACTCTGGCACTGTCCATAAGCAGAGAGATTTGGGCCTGGGGTACCGGTTGTCA GTTGGGTCTCATTACCACTACCTTCCCAGTGACAAAGCCACAAAAGGTGGAACATCTTGC TGGGCGAGTCGTGCTGCAAGTCGCCTGTGGTGCGTTCCACAGCTTAGCCCTGGTCCAGTG CCTACCTTCCCAGGACCTGAAGCCGGTGCCCGAAAGATGCAACCAGTGCAGCCAGCTCTT AATTACGATGACTGACAAGGAAGACCATGTGATCATATCCGACAGCCACTGTTGTCCATT AGGTGTGACCCTGTCAGAAAACCAGGCCAGCACTGCCATCACCCCCTCCACTGAAACCCT CGACAGCCAGGGAGAAGTATTTTAGAATGCTCTCACGCAGAATGCGCTGCCTGCTGCCAC CGAACTGAATGTTGGAAATGATCAGACCACGAGTGTTCAGACCATTTCCTCCCCACAAGA CGACATGGGGACAACTGAAATTCCTCCTGCAAGAAGCTCACCACCATACCCTGACCCTCA GGCAGTAAATGAATACGTGCAGTCAGATCATTCAGTAAGAGAAAACTCAGAGAATGGTGA AAAGCCAATGCCATCTCAGCCTCTTGTAGAAGAAGCAATTCCTAATCTTCACAGCCCACC AACCACAAGCACTTCAGCCCTAAACAGCCTAGTGGTCTCTTGTGCATCTGCTGTTGGTGT GAGAGTGGCTGCTACCTATGAAGCTGGGGCCTTGTCTCTTAAGAAAGTGATGAACTTTTA TAGTACAGTCCCTTGCGAACCCGGAGCTCAGGCAGGCAGTAGTTCCATGGGCCCTGAAGG TCTGAAAGATAGCAGAGAAGAACAGGTTAAACAGGAATCAATGCAAGGAAAGAAGAGTTC AAGTCTCGTGGATATCAGAGAAGAAGAATCAGAGGGAGGCACCCGAAGACTCTCCCTCCC TGGATTGTTGTCACAGGTTTCCCCCAGGCTCCTGAGAAGGGCTGCGAGGGTGAAAACGCG AACAGTGGTTCTGACCCCTACTTATAGCGGAGAAGCGGATGCCCTCCT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GCAGGACTTTATGTACCTTTCGCAGAGAGGGAATGATTTGGTGATGGAGTGCTCCCGCTG ACCGATGGACTCAAAGAAGAGAAGCTCACAAGAGGCTGAAGGATCCAAAGAAAGAGGCCT GGTCCATGTCTGGCAGGCAGGATCCTGTTCTGTAACACCAGAGAGATTGCCAGGCTGGAC AGGAAAGACTGTTCTTCAGGCAGCCCTTGGAGTGAAACACGGAGTTCTTCTGACAGAAGA TGGTGAGGTCTACAGCTTTGGGACTCTTCCCTGGAGAAGTGAACCAGCAGAGCTTTGTCC GAGTAGCCCCATTCTAGAAAATGCCCTGGTTGGGCAATATGTCGTTACTGTGGCAACAGG GAGTTTCCACAGCGGAGCAGTGACAGAAAGTGGCGTAGTGTACATGTGGGGGGAGAACTC TGCTGGCCAGTGTGCGGTAGCGAACCAGCAGTATGTTCCAGAACCCAATCCTGTCAGCAT TTCTGATTCTGAGACCAGCCCTTTGTTAGCAGTCAGGATCTTGCAGTTGGCATGCGGCGA GGAGCACACTCTGGCACTGTCCATAAGCAGAGAGATTTGGGCCTGGGGTACCGGTTGTCA GTTGGGTCTCATTACCACTACCTTCCCAGTGACAAAGCCACAAAAGGTGGAACATCTTGC TGGGCGAGTCGTGCTGCAAGTCGCCTGTGGTGCGTTCCACAGCTTAGCCCTGGTCCAGTG CCTACCTTCCCAGGACCTGAAGCCGGTGCCCGAAAGATGCAACCAGTGCAGCCAGCTCTT AATTACGATGACTGACAAGGAAGACCATGTGATCATATCCGACAGCCACTGTTGTCCATT AGGTGTGACCCTGTCAGAAAACCAGGCCAGCACTGCCATCACCCCCTCCACTGAAACCCT CGACAGCCAGGGAGAAGTATTTTAGAATGCTCTCACGCAGAATGCGCTGCCTGCTGCCAC CGAACTGAATGTTGGAAATGATCAGACCACGAGTGTTCAGACCATTTCCTCCCCACAAGA CGACATGGGGACAACTGAAATTCCTCCTGCAAGAAGCTCACCACCATACCCTGACCCTCA GGCAGTAAATGAATACGTGCAGTCAGATCATTCAGTAAGAGAAAACTCAGAGAATGGTGA AAAGCCAATGCCATCTCAGCCTCTTGTAGAAGAAGCAATTCCTAATCTTCACAGCCCACC AACCACAAGCACTTCAGCCCTAAACAGCCTAGTGGTCTCTTGTGCATCTGCTGTTGGTGT GAGAGTGGCTGCTACCTATGAAGCTGGGGCCTTGTCTCTTAAGAAAGTGATGAACTTTTA TAGTACAGTCCCTTGCGAACCCGGAGCTCAGGCAGGCAGTAGTTCCATGGGCCCTGAAGG TCTGAAAGATAGCAGAGAAGAACAGGTTAAACAGGAATCAATGCAAGGAAAGAAGAGTTC AAGTCTCGTGGATATCAGAGAAGAAGAATCAGAGGGAGGCACCCGAAGACTCTCCCTCCC TGGATTGTTGTCACAGGTTTCCCCCAGGCTCCTGAGAAGGGCTGCGAGGGTGAAAACGCG AACAGTGGTTCTGACCCCTACTTATAGCGGAGAAGCGGATGCCCTCCT |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 238-436, + strand, RNAz p=0.833393 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 238-436, + strand, RNAz p=0.833393 |
| Aligned organism(s): 22 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
| 238-1159, gnl|bosTau2|chr2 (52715896-52716832) | |
| 238-1159, gnl|Hg17|chr2 (202452049-202451110) | |
| 238-1159, gnl|Mm7|chr1 (59467181-59466260) | |
| 1500-1608, gnl|bosTau2|chr2 (52721635-52721740) | |
| 1500-1608, gnl|canFam2|chr37 (13800937-13801137) | |
| 1500-1608, gnl|danRer3|chr9 (16264467-16264291) | |
| 1500-1608, gnl|dasNov1|scaffold_228568 (2964-2764) | |
| 1500-1608, gnl|echTel1|scaffold_323497 (117171-116979) | |
| 1500-1608, gnl|fr1|chrUn (88846100-88845916) | |
| 1500-1608, gnl|galGal2|chr7 (12463044-12463232) | |
| 1500-1608, gnl|hg17|chr2 (202444726-202444926) | |
| 1500-1608, gnl|Hg17|chr2 (202444915-202444810) | |
| 1500-1608, gnl|loxAfr1|scaffold_80126 (4771-4579) | |
| 1500-1608, gnl|mm7|chr1 (59460101-59460300) | |
| 1500-1608, gnl|Mm7|chr1 (59460290-59460185) | |
| 1500-1608, gnl|monDom2|scaffold_39 (22742196-22742015) | |
| 1500-1608, gnl|oryCun1|scaffold_214669 (79601-79795) | |
| 1500-1608, gnl|panTro1|chr13 (92432829-92433034) | |
| 1500-1608, gnl|rheMac2|chr12 (65556728-65556928) | |
| 1500-1608, gnl|rn3|chr9 (57933971-57934170) | |
| 1500-1608, gnl|tetNig1|chr3 (265342-265148) | |
| 1500-1608, gnl|xenTro1|scaffold_168 (383358-383159) |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 238-1159, gnl|bosTau2|chr2 (52715896-52716832) | |
| 238-1159, gnl|Hg17|chr2 (202452049-202451110) | |
| 238-1159, gnl|Mm7|chr1 (59467181-59466260) | |
| 1500-1608, gnl|bosTau2|chr2 (52721635-52721740) | |
| 1500-1608, gnl|canFam2|chr37 (13800937-13801137) | |
| 1500-1608, gnl|danRer3|chr9 (16264467-16264291) | |
| 1500-1608, gnl|dasNov1|scaffold_228568 (2964-2764) | |
| 1500-1608, gnl|echTel1|scaffold_323497 (117171-116979) | |
| 1500-1608, gnl|fr1|chrUn (88846100-88845916) | |
| 1500-1608, gnl|galGal2|chr7 (12463044-12463232) | |
| 1500-1608, gnl|hg17|chr2 (202444726-202444926) | |
| 1500-1608, gnl|Hg17|chr2 (202444915-202444810) | |
| 1500-1608, gnl|loxAfr1|scaffold_80126 (4771-4579) | |
| 1500-1608, gnl|mm7|chr1 (59460101-59460300) | |
| 1500-1608, gnl|Mm7|chr1 (59460290-59460185) | |
| 1500-1608, gnl|monDom2|scaffold_39 (22742196-22742015) | |
| 1500-1608, gnl|oryCun1|scaffold_214669 (79601-79795) | |
| 1500-1608, gnl|panTro1|chr13 (92432829-92433034) | |
| 1500-1608, gnl|rheMac2|chr12 (65556728-65556928) | |
| 1500-1608, gnl|rn3|chr9 (57933971-57934170) | |
| 1500-1608, gnl|tetNig1|chr3 (265342-265148) | |
| 1500-1608, gnl|xenTro1|scaffold_168 (383358-383159) |