Non-Coding RNA Search

Ss1.1-Pig4-TMW8042K20.5

Sequence:


               
               TCTTGCTGTGGGGTATTCCCTTTCACTAGTGATAAGAATTTAAAAGGAATCTTTTTCTGT
CTAGTGCCATTCACCTGTTGAAACCTGTTGAAACCACACCCCTCTAGTGAGTTTTAGCAG
GGAGGGATTTGGTATAGGAAATTAGGTCCTTCATGTATCTTGGAGGAGCTGGAAGAGCAG
GCCCTGGGTTGAATTTCTAAGAATGACTCCCAGAACAACATTGTAGAACTGGCTAGCCAG
GGAAACTGCTAATAAAAAAAGCTCTAATGAAAAAAGCTGAGCAATTAGGCAGCCTCCCAT
ATTACAGCAACTCAGGTCAGGACCCCATAGTCTGGCTGGTGAAACGGTGTGGTTGTTGAC
TGTTAACTCTTCAGCTTTGAAGTTGGGCATAGAATACCAGGACTTCAGCCTCAGAAGCAC
AGCCCTGCCTTAGGGTGCTGCCTCTTCCTTTCAGATCTGTCATGTCTGGCAGAAGCTCTG
GCATTTCAGTCTTTTTTTTTTCTCTTGCTGTCTGTTATGCAAAAAGAGGGCTAGAGTAGA
TTTGAATGAACAAGTATGCAGCAGTTAACCCAAGTGTTTTGCCTGTGAGTATAGAAATCA
AAGATGGGCCAGTGTGACTCTCCACAGAACCTGGGGCTGTTTGTCTTGCTGAAATAATTT
CATTGAGATGCTAAGAAAGTAGATGAGCTGAGGAGCCAGGTGCAATGAAAGTTGTGGGGT
TTTTGTCTTTTTTGAAAAATTATAGTTTTATTTTTAATTTAATTTAATTTTTTGTGCTTT
TTAGGGCTACACCCACAGCATATGGAGGTTCCCAGGCTAGGGGTCCAGCCTGAGCTACAG
CTGCCGACCTAC------------------------------------------------
------------------------------------------------------------
------------TTTAGTTAATTTACCATGTTGTGTTAGTTTCGAGTGTACAGCAAAGTG
ATTCAGTTATACATATATATTCTTTTACAGAGTCTGTTCCATTATAGGTTATTACAAGAT
ACTGAATATATGTTTATTTTTTTGTTTATTTGTTTGTTTTGTTTTTTCTCTTGAAGGCAT
TTCTTTAGGTCAGTCACTTCTGGAAAGTTATGGCCAAAAGGTCATACTCCTGGATCAAAC
TTGATTATTCTGTAGTTTGGAAATATGAGAGTTCAACTCTACATGAATATATCGGTGTTT
AAATATTTAGGTTAGTGTTCTGTCCTACTTTGTGATATTTTTGTATATCTGAATATTAAA
GGTCTTTAATATGTAGAAGGGGGA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TCTTGCTGTGGGGTATTCCCTTTCACTAGTGATAAGAATTTAAAAGGAATCTTTTTCTGT
CTAGTGCCATTCACCTGTTGAAACCTGTTGAAACCACACCCCTCTAGTGAGTTTTAGCAG
GGAGGGATTTGGTATAGGAAATTAGGTCCTTCATGTATCTTGGAGGAGCTGGAAGAGCAG
GCCCTGGGTTGAATTTCTAAGAATGACTCCCAGAACAACATTGTAGAACTGGCTAGCCAG
GGAAACTGCTAATAAAAAAAGCTCTAATGAAAAAAGCTGAGCAATTAGGCAGCCTCCCAT
ATTACAGCAACTCAGGTCAGGACCCCATAGTCTGGCTGGTGAAACGGTGTGGTTGTTGAC
TGTTAACTCTTCAGCTTTGAAGTTGGGCATAGAATACCAGGACTTCAGCCTCAGAAGCAC
AGCCCTGCCTTAGGGTGCTGCCTCTTCCTTTCAGATCTGTCATGTCTGGCAGAAGCTCTG
GCATTTCAGTCTTTTTTTTTTCTCTTGCTGTCTGTTATGCAAAAAGAGGGCTAGAGTAGA
TTTGAATGAACAAGTATGCAGCAGTTAACCCAAGTGTTTTGCCTGTGAGTATAGAAATCA
AAGATGGGCCAGTGTGACTCTCCACAGAACCTGGGGCTGTTTGTCTTGCTGAAATAATTT
CATTGAGATGCTAAGAAAGTAGATGAGCTGAGGAGCCAGGTGCAATGAAAGTTGTGGGGT
TTTTGTCTTTTTTGAAAAATTATAGTTTTATTTTTAATTTAATTTAATTTTTTGTGCTTT
TTAGGGCTACACCCACAGCATATGGAGGTTCCCAGGCTAGGGGTCCAGCCTGAGCTACAG
CTGCCGACCTAC------------------------------------------------
------------------------------------------------------------
------------TTTAGTTAATTTACCATGTTGTGTTAGTTTCGAGTGTACAGCAAAGTG
ATTCAGTTATACATATATATTCTTTTACAGAGTCTGTTCCATTATAGGTTATTACAAGAT
ACTGAATATATGTTTATTTTTTTGTTTATTTGTTTGTTTTGTTTTTTCTCTTGAAGGCAT
TTCTTTAGGTCAGTCACTTCTGGAAAGTTATGGCCAAAAGGTCATACTCCTGGATCAAAC
TTGATTATTCTGTAGTTTGGAAATATGAGAGTTCAACTCTACATGAATATATCGGTGTTT
AAATATTTAGGTTAGTGTTCTGTCCTACTTTGTGATATTTTTGTATATCTGAATATTAAA
GGTCTTTAATATGTAGAAGGGGGA

Aligned organism(s): 1 entry(ies)

More info

Aligned organism(s): 1 entry(ies)

Help | Less info


               
               855-970, gnl|bosTau2|chr3 (58527539-58527424)

Aligned organism(s): 1 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               855-970, gnl|bosTau2|chr3 (58527539-58527424)