Ss1.1-Pig4-TMW8042P20.5
|
CGTGTAGTCCAGATCCATCACGGGCTGGGTGTTGAGCAGCGCCGGGATGCGGGAGTACAG
TTGGCCGTCACCAGCCAGCACCTCCACCACCTTCATCTTGGGGCTGGCCATGTTCTCCAG
GGCGGTGTCCACGCACGCCTTGAGTGCCGGGGCGTCGAGGAGGCCGCTGAGCAGGGGGTC
ATCACACAGCAGAGGCCTCTCCTGGGCCAGCACCTGGCCCAGTTCCAGCTGCAGGTTCCC
GTTGAGTTGCAGCTGGCAGGCGGCAGCCAGCAGCCGAGGCAGGCTCTGCTGCGGGGCCTC
CCGGGGGGCCTGGGCACCGTCCAGCCCAGGCACCACCATCTTCAGCCCCTGCTGGGCCAC
CTTGGTCTGCAGTGCCTGTGCCAGCCCCCTGCACAGCTGCAGCTCCTCCTGCAGGGCCGT
GTTCCCGGCCAGGCACCCGCTCTCCACGTGGGGTGTGAAGCAGAACTTCTCCAGGATAGG
CTTGAGATGCTCCTGGGGTCGCCGTGGGGCCACTGAGGAGTGGGCCCCCAAGAAGAGGGC
GCCTCCAGCCACCACTGTGTTCAGATTCCTGTCCACCACCACGTCGGCCGCTTGGGTGGT
GTCCTGCAGCGTGTACAGCTTCTGCCGGTGGGTGAC
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
CGTGTAGTCCAGATCCATCACGGGCTGGGTGTTGAGCAGCGCCGGGATGCGGGAGTACAG
TTGGCCGTCACCAGCCAGCACCTCCACCACCTTCATCTTGGGGCTGGCCATGTTCTCCAG
GGCGGTGTCCACGCACGCCTTGAGTGCCGGGGCGTCGAGGAGGCCGCTGAGCAGGGGGTC
ATCACACAGCAGAGGCCTCTCCTGGGCCAGCACCTGGCCCAGTTCCAGCTGCAGGTTCCC
GTTGAGTTGCAGCTGGCAGGCGGCAGCCAGCAGCCGAGGCAGGCTCTGCTGCGGGGCCTC
CCGGGGGGCCTGGGCACCGTCCAGCCCAGGCACCACCATCTTCAGCCCCTGCTGGGCCAC
CTTGGTCTGCAGTGCCTGTGCCAGCCCCCTGCACAGCTGCAGCTCCTCCTGCAGGGCCGT
GTTCCCGGCCAGGCACCCGCTCTCCACGTGGGGTGTGAAGCAGAACTTCTCCAGGATAGG
CTTGAGATGCTCCTGGGGTCGCCGTGGGGCCACTGAGGAGTGGGCCCCCAAGAAGAGGGC
GCCTCCAGCCACCACTGTGTTCAGATTCCTGTCCACCACCACGTCGGCCGCTTGGGTGGT
GTCCTGCAGCGTGTACAGCTTCTGCCGGTGGGTGAC
|
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
273-366, + strand, RNAmicro p=0.989648 |
PigEST conread start position and end position of the predicted microRNA,
PigEST conread reading direction of prediction,
miRNA classificator p of RNAmicro
|
273-366, + strand, RNAmicro p=0.989648 |
|
3' of BC063242, - |
|
3' of BC063242, - |
Human gene identifier and UTR site,
human gene reading direction
|
3' of BC063242, - |
|
3' of BC063242, - |
|
79-387, gnl|bosTau2|chr19 (44288203-44288511) |
|
79-387, gnl|canFam2|chr9 (3242442-3242146) |
|
79-387, gnl|danRer3|chr12 (31295910-31296214) |
|
79-387, gnl|echTel1|scaffold_135615 (718-993) |
|
79-387, gnl|fr1|chrUn (240821455-240821154) |
|
79-387, gnl|galGal2|chr18 (4733713-4733413) |
|
79-387, gnl|hg17|chr17 (77637413-77637709) |
|
79-387, gnl|Hg17|chr17 (77637416-77637724) |
|
79-387, gnl|loxAfr1|scaffold_86983 (6115-5817) |
|
79-387, gnl|mm7|chr11 (120923516-120923794) |
|
79-387, gnl|Mm7|chr11 (120923519-120923809) |
|
79-387, gnl|monDom2|scaffold_18 (15675877-15676179) |
|
79-387, gnl|panTro1|chr19 (81402290-81402586) |
|
79-387, gnl|rheMac2|chr16 (77557422-77557718) |
|
79-387, gnl|tetNig1|chrUn_random (51803676-51803973) |
|
79-387, gnl|xenTro1|scaffold_413 (900962-901271) |
| |
|
392-596, gnl|bosTau2|chr19 (44289102-44289307) |
|
392-596, gnl|Hg17|chr17 (77638220-77638425) |
|
392-596, gnl|Mm7|chr11 (120924062-120924267) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
79-387, gnl|bosTau2|chr19 (44288203-44288511) |
|
79-387, gnl|canFam2|chr9 (3242442-3242146) |
|
79-387, gnl|danRer3|chr12 (31295910-31296214) |
|
79-387, gnl|echTel1|scaffold_135615 (718-993) |
|
79-387, gnl|fr1|chrUn (240821455-240821154) |
|
79-387, gnl|galGal2|chr18 (4733713-4733413) |
|
79-387, gnl|hg17|chr17 (77637413-77637709) |
|
79-387, gnl|Hg17|chr17 (77637416-77637724) |
|
79-387, gnl|loxAfr1|scaffold_86983 (6115-5817) |
|
79-387, gnl|mm7|chr11 (120923516-120923794) |
|
79-387, gnl|Mm7|chr11 (120923519-120923809) |
|
79-387, gnl|monDom2|scaffold_18 (15675877-15676179) |
|
79-387, gnl|panTro1|chr19 (81402290-81402586) |
|
79-387, gnl|rheMac2|chr16 (77557422-77557718) |
|
79-387, gnl|tetNig1|chrUn_random (51803676-51803973) |
|
79-387, gnl|xenTro1|scaffold_413 (900962-901271) |
| |
|
392-596, gnl|bosTau2|chr19 (44289102-44289307) |
|
392-596, gnl|Hg17|chr17 (77638220-77638425) |
|
392-596, gnl|Mm7|chr11 (120924062-120924267) |
