Ss1.1-Pig4-TMW8043A12.3
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GAAAGTTCCAAATACTTACCTGTACCTGATGCTGCTGATAAAATCAGGATGGCTTTAAAC TCAGGATCGCGGCCAGGTGTCGGGCCTTACTATGAAAACCACGGATACCAACCTGAAAGT GTCTACCCCCCGCAGCCCCCCGGGGCCCACAGGCCCTATGGGGCGTATCCGGCTCAGTAC CACCCGCCCTCGGTCCCCCAGTATGCCCCGAGGGTGCAGACGCACGCTTCCACACCCGCC GTCGTCGTCAGCAGGCAGCCCAAACCCCGATCCAGGACGATGTGCTCTTCAAAGACCAAG AAAGCGCTGTGCATCACCTTTGCTCTGGGGGCCATCCTGGCAGGAGCAGTGCTGGCCACC GTCCTGCTCTGGAAGTTCATGGAGAAGAAGAGGTGCTCCACGCCCGAGATGGAGTGCGGC TCTTCTGGGACCTGCATCAGCCCCTCTCACTGGTGCGATGGCATCCTGCACTGTCCCGGC GGCGAGGACGAGAACCAGTGCGTTCGCCTGTACGGACCCAACTTCATTCTTCAGGTGTAC TCGGCTCAGAGGAAGTCCTGGTACCCAGTGTGCCAGGACGACTGGACTGAGAACTACGGG AGGGCGGCGTGCCAGGACATGGGCTACCGGAATAGCTTTTTTTCTAGCCAAGGAATCGCC GATGACAGCGGGGCCACGAGCTTTATGAAGCTGAACAAAAGTGCCAAA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GAAAGTTCCAAATACTTACCTGTACCTGATGCTGCTGATAAAATCAGGATGGCTTTAAAC TCAGGATCGCGGCCAGGTGTCGGGCCTTACTATGAAAACCACGGATACCAACCTGAAAGT GTCTACCCCCCGCAGCCCCCCGGGGCCCACAGGCCCTATGGGGCGTATCCGGCTCAGTAC CACCCGCCCTCGGTCCCCCAGTATGCCCCGAGGGTGCAGACGCACGCTTCCACACCCGCC GTCGTCGTCAGCAGGCAGCCCAAACCCCGATCCAGGACGATGTGCTCTTCAAAGACCAAG AAAGCGCTGTGCATCACCTTTGCTCTGGGGGCCATCCTGGCAGGAGCAGTGCTGGCCACC GTCCTGCTCTGGAAGTTCATGGAGAAGAAGAGGTGCTCCACGCCCGAGATGGAGTGCGGC TCTTCTGGGACCTGCATCAGCCCCTCTCACTGGTGCGATGGCATCCTGCACTGTCCCGGC GGCGAGGACGAGAACCAGTGCGTTCGCCTGTACGGACCCAACTTCATTCTTCAGGTGTAC TCGGCTCAGAGGAAGTCCTGGTACCCAGTGTGCCAGGACGACTGGACTGAGAACTACGGG AGGGCGGCGTGCCAGGACATGGGCTACCGGAATAGCTTTTTTTCTAGCCAAGGAATCGCC GATGACAGCGGGGCCACGAGCTTTATGAAGCTGAACAAAAGTGCCAAA |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 502-621, + strand, RNAz p=0.507363 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 502-621, + strand, RNAz p=0.507363 |
| Aligned organism(s): 22 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
| 64-292, gnl|bosTau2|chr1 (93511204-93510982) | |
| 64-292, gnl|canFam2|chr31 (38283165-38283412) | |
| 64-292, gnl|echTel1|scaffold_279714 (29421-29171) | |
| 64-292, gnl|hg17|chr21 (41788120-41788368) | |
| 64-292, gnl|Hg17|chr21 (41788375-41788153) | |
| 64-292, gnl|loxAfr1|scaffold_60663 (3841-4047) | |
| 64-292, gnl|mm7|chr16 (97980469-97980710) | |
| 64-292, gnl|Mm7|chr16 (97980717-97980498) | |
| 64-292, gnl|monDom2|scaffold_29 (1691532-1691291) | |
| 64-292, gnl|panTro1|chr22 (41836444-41836692) | |
| 64-292, gnl|rheMac2|chr3 (5156569-5156321) | |
| 64-292, gnl|rn3|chr11 (37659231-37659472) | |
| 502-630, gnl|bosTau2|chr1 (93501196-93501068) | |
| 502-630, gnl|canFam2|chr31 (38272657-38272852) | |
| 502-630, gnl|hg17|chr21 (41774209-41774429) | |
| 502-630, gnl|Hg17|chr21 (41774400-41774272) | |
| 502-630, gnl|mm7|chr16 (97962229-97962446) | |
| 502-630, gnl|Mm7|chr16 (97962415-97962287) | |
| 502-630, gnl|oryCun1|scaffold_151923 (7968-8138) | |
| 502-630, gnl|panTro1|chr22 (41822503-41822723) | |
| 502-630, gnl|rheMac2|chr3 (5167296-5167076) | |
| 502-630, gnl|rn3|chr11 (37647976-37648191) |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 64-292, gnl|bosTau2|chr1 (93511204-93510982) | |
| 64-292, gnl|canFam2|chr31 (38283165-38283412) | |
| 64-292, gnl|echTel1|scaffold_279714 (29421-29171) | |
| 64-292, gnl|hg17|chr21 (41788120-41788368) | |
| 64-292, gnl|Hg17|chr21 (41788375-41788153) | |
| 64-292, gnl|loxAfr1|scaffold_60663 (3841-4047) | |
| 64-292, gnl|mm7|chr16 (97980469-97980710) | |
| 64-292, gnl|Mm7|chr16 (97980717-97980498) | |
| 64-292, gnl|monDom2|scaffold_29 (1691532-1691291) | |
| 64-292, gnl|panTro1|chr22 (41836444-41836692) | |
| 64-292, gnl|rheMac2|chr3 (5156569-5156321) | |
| 64-292, gnl|rn3|chr11 (37659231-37659472) | |
| 502-630, gnl|bosTau2|chr1 (93501196-93501068) | |
| 502-630, gnl|canFam2|chr31 (38272657-38272852) | |
| 502-630, gnl|hg17|chr21 (41774209-41774429) | |
| 502-630, gnl|Hg17|chr21 (41774400-41774272) | |
| 502-630, gnl|mm7|chr16 (97962229-97962446) | |
| 502-630, gnl|Mm7|chr16 (97962415-97962287) | |
| 502-630, gnl|oryCun1|scaffold_151923 (7968-8138) | |
| 502-630, gnl|panTro1|chr22 (41822503-41822723) | |
| 502-630, gnl|rheMac2|chr3 (5167296-5167076) | |
| 502-630, gnl|rn3|chr11 (37647976-37648191) |