Non-Coding RNA Search

Ss1.1-Pig4-TMW8043I10.3

Sequence:


               
               GATGGAGATGCTTGGATCACGTCTCGGATTCCTGTTGTTCAGGCGAGCACCGTTTCCGGA
GCACCTGCTGCGCGGAAATCACAGTGAGGGCCAGTGGGGCGCAGGGATGAAGGAGAGCAG
CCTGGAAGGGGGAAAAGCCGGGCTCGTGCAAAAGAAAGCCAGCCCCACAGCACAGCAGAG
GATAGCATTAGAGGAATCTCAGAGTTGGGGCACACGTAACCTTGCTGCCGGCTCCATCCT
TCCCCCTCTTTCTTTCTGGTTAGATTTCCCTTGCATTGCATGCTTTTCTCCTCCTTTGCT
CACCGAGTCCTCTGATGGCTCAGAGCAGCCGTGGCACTGATACGCCGTGATCTGGAATGA
CCGTGGGCTCTGCCCAGAAATGTCAATAGCATTCACTTTAATAAAACATGAACCCTGACA
ACGCCTTGGTCAGAGGCAAGCCTGGTGTAAAAATGTCGGCCTGTGAAGTTGGCAGTCCAG
CCAACCCGTTTTTAAGGATGCTGTAAAATCCTTCCCATAAATAATGTTGAAGGAGGAAAG
AAAAAAGAGCTGAACTTCTCAAAGTGTCACCTTTCTTTATCAGCCTCCCAACCAGGAAGG
CAAGGATGCCATTCCTTCCTGGGAGATGAAAACTTAAGCTTAGATTATGTTGTGTATGAA
GACCTCAGAGAGGAGGGGGAAAACCCAAAACCTAAACCCTCATTAAAAAAAAAAAAAAAA
AGGCACTTTTTATGTCGCCATGAAAGAGAAACAGTGAATGCCCACAGCAGTCACAGCTGA
GATGAAGGGAGTGTCTCTTGCCAGCAGCTTTGCGATATGAATAAAAATCACCGTCTTGTG
CCCATAATTTCATGACCCGCAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GATGGAGATGCTTGGATCACGTCTCGGATTCCTGTTGTTCAGGCGAGCACCGTTTCCGGA
GCACCTGCTGCGCGGAAATCACAGTGAGGGCCAGTGGGGCGCAGGGATGAAGGAGAGCAG
CCTGGAAGGGGGAAAAGCCGGGCTCGTGCAAAAGAAAGCCAGCCCCACAGCACAGCAGAG
GATAGCATTAGAGGAATCTCAGAGTTGGGGCACACGTAACCTTGCTGCCGGCTCCATCCT
TCCCCCTCTTTCTTTCTGGTTAGATTTCCCTTGCATTGCATGCTTTTCTCCTCCTTTGCT
CACCGAGTCCTCTGATGGCTCAGAGCAGCCGTGGCACTGATACGCCGTGATCTGGAATGA
CCGTGGGCTCTGCCCAGAAATGTCAATAGCATTCACTTTAATAAAACATGAACCCTGACA
ACGCCTTGGTCAGAGGCAAGCCTGGTGTAAAAATGTCGGCCTGTGAAGTTGGCAGTCCAG
CCAACCCGTTTTTAAGGATGCTGTAAAATCCTTCCCATAAATAATGTTGAAGGAGGAAAG
AAAAAAGAGCTGAACTTCTCAAAGTGTCACCTTTCTTTATCAGCCTCCCAACCAGGAAGG
CAAGGATGCCATTCCTTCCTGGGAGATGAAAACTTAAGCTTAGATTATGTTGTGTATGAA
GACCTCAGAGAGGAGGGGGAAAACCCAAAACCTAAACCCTCATTAAAAAAAAAAAAAAAA
AGGCACTTTTTATGTCGCCATGAAAGAGAAACAGTGAATGCCCACAGCAGTCACAGCTGA
GATGAAGGGAGTGTCTCTTGCCAGCAGCTTTGCGATATGAATAAAAATCACCGTCTTGTG
CCCATAATTTCATGACCCGCAAAA

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

Help | Less info


               
               330-448, - strand, RNAz p=0.898185

Predicted RNA structure(s): 1 entry(ies)

Help | Less info

PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               330-448, - strand, RNAz p=0.898185

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

Help | Less info


               
               186-858, gnl|bosTau2|chr4 (45785304-45785966)
               

               
               186-858, gnl|Hg17|chr7 (41810457-41809824)

Aligned organism(s): 2 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               186-858, gnl|bosTau2|chr4 (45785304-45785966)
               

               
               186-858, gnl|Hg17|chr7 (41810457-41809824)

	186-858, gnl\|bosTau2\|chr4 (45785304-45785966)
	186-858, gnl\|Hg17\|chr7 (41810457-41809824)