Ss1.1-Pig4-TMW8043M02.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CTTGGAAGGGTGTCCTTCTTATTCTCTGCTAATAACTTCTTAGCCTGATTTATACCCCAG TTTCCTTGATGATGACTTGCTGCCAAGTAATTATGAAGACTTTGTTTTTTCCTGATTATT GCATGAAGGCTACCAAGTTGGAACAGGCAAGTCCTGGATGTGAAAGCTTTAATTTATCTA CCTCATTTATTTGTTATTTTTGTAGCGATAGTCTCTATTTTCCTATTGGATGACCGCTGA AGTGTTCCAAGGCCCTGTCTCAAACCTAAGAGTTGCTGTATTGGTGGGAACAGCTGGACG TTCGGGATGTAGATGTCTTTGTGCTTCTCTTTTTCTTAATCCCCTTTTTGTATATGTAAT ATGAAACCGACGATGAAGCGTTACTCAAAAGGATTTAACAAGGAAGGAGAAAGACCCACA TTTCTGGGCGGAGAAGTTTCTGCCCCTCTTTGTGGAAGAGCGGACTGTGACTATTACCAA AAGTTTGTCTCTCCGTGATTGCACCCGTCTTTAGGATCCAAAAAAAAACAAAAAAAAACA AAAAAAACTTTTTTTCCCTTTTTTGCCAAGTTGTGCCTTTCCTTCTGGAATTGTAAGTGA TCACAATAATAGTACCTGTTTACACTGTGAAGTGGATATTGTTACAGAAGACACCACCAG AGGCTTTCTCACTTGTTAAGCTAATAAATAATGCCTTGTTGAATGTAT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CTTGGAAGGGTGTCCTTCTTATTCTCTGCTAATAACTTCTTAGCCTGATTTATACCCCAG TTTCCTTGATGATGACTTGCTGCCAAGTAATTATGAAGACTTTGTTTTTTCCTGATTATT GCATGAAGGCTACCAAGTTGGAACAGGCAAGTCCTGGATGTGAAAGCTTTAATTTATCTA CCTCATTTATTTGTTATTTTTGTAGCGATAGTCTCTATTTTCCTATTGGATGACCGCTGA AGTGTTCCAAGGCCCTGTCTCAAACCTAAGAGTTGCTGTATTGGTGGGAACAGCTGGACG TTCGGGATGTAGATGTCTTTGTGCTTCTCTTTTTCTTAATCCCCTTTTTGTATATGTAAT ATGAAACCGACGATGAAGCGTTACTCAAAAGGATTTAACAAGGAAGGAGAAAGACCCACA TTTCTGGGCGGAGAAGTTTCTGCCCCTCTTTGTGGAAGAGCGGACTGTGACTATTACCAA AAGTTTGTCTCTCCGTGATTGCACCCGTCTTTAGGATCCAAAAAAAAACAAAAAAAAACA AAAAAAACTTTTTTTCCCTTTTTTGCCAAGTTGTGCCTTTCCTTCTGGAATTGTAAGTGA TCACAATAATAGTACCTGTTTACACTGTGAAGTGGATATTGTTACAGAAGACACCACCAG AGGCTTTCTCACTTGTTAAGCTAATAAATAATGCCTTGTTGAATGTAT |
| Aligned organism(s): 81 entry(ies) | More info |
| Aligned organism(s): 81 entry(ies) | Help | Less info |
| 3-519, gnl|bosTau2|chr13 (58371154-58371670) | |
| 3-519, gnl|Hg17|chr20 (49833056-49832524) | |
| 546-708, gnl|bosTau2|chr13 (58371678-58371836) | |
| 546-708, gnl|canFam2|chr21 (30306699-30306548) | |
| 546-708, gnl|canFam2|chr24 (40921495-40921379) | |
| 546-708, gnl|canFam2|chr24 (40921802-40921345) | |
| 546-708, gnl|canFam2|chr24 (40921345-40921498) | |
| 546-708, gnl|canFam2|chr24 (40921531-40921345) | |
| 546-708, gnl|canFam2|chr24 (40921571-40921346) | |
| 546-708, gnl|canFam2|chr36 (17190292-17189996) | |
| 546-708, gnl|dasNov1|scaffold_84950 (6371-6493) | |
| 546-708, gnl|dasNov1|scaffold_84950 (6056-6525) | |
| 546-708, gnl|dasNov1|scaffold_84950 (6370-6525) | |
| 546-708, gnl|dasNov1|scaffold_84950 (6525-6204) | |
| 546-708, gnl|dasNov1|scaffold_84950 (6525-6369) | |
| 546-708, gnl|dasNov1|scaffold_84950 (6335-6525) | |
| 546-708, gnl|dasNov1|scaffold_84950 (6288-6524) | |
| 546-708, gnl|echTel1|scaffold_277629 (55227-55345) | |
| 546-708, gnl|echTel1|scaffold_277629 (54903-55378) | |
| 546-708, gnl|echTel1|scaffold_277629 (55219-55378) | |
| 546-708, gnl|echTel1|scaffold_277629 (55378-55047) | |
| 546-708, gnl|echTel1|scaffold_277629 (55378-55227) | |
| 546-708, gnl|echTel1|scaffold_277629 (55173-55378) | |
| 546-708, gnl|echTel1|scaffold_277629 (55122-55377) | |
| 546-708, gnl|hg17|chr12 (67425578-67425761) | |
| 546-708, gnl|hg17|chr15 (64505086-64505406) | |
| 546-708, gnl|hg17|chr16 (20079596-20079723) | |
| 546-708, gnl|hg17|chr20 (49832360-49832529) | |
| 546-708, gnl|Hg17|chr20 (49832516-49832360) | |
| 546-708, gnl|hg17|chr3 (42340576-42341058) | |
| 546-708, gnl|hg17|chr5 (56757236-56757485) | |
| 546-708, gnl|hg17|chrX (128740929-128741108) | |
| 546-708, gnl|loxAfr1|scaffold_15490 (54472-54363) | |
| 546-708, gnl|loxAfr1|scaffold_15490 (54804-54331) | |
| 546-708, gnl|loxAfr1|scaffold_15490 (54479-54331) | |
| 546-708, gnl|loxAfr1|scaffold_15490 (54331-54658) | |
| 546-708, gnl|loxAfr1|scaffold_15490 (54331-54473) | |
| 546-708, gnl|loxAfr1|scaffold_15490 (54517-54331) | |
| 546-708, gnl|loxAfr1|scaffold_15490 (54575-54332) | |
| 546-708, gnl|mm7|chr2 (168541220-168541072) | |
| 546-708, gnl|mm7|chr2 (168541573-168541055) | |
| 546-708, gnl|mm7|chr2 (168541055-168541240) | |
| 546-708, gnl|mm7|chr2 (168541274-168541055) | |
| 546-708, gnl|mm7|chr2 (168541328-168541059) | |
| 546-708, gnl|Mm7|chr2 (168541212-168541055) | |
| 546-708, gnl|mm7|chr6 (148689034-148689203) | |
| 546-708, gnl|monDom2|scaffold_1 (164001271-164001143) | |
| 546-708, gnl|monDom2|scaffold_1 (164001594-164001114) | |
| 546-708, gnl|monDom2|scaffold_1 (164001307-164001114) | |
| 546-708, gnl|monDom2|scaffold_1 (164001114-164001452) | |
| 546-708, gnl|monDom2|scaffold_1 (164001114-164001275) | |
| 546-708, gnl|monDom2|scaffold_1 (164001300-164001114) | |
| 546-708, gnl|monDom2|scaffold_1 (164001354-164001115) | |
| 546-708, gnl|oryCun1|scaffold_103451 (4160-4056) | |
| 546-708, gnl|oryCun1|scaffold_103451 (4448-4024) | |
| 546-708, gnl|oryCun1|scaffold_103451 (4164-4024) | |
| 546-708, gnl|oryCun1|scaffold_103451 (4024-4300) | |
| 546-708, gnl|oryCun1|scaffold_103451 (4024-4165) | |
| 546-708, gnl|oryCun1|scaffold_103451 (4199-4024) | |
| 546-708, gnl|oryCun1|scaffold_103451 (4233-4025) | |
| 546-708, gnl|panTro1|chr10 (68955279-68955462) | |
| 546-708, gnl|panTro1|chr16 (65012301-65012621) | |
| 546-708, gnl|panTro1|chr18 (20546697-20546828) | |
| 546-708, gnl|panTro1|chr21 (52598113-52598280) | |
| 546-708, gnl|panTro1|chr2_random (36414302-36413822) | |
| 546-708, gnl|panTro1|chr4 (59452114-59451865) | |
| 546-708, gnl|panTro1|chrX (132975125-132975304) | |
| 546-708, gnl|rheMac2|chr10 (12681887-12681718) | |
| 546-708, gnl|rheMac2|chr11 (65741831-65742023) | |
| 546-708, gnl|rheMac2|chr2 (94269121-94268631) | |
| 546-708, gnl|rheMac2|chr20 (19158051-19158183) | |
| 546-708, gnl|rheMac2|chr6 (55086498-55086743) | |
| 546-708, gnl|rheMac2|chr7 (44955292-44955613) | |
| 546-708, gnl|rheMac2|chrX (128113098-128113280) | |
| 546-708, gnl|rn3|chr4 (186567977-186568122) | |
| 546-708, gnl|rn3|chr4 (186567659-186568139) | |
| 546-708, gnl|rn3|chr4 (186567966-186568139) | |
| 546-708, gnl|rn3|chr4 (186568139-186567832) | |
| 546-708, gnl|rn3|chr4 (186568139-186567965) | |
| 546-708, gnl|rn3|chr4 (186567931-186568139) | |
| 546-708, gnl|rn3|chr4 (186567892-186568138) |
| Aligned organism(s): 81 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 3-519, gnl|bosTau2|chr13 (58371154-58371670) | |
| 3-519, gnl|Hg17|chr20 (49833056-49832524) | |
| 546-708, gnl|bosTau2|chr13 (58371678-58371836) | |
| 546-708, gnl|canFam2|chr21 (30306699-30306548) | |
| 546-708, gnl|canFam2|chr24 (40921495-40921379) | |
| 546-708, gnl|canFam2|chr24 (40921802-40921345) | |
| 546-708, gnl|canFam2|chr24 (40921345-40921498) | |
| 546-708, gnl|canFam2|chr24 (40921531-40921345) | |
| 546-708, gnl|canFam2|chr24 (40921571-40921346) | |
| 546-708, gnl|canFam2|chr36 (17190292-17189996) | |
| 546-708, gnl|dasNov1|scaffold_84950 (6371-6493) | |
| 546-708, gnl|dasNov1|scaffold_84950 (6056-6525) | |
| 546-708, gnl|dasNov1|scaffold_84950 (6370-6525) | |
| 546-708, gnl|dasNov1|scaffold_84950 (6525-6204) | |
| 546-708, gnl|dasNov1|scaffold_84950 (6525-6369) | |
| 546-708, gnl|dasNov1|scaffold_84950 (6335-6525) | |
| 546-708, gnl|dasNov1|scaffold_84950 (6288-6524) | |
| 546-708, gnl|echTel1|scaffold_277629 (55227-55345) | |
| 546-708, gnl|echTel1|scaffold_277629 (54903-55378) | |
| 546-708, gnl|echTel1|scaffold_277629 (55219-55378) | |
| 546-708, gnl|echTel1|scaffold_277629 (55378-55047) | |
| 546-708, gnl|echTel1|scaffold_277629 (55378-55227) | |
| 546-708, gnl|echTel1|scaffold_277629 (55173-55378) | |
| 546-708, gnl|echTel1|scaffold_277629 (55122-55377) | |
| 546-708, gnl|hg17|chr12 (67425578-67425761) | |
| 546-708, gnl|hg17|chr15 (64505086-64505406) | |
| 546-708, gnl|hg17|chr16 (20079596-20079723) | |
| 546-708, gnl|hg17|chr20 (49832360-49832529) | |
| 546-708, gnl|Hg17|chr20 (49832516-49832360) | |
| 546-708, gnl|hg17|chr3 (42340576-42341058) | |
| 546-708, gnl|hg17|chr5 (56757236-56757485) | |
| 546-708, gnl|hg17|chrX (128740929-128741108) | |
| 546-708, gnl|loxAfr1|scaffold_15490 (54472-54363) | |
| 546-708, gnl|loxAfr1|scaffold_15490 (54804-54331) | |
| 546-708, gnl|loxAfr1|scaffold_15490 (54479-54331) | |
| 546-708, gnl|loxAfr1|scaffold_15490 (54331-54658) | |
| 546-708, gnl|loxAfr1|scaffold_15490 (54331-54473) | |
| 546-708, gnl|loxAfr1|scaffold_15490 (54517-54331) | |
| 546-708, gnl|loxAfr1|scaffold_15490 (54575-54332) | |
| 546-708, gnl|mm7|chr2 (168541220-168541072) | |
| 546-708, gnl|mm7|chr2 (168541573-168541055) | |
| 546-708, gnl|mm7|chr2 (168541055-168541240) | |
| 546-708, gnl|mm7|chr2 (168541274-168541055) | |
| 546-708, gnl|mm7|chr2 (168541328-168541059) | |
| 546-708, gnl|Mm7|chr2 (168541212-168541055) | |
| 546-708, gnl|mm7|chr6 (148689034-148689203) | |
| 546-708, gnl|monDom2|scaffold_1 (164001271-164001143) | |
| 546-708, gnl|monDom2|scaffold_1 (164001594-164001114) | |
| 546-708, gnl|monDom2|scaffold_1 (164001307-164001114) | |
| 546-708, gnl|monDom2|scaffold_1 (164001114-164001452) | |
| 546-708, gnl|monDom2|scaffold_1 (164001114-164001275) | |
| 546-708, gnl|monDom2|scaffold_1 (164001300-164001114) | |
| 546-708, gnl|monDom2|scaffold_1 (164001354-164001115) | |
| 546-708, gnl|oryCun1|scaffold_103451 (4160-4056) | |
| 546-708, gnl|oryCun1|scaffold_103451 (4448-4024) | |
| 546-708, gnl|oryCun1|scaffold_103451 (4164-4024) | |
| 546-708, gnl|oryCun1|scaffold_103451 (4024-4300) | |
| 546-708, gnl|oryCun1|scaffold_103451 (4024-4165) | |
| 546-708, gnl|oryCun1|scaffold_103451 (4199-4024) | |
| 546-708, gnl|oryCun1|scaffold_103451 (4233-4025) | |
| 546-708, gnl|panTro1|chr10 (68955279-68955462) | |
| 546-708, gnl|panTro1|chr16 (65012301-65012621) | |
| 546-708, gnl|panTro1|chr18 (20546697-20546828) | |
| 546-708, gnl|panTro1|chr21 (52598113-52598280) | |
| 546-708, gnl|panTro1|chr2_random (36414302-36413822) | |
| 546-708, gnl|panTro1|chr4 (59452114-59451865) | |
| 546-708, gnl|panTro1|chrX (132975125-132975304) | |
| 546-708, gnl|rheMac2|chr10 (12681887-12681718) | |
| 546-708, gnl|rheMac2|chr11 (65741831-65742023) | |
| 546-708, gnl|rheMac2|chr2 (94269121-94268631) | |
| 546-708, gnl|rheMac2|chr20 (19158051-19158183) | |
| 546-708, gnl|rheMac2|chr6 (55086498-55086743) | |
| 546-708, gnl|rheMac2|chr7 (44955292-44955613) | |
| 546-708, gnl|rheMac2|chrX (128113098-128113280) | |
| 546-708, gnl|rn3|chr4 (186567977-186568122) | |
| 546-708, gnl|rn3|chr4 (186567659-186568139) | |
| 546-708, gnl|rn3|chr4 (186567966-186568139) | |
| 546-708, gnl|rn3|chr4 (186568139-186567832) | |
| 546-708, gnl|rn3|chr4 (186568139-186567965) | |
| 546-708, gnl|rn3|chr4 (186567931-186568139) | |
| 546-708, gnl|rn3|chr4 (186567892-186568138) |