Ss1.1-Pig4-TMW8044F04.3
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| ACGCCAAGACCAACCGCAACGACAACTCAAGCAGGTTCGGGAAATACATGGATATCAACT TCGATTTCAAGGGGGACCCCATTGGCGGACATATCAATAACTACCTCCTGGAAAAGTCTC GAGTGATTGTGCAACAGCCAGGAGAAAGAAGCTTTCACTCTTTCTATCAGCTACTCCAAG GAGGTTCAGAGCAGATGCTACATTCTCTGCATCTCCAGAAATCCCTTTCATCCTATAACT ATATCCACGTTGGAGCCCAACTAAAGTCGTCTATCAATGATGCTGCGGAGTTCAAAGTGG TAGCTGATGCCATGAAAGTAATTGGCTTCAAACCTGAGGAGATTCAAACAGTGTATAAAA TTTTGGCTGCTATTCTTCACTTGGGGAATTTAAAGTTTGTCGTGGACGGTGACACGCCTC TGATCGAAAACGGCAAGGTGGTGTCTATCATCGCGGACCTGCTGTCCACCAAGCCGGACA TGGTCGAGAAAGCCCTCCTTTACCGGACGGTGGCCACGGGTCGGGATGTTATCGACAAGC AGCACACGGAGCAAGAAGCTAGCTACGGCAGAGACGCCTTCGCCAAGGCCATATACGAGC GCCTTTTCTGTTGGATCGTTTCTCGCATCAACGATATCATTGAGGTCAAGAGGTCTGACG CCACCATCCACGGGAAGAACACGGTCATCGGCGTCCTGGATATCTACGGCTTTGAGATCT TTGACAACAACAGCTTTGAACAGTTCTGCATCAATTACTGCAACGAGAAGCTGCAGCAGC TCTTTATCCAGCTGGTCCTGAAGCAAGAACAGGAGGAGTACCAGCGGGAGGGCATCCCCT GGAAGCACGTGAGTGGACTCTTGCAGGCTGTGGATGCTCACGTCCAGCCTTCGCATCTTG GGCATCTTCTCATCTCCTTGGGTGTTGGAAACACCTAAGCCTTAGCTTTCCTTTGTGGGG GATGTAAAGGCAGTTCATTTGCAGGCTTGACAGTTG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| ACGCCAAGACCAACCGCAACGACAACTCAAGCAGGTTCGGGAAATACATGGATATCAACT TCGATTTCAAGGGGGACCCCATTGGCGGACATATCAATAACTACCTCCTGGAAAAGTCTC GAGTGATTGTGCAACAGCCAGGAGAAAGAAGCTTTCACTCTTTCTATCAGCTACTCCAAG GAGGTTCAGAGCAGATGCTACATTCTCTGCATCTCCAGAAATCCCTTTCATCCTATAACT ATATCCACGTTGGAGCCCAACTAAAGTCGTCTATCAATGATGCTGCGGAGTTCAAAGTGG TAGCTGATGCCATGAAAGTAATTGGCTTCAAACCTGAGGAGATTCAAACAGTGTATAAAA TTTTGGCTGCTATTCTTCACTTGGGGAATTTAAAGTTTGTCGTGGACGGTGACACGCCTC TGATCGAAAACGGCAAGGTGGTGTCTATCATCGCGGACCTGCTGTCCACCAAGCCGGACA TGGTCGAGAAAGCCCTCCTTTACCGGACGGTGGCCACGGGTCGGGATGTTATCGACAAGC AGCACACGGAGCAAGAAGCTAGCTACGGCAGAGACGCCTTCGCCAAGGCCATATACGAGC GCCTTTTCTGTTGGATCGTTTCTCGCATCAACGATATCATTGAGGTCAAGAGGTCTGACG CCACCATCCACGGGAAGAACACGGTCATCGGCGTCCTGGATATCTACGGCTTTGAGATCT TTGACAACAACAGCTTTGAACAGTTCTGCATCAATTACTGCAACGAGAAGCTGCAGCAGC TCTTTATCCAGCTGGTCCTGAAGCAAGAACAGGAGGAGTACCAGCGGGAGGGCATCCCCT GGAAGCACGTGAGTGGACTCTTGCAGGCTGTGGATGCTCACGTCCAGCCTTCGCATCTTG GGCATCTTCTCATCTCCTTGGGTGTTGGAAACACCTAAGCCTTAGCTTTCCTTTGTGGGG GATGTAAAGGCAGTTCATTTGCAGGCTTGACAGTTG |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 731-908, + strand, RNAz p=0.995279 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 731-908, + strand, RNAz p=0.995279 |
| Aligned organism(s): 37 entry(ies) | More info |
| Aligned organism(s): 37 entry(ies) | Help | Less info |
| 3-116, gnl|bosTau2|chr19 (12118182-12118295) | |
| 3-116, gnl|canFam2|chr9 (43586157-43585967) | |
| 3-116, gnl|danRer3|chrUn (88753645-88753819) | |
| 3-116, gnl|dasNov1|scaffold_124399 (6656-6466) | |
| 3-116, gnl|echTel1|scaffold_181198 (4097-4288) | |
| 3-116, gnl|fr1|chrUn (308758397-308758226) | |
| 3-116, gnl|galGal2|chr27 (1489177-1489365) | |
| 3-116, gnl|hg17|chr17 (28126992-28127182) | |
| 3-116, gnl|Hg17|chr17 (28127108-28126995) | |
| 3-116, gnl|loxAfr1|scaffold_43351 (33444-33616) | |
| 3-116, gnl|mm7|chr11 (80765897-80766087) | |
| 3-116, gnl|Mm7|chr11 (80766013-80765900) | |
| 3-116, gnl|monDom2|scaffold_44 (11048635-11048445) | |
| 3-116, gnl|oryCun1|scaffold_211008 (4401-4591) | |
| 3-116, gnl|panTro1|chr19 (31645617-31645808) | |
| 3-116, gnl|rheMac2|chr16 (28102145-28102335) | |
| 3-116, gnl|rn3|chr10 (68925147-68925335) | |
| 3-116, gnl|tetNig1|chr2 (1313544-1313715) | |
| 3-116, gnl|xenTro1|scaffold_221 (1041465-1041657) | |
| 383-588, gnl|bosTau2|chr19 (12127729-12127934) | |
| 383-588, gnl|canFam2|chr9 (43594643-43594508) | |
| 383-588, gnl|danRer3|chrUn (88747202-88747335) | |
| 383-588, gnl|echTel1|scaffold_286654 (46967-47102) | |
| 383-588, gnl|fr1|chrUn (308759482-308759350) | |
| 383-588, gnl|galGal2|chr27 (1486824-1486959) | |
| 383-588, gnl|hg17|chr17 (28116006-28116141) | |
| 383-588, gnl|Hg17|chr17 (28116213-28116008) | |
| 383-588, gnl|mm7|chr11 (80757623-80757758) | |
| 383-588, gnl|Mm7|chr11 (80757830-80757625) | |
| 383-588, gnl|monDom2|scaffold_44 (11056439-11056304) | |
| 383-588, gnl|panTro1|chr19 (31634589-31634724) | |
| 383-588, gnl|rheMac2|chr16 (28091427-28091562) | |
| 383-588, gnl|rn3|chr10 (68917811-68917946) | |
| 383-588, gnl|tetNig1|chr2 (1312359-1312494) | |
| 383-588, gnl|xenTro1|scaffold_221 (1038367-1038502) | |
| 731-965, gnl|bosTau2|chr19 (12130114-12130334) | |
| 731-965, gnl|Hg17|chr17 (28111538-28111291) |
| Aligned organism(s): 37 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 3-116, gnl|bosTau2|chr19 (12118182-12118295) | |
| 3-116, gnl|canFam2|chr9 (43586157-43585967) | |
| 3-116, gnl|danRer3|chrUn (88753645-88753819) | |
| 3-116, gnl|dasNov1|scaffold_124399 (6656-6466) | |
| 3-116, gnl|echTel1|scaffold_181198 (4097-4288) | |
| 3-116, gnl|fr1|chrUn (308758397-308758226) | |
| 3-116, gnl|galGal2|chr27 (1489177-1489365) | |
| 3-116, gnl|hg17|chr17 (28126992-28127182) | |
| 3-116, gnl|Hg17|chr17 (28127108-28126995) | |
| 3-116, gnl|loxAfr1|scaffold_43351 (33444-33616) | |
| 3-116, gnl|mm7|chr11 (80765897-80766087) | |
| 3-116, gnl|Mm7|chr11 (80766013-80765900) | |
| 3-116, gnl|monDom2|scaffold_44 (11048635-11048445) | |
| 3-116, gnl|oryCun1|scaffold_211008 (4401-4591) | |
| 3-116, gnl|panTro1|chr19 (31645617-31645808) | |
| 3-116, gnl|rheMac2|chr16 (28102145-28102335) | |
| 3-116, gnl|rn3|chr10 (68925147-68925335) | |
| 3-116, gnl|tetNig1|chr2 (1313544-1313715) | |
| 3-116, gnl|xenTro1|scaffold_221 (1041465-1041657) | |
| 383-588, gnl|bosTau2|chr19 (12127729-12127934) | |
| 383-588, gnl|canFam2|chr9 (43594643-43594508) | |
| 383-588, gnl|danRer3|chrUn (88747202-88747335) | |
| 383-588, gnl|echTel1|scaffold_286654 (46967-47102) | |
| 383-588, gnl|fr1|chrUn (308759482-308759350) | |
| 383-588, gnl|galGal2|chr27 (1486824-1486959) | |
| 383-588, gnl|hg17|chr17 (28116006-28116141) | |
| 383-588, gnl|Hg17|chr17 (28116213-28116008) | |
| 383-588, gnl|mm7|chr11 (80757623-80757758) | |
| 383-588, gnl|Mm7|chr11 (80757830-80757625) | |
| 383-588, gnl|monDom2|scaffold_44 (11056439-11056304) | |
| 383-588, gnl|panTro1|chr19 (31634589-31634724) | |
| 383-588, gnl|rheMac2|chr16 (28091427-28091562) | |
| 383-588, gnl|rn3|chr10 (68917811-68917946) | |
| 383-588, gnl|tetNig1|chr2 (1312359-1312494) | |
| 383-588, gnl|xenTro1|scaffold_221 (1038367-1038502) | |
| 731-965, gnl|bosTau2|chr19 (12130114-12130334) | |
| 731-965, gnl|Hg17|chr17 (28111538-28111291) |