Ss1.1-Pig4-TMW8044I15.3
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GCAGGCGTGGAGGGCGGGAGCGCTGCAAACTCGCAGGTGTGGGGAGCGGTTCGGTGCAGC GAAGCAAGCGGGGCATGACCCCGCCTTCTGCTTCTTCTCTTTCAAGTGGCGGGAACTGTC GGCCAGCCGTCCGGGTCCCAGCCCGCAGGTCTTGTCCTCCGGTCTCCGAGTAGATAATAT GTATCATCAGTAGAAAAGCTTCTTGAAGAAATTGTTCAAAAGAAACTTGAAAGGAGCAAA AGTATAAGACAGAATTGACAGCAGATGCAGAGGACAGCATGGCAATTTTACTTCATTCAT TCATTTAATAAATTCATGCAGAAGAACTTTGTTTAACACCTATTCTTGCCGAGTATTGTC CTGAGCAACGGAACACAGCAGTGAACAAATAAACAAAATCTCCCGCTGATATGCAGCTAC AGCTGATGATGTCTTCCAGTTTCAGTGTATTTAGAGTTGGCATCTCTTTTGTCATGATGT GCATTTTTTATATGTTAGCAGTAGACTCTCTACCAGAACTGAGTCCTCAGAAATTCTTTA GTACATTGCAACCAGGAAAAGCCACCTTAGCTTATTTCTGTCAAGCTGATTCTCCAAGTA CCTCTGTATTTCTTGAAGAACTGAATGAGGCTGTTAAACCTCTCCAGGACTATGGAATTT CAGTTGCAAAGGTTAATTGTGTCGCAGAAGAAACCTCAAGATACTGTGGAAGAGAAGAGG ATTTGATGAAAGTGTATTTATTCAGGGGCAGCATATTACTCAGAGAATTCCCCACGGATA CCTTGTTCGATGTAAATGCCATCGTGGCTCATGTTCTCTTTGCTCTTCTTTTTAATGAAG TAAAATATATTACCACTCTGGGAGACCTTCAGAACATAGAAAATGCTCGGAAAGGAAGAA CAAACATTGTGTTCTCATATGTCAGAGCCATTGGAACACCAGAGCACAGAGCAGTCATGG AAGCTGCTTTTGTGTATGGGACCACGTACCAATTTGTCTTAACCACAGAAATTTCCCTTT TGGAAAGTATTGGCACTGAAGATATAGAATATGCACATCTCTACTTTTTTCATTGTAAAC CAGTCTTGGACTTGACTCAGCAATGTAAGAGAACACTAATGGAACAGTCATTGACTACAC TGAACATCCATCAATTTATTAAAACAATGGAAGCAC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GCAGGCGTGGAGGGCGGGAGCGCTGCAAACTCGCAGGTGTGGGGAGCGGTTCGGTGCAGC GAAGCAAGCGGGGCATGACCCCGCCTTCTGCTTCTTCTCTTTCAAGTGGCGGGAACTGTC GGCCAGCCGTCCGGGTCCCAGCCCGCAGGTCTTGTCCTCCGGTCTCCGAGTAGATAATAT GTATCATCAGTAGAAAAGCTTCTTGAAGAAATTGTTCAAAAGAAACTTGAAAGGAGCAAA AGTATAAGACAGAATTGACAGCAGATGCAGAGGACAGCATGGCAATTTTACTTCATTCAT TCATTTAATAAATTCATGCAGAAGAACTTTGTTTAACACCTATTCTTGCCGAGTATTGTC CTGAGCAACGGAACACAGCAGTGAACAAATAAACAAAATCTCCCGCTGATATGCAGCTAC AGCTGATGATGTCTTCCAGTTTCAGTGTATTTAGAGTTGGCATCTCTTTTGTCATGATGT GCATTTTTTATATGTTAGCAGTAGACTCTCTACCAGAACTGAGTCCTCAGAAATTCTTTA GTACATTGCAACCAGGAAAAGCCACCTTAGCTTATTTCTGTCAAGCTGATTCTCCAAGTA CCTCTGTATTTCTTGAAGAACTGAATGAGGCTGTTAAACCTCTCCAGGACTATGGAATTT CAGTTGCAAAGGTTAATTGTGTCGCAGAAGAAACCTCAAGATACTGTGGAAGAGAAGAGG ATTTGATGAAAGTGTATTTATTCAGGGGCAGCATATTACTCAGAGAATTCCCCACGGATA CCTTGTTCGATGTAAATGCCATCGTGGCTCATGTTCTCTTTGCTCTTCTTTTTAATGAAG TAAAATATATTACCACTCTGGGAGACCTTCAGAACATAGAAAATGCTCGGAAAGGAAGAA CAAACATTGTGTTCTCATATGTCAGAGCCATTGGAACACCAGAGCACAGAGCAGTCATGG AAGCTGCTTTTGTGTATGGGACCACGTACCAATTTGTCTTAACCACAGAAATTTCCCTTT TGGAAAGTATTGGCACTGAAGATATAGAATATGCACATCTCTACTTTTTTCATTGTAAAC CAGTCTTGGACTTGACTCAGCAATGTAAGAGAACACTAATGGAACAGTCATTGACTACAC TGAACATCCATCAATTTATTAAAACAATGGAAGCAC |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 821-942, - strand, RNAz p=0.882184 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 821-942, - strand, RNAz p=0.882184 |
| Aligned organism(s): 26 entry(ies) | More info |
| Aligned organism(s): 26 entry(ies) | Help | Less info |
| 821-942, gnl|bosTau2|chr10 (8060750-8060871) | |
| 821-942, gnl|canFam2|chr8 (31745956-31746200) | |
| 821-942, gnl|dasNov1|scaffold_140818 (1173-1444) | |
| 821-942, gnl|hg17|chr14 (52055521-52055808) | |
| 821-942, gnl|Hg17|chr14 (52055761-52055640) | |
| 821-942, gnl|loxAfr1|scaffold_21776 (4395-4721) | |
| 821-942, gnl|mm7|chr14 (40501201-40501431) | |
| 821-942, gnl|Mm7|chr14 (40501401-40501280) | |
| 821-942, gnl|monDom2|scaffold_6 (100909181-100909492) | |
| 821-942, gnl|oryCun1|scaffold_203708 (52614-52324) | |
| 821-942, gnl|panTro1|chr15 (51507640-51507926) | |
| 821-942, gnl|rheMac2|chr7 (115485603-115485889) | |
| 821-942, gnl|rn3|chr15 (21066111-21066343) | |
| 1033-1176, gnl|bosTau2|chr10 (8070624-8070767) | |
| 1033-1176, gnl|canFam2|chr8 (31738196-31738806) | |
| 1033-1176, gnl|dasNov1|scaffold_7930 (832-173) | |
| 1033-1176, gnl|echTel1|scaffold_104757 (4598-5324) | |
| 1033-1176, gnl|hg17|chr14 (52047695-52048340) | |
| 1033-1176, gnl|Hg17|chr14 (52047859-52047716) | |
| 1033-1176, gnl|mm7|chr14 (40487457-40488023) | |
| 1033-1176, gnl|Mm7|chr14 (40487622-40487479) | |
| 1033-1176, gnl|monDom2|scaffold_6 (100890817-100891515) | |
| 1033-1176, gnl|oryCun1|scaffold_203708 (66334-65717) | |
| 1033-1176, gnl|panTro1|chr15 (51499689-51500335) | |
| 1033-1176, gnl|rheMac2|chr7 (115477954-115478596) | |
| 1033-1176, gnl|rn3|chr15 (21056580-21057157) |
| Aligned organism(s): 26 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 821-942, gnl|bosTau2|chr10 (8060750-8060871) | |
| 821-942, gnl|canFam2|chr8 (31745956-31746200) | |
| 821-942, gnl|dasNov1|scaffold_140818 (1173-1444) | |
| 821-942, gnl|hg17|chr14 (52055521-52055808) | |
| 821-942, gnl|Hg17|chr14 (52055761-52055640) | |
| 821-942, gnl|loxAfr1|scaffold_21776 (4395-4721) | |
| 821-942, gnl|mm7|chr14 (40501201-40501431) | |
| 821-942, gnl|Mm7|chr14 (40501401-40501280) | |
| 821-942, gnl|monDom2|scaffold_6 (100909181-100909492) | |
| 821-942, gnl|oryCun1|scaffold_203708 (52614-52324) | |
| 821-942, gnl|panTro1|chr15 (51507640-51507926) | |
| 821-942, gnl|rheMac2|chr7 (115485603-115485889) | |
| 821-942, gnl|rn3|chr15 (21066111-21066343) | |
| 1033-1176, gnl|bosTau2|chr10 (8070624-8070767) | |
| 1033-1176, gnl|canFam2|chr8 (31738196-31738806) | |
| 1033-1176, gnl|dasNov1|scaffold_7930 (832-173) | |
| 1033-1176, gnl|echTel1|scaffold_104757 (4598-5324) | |
| 1033-1176, gnl|hg17|chr14 (52047695-52048340) | |
| 1033-1176, gnl|Hg17|chr14 (52047859-52047716) | |
| 1033-1176, gnl|mm7|chr14 (40487457-40488023) | |
| 1033-1176, gnl|Mm7|chr14 (40487622-40487479) | |
| 1033-1176, gnl|monDom2|scaffold_6 (100890817-100891515) | |
| 1033-1176, gnl|oryCun1|scaffold_203708 (66334-65717) | |
| 1033-1176, gnl|panTro1|chr15 (51499689-51500335) | |
| 1033-1176, gnl|rheMac2|chr7 (115477954-115478596) | |
| 1033-1176, gnl|rn3|chr15 (21056580-21057157) |