Ss1.1-Pig4-TMW8044M07.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| AAGTCCCGGGGGAGGATGGAGCACTGAGCGGGTCTGGGCGGCTGCCGGCAGCGCCATGGA GACGGTGCAGCTGAGGAACCCGCCGCGCCGGCAGCTGAAAAAGTTGGATGAGGATAGTTT AACTAAACAACCAGAAGAAGTGTTTGATGTCTTGGAGAAACTTGGAGAAGGGTCCTATGG CAGCGTGTACAAAGCTATTCATAAAGAGACCGGTCAGATTGTTGCTATTAAGCAAGTTCC TGTGGAATCGGACCTGCAGGAAATAATCAAAGAAATCTCTATAATGCAGCAATGTGACAG CCCTCACGTAGTCAAATATTATGGCAGTTATTTTAAGAACACAGACTTGTGGATTGTGAT GGAGTACTGTGGGGCTGGTTCTGTGTTCGATATCATTCGATTACGAAATAAAACGTTAAC AGAAGATGAAATAGCTACAATATTACAATCAACACTTAAGGGACTGGAATACCTTCATTT TATGAGAAAAATACATCGAGATATCAAGGCAGGAAATATTTTGCTAAATACAGAAGGACA TGCAAAACTTGCAGATTTTGGGGTAGCAGGTCAACTTACAGATACCATGGCCAAGAGAAA TACAGTGATAGGGACACCATTTTGGATGGCTCCAGAAGTGATTCAGGAAATAGGGTACAA CTGTGTGGCAGACATCTGGTCACTGGGAATCACTGCCATAGAAATGGCCGAAGGAAAGCC GCCGTATGCCGATATCCATCCAATGAGGGCAATCTTCATGATTCCTACCAACCCACCTCC CACATTCCGAAAGCCAGAACTGTGGTCAGATAGCTTCATGGATTTTGTGAAGCAGTGTCT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| AAGTCCCGGGGGAGGATGGAGCACTGAGCGGGTCTGGGCGGCTGCCGGCAGCGCCATGGA GACGGTGCAGCTGAGGAACCCGCCGCGCCGGCAGCTGAAAAAGTTGGATGAGGATAGTTT AACTAAACAACCAGAAGAAGTGTTTGATGTCTTGGAGAAACTTGGAGAAGGGTCCTATGG CAGCGTGTACAAAGCTATTCATAAAGAGACCGGTCAGATTGTTGCTATTAAGCAAGTTCC TGTGGAATCGGACCTGCAGGAAATAATCAAAGAAATCTCTATAATGCAGCAATGTGACAG CCCTCACGTAGTCAAATATTATGGCAGTTATTTTAAGAACACAGACTTGTGGATTGTGAT GGAGTACTGTGGGGCTGGTTCTGTGTTCGATATCATTCGATTACGAAATAAAACGTTAAC AGAAGATGAAATAGCTACAATATTACAATCAACACTTAAGGGACTGGAATACCTTCATTT TATGAGAAAAATACATCGAGATATCAAGGCAGGAAATATTTTGCTAAATACAGAAGGACA TGCAAAACTTGCAGATTTTGGGGTAGCAGGTCAACTTACAGATACCATGGCCAAGAGAAA TACAGTGATAGGGACACCATTTTGGATGGCTCCAGAAGTGATTCAGGAAATAGGGTACAA CTGTGTGGCAGACATCTGGTCACTGGGAATCACTGCCATAGAAATGGCCGAAGGAAAGCC GCCGTATGCCGATATCCATCCAATGAGGGCAATCTTCATGATTCCTACCAACCCACCTCC CACATTCCGAAAGCCAGAACTGTGGTCAGATAGCTTCATGGATTTTGTGAAGCAGTGTCT |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 183-300, - strand, RNAz p=0.940711 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 183-300, - strand, RNAz p=0.940711 |
| Aligned organism(s): 22 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
| 171-300, gnl|bosTau2|chr13 (55788184-55788055) | |
| 171-300, gnl|canFam2|chr24 (35363531-35363665) | |
| 171-300, gnl|danRer3|chr19 (48452463-48452597) | |
| 171-300, gnl|dasNov1|scaffold_24769 (56628-56762) | |
| 171-300, gnl|echTel1|scaffold_138108 (629-763) | |
| 171-300, gnl|fr1|chrUn (118544939-118544805) | |
| 171-300, gnl|galGal2|chr20 (4956947-4956813) | |
| 171-300, gnl|hg17|chr20 (43040497-43040631) | |
| 171-300, gnl|Hg17|chr20 (43040497-43040626) | |
| 171-300, gnl|loxAfr1|scaffold_5364 (120105-119969) | |
| 171-300, gnl|mm7|chr2 (163824519-163824653) | |
| 171-300, gnl|Mm7|chr2 (163824519-163824648) | |
| 171-300, gnl|monDom2|scaffold_1 (156759258-156759124) | |
| 171-300, gnl|oryCun1|scaffold_181806 (41690-41824) | |
| 171-300, gnl|panTro1|chr21 (45523569-45523703) | |
| 171-300, gnl|rheMac2|chr10 (19453132-19452998) | |
| 171-300, gnl|rn3|chr3 (154931181-154931315) | |
| 171-300, gnl|tetNig1|chr11 (11046890-11047024) | |
| 171-300, gnl|xenTro1|scaffold_329 (1028466-1028600) | |
| 336-772, gnl|bosTau2|chr12 (42346684-42347114) | |
| 336-772, gnl|Hg17|chrX (135107941-135103956) | |
| 336-772, gnl|Mm7|chr14 (115707246-115701607) |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 171-300, gnl|bosTau2|chr13 (55788184-55788055) | |
| 171-300, gnl|canFam2|chr24 (35363531-35363665) | |
| 171-300, gnl|danRer3|chr19 (48452463-48452597) | |
| 171-300, gnl|dasNov1|scaffold_24769 (56628-56762) | |
| 171-300, gnl|echTel1|scaffold_138108 (629-763) | |
| 171-300, gnl|fr1|chrUn (118544939-118544805) | |
| 171-300, gnl|galGal2|chr20 (4956947-4956813) | |
| 171-300, gnl|hg17|chr20 (43040497-43040631) | |
| 171-300, gnl|Hg17|chr20 (43040497-43040626) | |
| 171-300, gnl|loxAfr1|scaffold_5364 (120105-119969) | |
| 171-300, gnl|mm7|chr2 (163824519-163824653) | |
| 171-300, gnl|Mm7|chr2 (163824519-163824648) | |
| 171-300, gnl|monDom2|scaffold_1 (156759258-156759124) | |
| 171-300, gnl|oryCun1|scaffold_181806 (41690-41824) | |
| 171-300, gnl|panTro1|chr21 (45523569-45523703) | |
| 171-300, gnl|rheMac2|chr10 (19453132-19452998) | |
| 171-300, gnl|rn3|chr3 (154931181-154931315) | |
| 171-300, gnl|tetNig1|chr11 (11046890-11047024) | |
| 171-300, gnl|xenTro1|scaffold_329 (1028466-1028600) | |
| 336-772, gnl|bosTau2|chr12 (42346684-42347114) | |
| 336-772, gnl|Hg17|chrX (135107941-135103956) | |
| 336-772, gnl|Mm7|chr14 (115707246-115701607) |