Non-Coding RNA Search

Ss1.1-Pig4-TMW8044M22.3

Sequence:


               
               TGTAGTTGTGCACAACTACAGAAATGCCTTCAGTGCCACATAGGAAAAACAAAAATACAC
CAGCAACCGAAGAAAGAGTTTTGAGGCCACGTTTATTTGTAGAAAACATTTGTGTTAAAA
CACACACACACACACACACACACACACACATTCACTCACAAGTCAGTGAAGCTCAAGAGT
TGATTATTTTAATATTCTTCAAGATAGCATATTTGATTGTAGTGGCATCAGTAAACATTA
GTCTCAGAATTTTCGCTAAAACTGTGCTCTTCAGATTCCTTGTTTAAGCCTAAGATTCTG
GAATATTGGGCTTTGGTCTTGAAAATGATGTCTTTCCCAAGATAAATCTCGAGTTCAGAG
GAAACACCATTTGAGATGTGATATGGAAGAATGAAGAATCTTCACATACTTATCCAATAG
GCTCTCATAATGGTATTTTTTTTGTCCCATATTTGGCTATGATTTGGCTAAATGCTCTGT
GGAGCTTTGCATTATTTCATAAATTTACATGTTTATTCTGAGTAGCTTATATTATTCTTT
TCAATCTAGGGGAGCCAAAATATTATTATACACACATATATAATAAATGTATTTATAAAA
TATGTTTTTCTTTTGAATTTAGACATTTAAGCTGATTTTTTTTCCCTATTTCCTTTTTCA
GCCTCACCTGCAGCATATGGAAGTTCCTGGACCAGGGATTGAACTGGGAACACCACAGAG
ACAAGCCAGATAGTTAACCCACTGCATCACAGCAGGAACTCTTAAGCTGATTTTTTCCTA
ATTTTCGATATAAAAATTCTGTATGAGAAAGACTTAAAGTCAACATGCTTGACACTTTTT
TACATCTTTTATATCTTATTCATTGATTATGTCAGGTCCTCTCATTACAGTTTTCACACA
AGCTGCAAGTTGATTTTAATGGTACTTTTCTAAATTTTTGAGTCATTGGCATGTTTTGTT
TTTTCTTCTCAGTACAGATATGACTTTTCATTAGAATGGAGAGATTGGCTGTGTCCCCGT
TCACACTTAGTGGCAATTTCCTGCTCAGAGATCTTGGCATAATATATTTTATTTCAGCTA
ATTACAGAGGTGGAAAGAAAATCCACATTATGAATGAAAGTGTGAAGATACAGTTTTAAA
TGACCAGCAATCTAATCCTGCCTTAATAGTCCATCTTTTCAATAAAGTTTTTCACTATCA
TAATTTTGAATACTATAGTAAGATATATGAGTCAAGAATTGCATTTAGAAAGAAAATTAT
TGAAAGGAAATCTATTTGAATAATCCTATAGTGATTCATAATGTATATACATATAGAATT
TCATTTCATTTCAATGGGCAAAAATAGAAAACTATTTCTTTCTTAAATGTGAGCTTTAAA
ATTTCCTTGTACTGTGTTTCCACTGCCATTTCTAAGTTCGCAAAAAATAAAAGCATTATT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TGTAGTTGTGCACAACTACAGAAATGCCTTCAGTGCCACATAGGAAAAACAAAAATACAC
CAGCAACCGAAGAAAGAGTTTTGAGGCCACGTTTATTTGTAGAAAACATTTGTGTTAAAA
CACACACACACACACACACACACACACACATTCACTCACAAGTCAGTGAAGCTCAAGAGT
TGATTATTTTAATATTCTTCAAGATAGCATATTTGATTGTAGTGGCATCAGTAAACATTA
GTCTCAGAATTTTCGCTAAAACTGTGCTCTTCAGATTCCTTGTTTAAGCCTAAGATTCTG
GAATATTGGGCTTTGGTCTTGAAAATGATGTCTTTCCCAAGATAAATCTCGAGTTCAGAG
GAAACACCATTTGAGATGTGATATGGAAGAATGAAGAATCTTCACATACTTATCCAATAG
GCTCTCATAATGGTATTTTTTTTGTCCCATATTTGGCTATGATTTGGCTAAATGCTCTGT
GGAGCTTTGCATTATTTCATAAATTTACATGTTTATTCTGAGTAGCTTATATTATTCTTT
TCAATCTAGGGGAGCCAAAATATTATTATACACACATATATAATAAATGTATTTATAAAA
TATGTTTTTCTTTTGAATTTAGACATTTAAGCTGATTTTTTTTCCCTATTTCCTTTTTCA
GCCTCACCTGCAGCATATGGAAGTTCCTGGACCAGGGATTGAACTGGGAACACCACAGAG
ACAAGCCAGATAGTTAACCCACTGCATCACAGCAGGAACTCTTAAGCTGATTTTTTCCTA
ATTTTCGATATAAAAATTCTGTATGAGAAAGACTTAAAGTCAACATGCTTGACACTTTTT
TACATCTTTTATATCTTATTCATTGATTATGTCAGGTCCTCTCATTACAGTTTTCACACA
AGCTGCAAGTTGATTTTAATGGTACTTTTCTAAATTTTTGAGTCATTGGCATGTTTTGTT
TTTTCTTCTCAGTACAGATATGACTTTTCATTAGAATGGAGAGATTGGCTGTGTCCCCGT
TCACACTTAGTGGCAATTTCCTGCTCAGAGATCTTGGCATAATATATTTTATTTCAGCTA
ATTACAGAGGTGGAAAGAAAATCCACATTATGAATGAAAGTGTGAAGATACAGTTTTAAA
TGACCAGCAATCTAATCCTGCCTTAATAGTCCATCTTTTCAATAAAGTTTTTCACTATCA
TAATTTTGAATACTATAGTAAGATATATGAGTCAAGAATTGCATTTAGAAAGAAAATTAT
TGAAAGGAAATCTATTTGAATAATCCTATAGTGATTCATAATGTATATACATATAGAATT
TCATTTCATTTCAATGGGCAAAAATAGAAAACTATTTCTTTCTTAAATGTGAGCTTTAAA
ATTTCCTTGTACTGTGTTTCCACTGCCATTTCTAAGTTCGCAAAAAATAAAAGCATTATT

Aligned organism(s): 5 entry(ies)

More info

Aligned organism(s): 5 entry(ies)

Help | Less info


               
               1-385, gnl|bosTau2|chr21 (5655132-5654744)
               

               
               1-385, gnl|Hg17|chr15 (94583738-94583357)
               


               
               757-1137, gnl|bosTau2|chr21 (5650548-5650178)
               

               
               757-1137, gnl|Hg17|chr15 (94583143-94582785)
               

               
               757-1137, gnl|Mm7|chr7 (66307179-66307489)

Aligned organism(s): 5 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-385, gnl|bosTau2|chr21 (5655132-5654744)
               

               
               1-385, gnl|Hg17|chr15 (94583738-94583357)
               


               
               757-1137, gnl|bosTau2|chr21 (5650548-5650178)
               

               
               757-1137, gnl|Hg17|chr15 (94583143-94582785)
               

               
               757-1137, gnl|Mm7|chr7 (66307179-66307489)

	1-385, gnl\|bosTau2\|chr21 (5655132-5654744)
	1-385, gnl\|Hg17\|chr15 (94583738-94583357)

	757-1137, gnl\|bosTau2\|chr21 (5650548-5650178)
	757-1137, gnl\|Hg17\|chr15 (94583143-94582785)
	757-1137, gnl\|Mm7\|chr7 (66307179-66307489)