Non-Coding RNA Search

Ss1.1-Pig4-TMW8045A16.3

Sequence:


               
               GGAAAGAATGTCGCATAACAGAAAATTTGAAAATTACCGATGACGCTTTTTGATATTAAT
TGATGATTGGTAGAGCTGGTTGAAAGTACAAGGTGAAAGCAAGCTGAGCTAGAAGTAGCA
CCAGTGACTATTTTCTATTCTGCTTTATTATTACTTCCTCTCTTTTTATTACTGTAAACC
AGTTTGAGTTGCAAAAGGATGAAGTTTTTAATGGTCAACAAATTCCTGTAGGGGAATTCT
TACTGATGTTTAGTTGCCATCTCTTCTAATGTTATAAAACTTCAGAATATTAAAATTGTT
CCAGGAGAATGGAGAAGGGACAAGTAACTTAATCTATTTGTTTTTATTTTTTCTTCTGTA
AAATGGGGATAGCAATTTTTAGCTCAAATTACTGTGTTCCAATCCTTTTGCATATGTTTT
------------------------------------------------------------
------------TATGTAACAGCCACAGCAACACAGGATCAGAGCTGCGTCTGCAACCTA
CATCACAGCTCATGGCAACATCGGATCCTTAACCCACTGAGCGAGGCCAGAGATAGAACC
CGCAACCTCATGGTTCCTAGTCAGATTTGTTTCTGCTGTGCCAAGATAGGAACTCCCTCT
TTGCATGTGTTTCTGCGTTAGTTTTGCCTTGACATATTGGTAGCTTTTGTTCTTTTCCTA
ACTTTAGCCTTTGTTTCCTTCTTTCGTGTCACTGTAAATATGAATGTTTCTTGAAAATTA
ATTTTTAGAATCTTTGGGGGTATGTTGATACTAAATAGTATAAAAACAAAATACCGTAAT
CCTCATGGTTTTTTAAAGTTATATAGCATTTATCTTTTAAAATAAAGTACACTTGAAAAT
TACCAATGACGCTTTTTGATATTAATTGATGATTGGTAGAGCTGGTTGAAAGTAATTTTC
AGTGTACTGTGCAATACCAAGTGTCCTAGAGAAGTTGTAAATATTAACAAATAAAGCATT
TTGCCAATATATGTTTTTTTAACATGAGTTGAATAACACAGGAAATGGTGTGCTTTTCAA
CTCTATTTAGAAAATTAGGAATTACTTGATTTCTCTTTTTAGGTGCTTAGTAGAAAAAAG
GGTTTCTGTAATTGTGCCGTATGTTATACAGTGTATTCACCAATACAGTGTCTTGCTTGG
GAGGGCTGTAGTCTTCAAAAAGGCATCCATACATTTCAAAATTTGTTGTTTTGTTATCTC
GAAGTCCTTGTTAATCTAAGGTTAAAAGTGACTGCTAGATAGAAAATC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGAAAGAATGTCGCATAACAGAAAATTTGAAAATTACCGATGACGCTTTTTGATATTAAT
TGATGATTGGTAGAGCTGGTTGAAAGTACAAGGTGAAAGCAAGCTGAGCTAGAAGTAGCA
CCAGTGACTATTTTCTATTCTGCTTTATTATTACTTCCTCTCTTTTTATTACTGTAAACC
AGTTTGAGTTGCAAAAGGATGAAGTTTTTAATGGTCAACAAATTCCTGTAGGGGAATTCT
TACTGATGTTTAGTTGCCATCTCTTCTAATGTTATAAAACTTCAGAATATTAAAATTGTT
CCAGGAGAATGGAGAAGGGACAAGTAACTTAATCTATTTGTTTTTATTTTTTCTTCTGTA
AAATGGGGATAGCAATTTTTAGCTCAAATTACTGTGTTCCAATCCTTTTGCATATGTTTT
------------------------------------------------------------
------------TATGTAACAGCCACAGCAACACAGGATCAGAGCTGCGTCTGCAACCTA
CATCACAGCTCATGGCAACATCGGATCCTTAACCCACTGAGCGAGGCCAGAGATAGAACC
CGCAACCTCATGGTTCCTAGTCAGATTTGTTTCTGCTGTGCCAAGATAGGAACTCCCTCT
TTGCATGTGTTTCTGCGTTAGTTTTGCCTTGACATATTGGTAGCTTTTGTTCTTTTCCTA
ACTTTAGCCTTTGTTTCCTTCTTTCGTGTCACTGTAAATATGAATGTTTCTTGAAAATTA
ATTTTTAGAATCTTTGGGGGTATGTTGATACTAAATAGTATAAAAACAAAATACCGTAAT
CCTCATGGTTTTTTAAAGTTATATAGCATTTATCTTTTAAAATAAAGTACACTTGAAAAT
TACCAATGACGCTTTTTGATATTAATTGATGATTGGTAGAGCTGGTTGAAAGTAATTTTC
AGTGTACTGTGCAATACCAAGTGTCCTAGAGAAGTTGTAAATATTAACAAATAAAGCATT
TTGCCAATATATGTTTTTTTAACATGAGTTGAATAACACAGGAAATGGTGTGCTTTTCAA
CTCTATTTAGAAAATTAGGAATTACTTGATTTCTCTTTTTAGGTGCTTAGTAGAAAAAAG
GGTTTCTGTAATTGTGCCGTATGTTATACAGTGTATTCACCAATACAGTGTCTTGCTTGG
GAGGGCTGTAGTCTTCAAAAAGGCATCCATACATTTCAAAATTTGTTGTTTTGTTATCTC
GAAGTCCTTGTTAATCTAAGGTTAAAAGTGACTGCTAGATAGAAAATC

Aligned organism(s): 7 entry(ies)

More info

Aligned organism(s): 7 entry(ies)

Help | Less info


               
               17-375, gnl|bosTau2|chr4 (1021128-1020771)
               


               
               588-714, gnl|bosTau2|chr4 (1019717-1019590)
               

               
               588-714, gnl|Hg17|chr7 (91518625-91518465)
               

               
               588-714, gnl|Mm7|chr5 (3810263-3810412)
               


               
               886-1236, gnl|bosTau2|chr4 (1019561-1019211)
               

               
               886-1236, gnl|Hg17|chr7 (91518367-91518023)
               

               
               886-1236, gnl|Mm7|chr5 (3810451-3810782)

Aligned organism(s): 7 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               17-375, gnl|bosTau2|chr4 (1021128-1020771)
               


               
               588-714, gnl|bosTau2|chr4 (1019717-1019590)
               

               
               588-714, gnl|Hg17|chr7 (91518625-91518465)
               

               
               588-714, gnl|Mm7|chr5 (3810263-3810412)
               


               
               886-1236, gnl|bosTau2|chr4 (1019561-1019211)
               

               
               886-1236, gnl|Hg17|chr7 (91518367-91518023)
               

               
               886-1236, gnl|Mm7|chr5 (3810451-3810782)

	17-375, gnl\|bosTau2\|chr4 (1021128-1020771)

	588-714, gnl\|bosTau2\|chr4 (1019717-1019590)
	588-714, gnl\|Hg17\|chr7 (91518625-91518465)
	588-714, gnl\|Mm7\|chr5 (3810263-3810412)

	886-1236, gnl\|bosTau2\|chr4 (1019561-1019211)
	886-1236, gnl\|Hg17\|chr7 (91518367-91518023)
	886-1236, gnl\|Mm7\|chr5 (3810451-3810782)