Ss1.1-Pig4-TMW8045E08.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CGCGCTCGCCGGTCTTCCGAGCCCGCCACCCGCTCGGTCTTGGCCCCCCCAGCCTACCCA CTTATCTCGCCCCCCTCAATTTCCCCCAACCTGCATTGAGAAGACTTGCTGAGGGTCGCC CCGGTTTCTTGTCGACCGCAGAACCCGAAAGTTTGCAAGAGGAAGAGAGCGCGCGGCGAA CAAGCGGGCAAGGGGCAGCGGCAGCGGCGCCGCCAGGGACCATGGTGCTGCCGGCGCCTC CTCCGCGGGCGTGAAGGCGGCGCTCCCACTCTCCCCTCGGACTCCGCGGTGTCCCAGGAG CTTCTGCTGACAATTCCAGTTTCCACACTCAACATTTGGGCAATGGTGAGGGCTTCGGTC CCTTCTTTGGTTTGCTGTCAACCATGAATGGATGGATTTGATGCCTGCTGGCCAAAAGGT GTCCCTCTGTGTGTTGCAGTCCTGTGGCATTATGCATGCCCCCAGCCAGTGACCCCCCAG GCTTTTTATGGCTGTGAGACACGTTAAAAGTTCAGGGGTAAGAAGTGACCTTTTGAGGTG ACTCTAACTGAAGATTGCTTTACAGAAGCCAGAAAAGGTTTTTGAGTCATGATGCAAGAA TCTGGGACTGAGACAAAAAGTAATGGTTCAGCCATCCAGAATGGGTCGAGCGGCGGCAAC CACTTATTAGAGTGTGGCGGTCTTCGGGAAGGGCGGTCCAACGGAGAGACGCCGGCCGTG GACGTTGGGGCGGCCGATCTGGCCCACGTGCAGCAGCAGCAGCAGGCACTTCAAGTGGCA AGACAGCTTCTTCTCCAGCAGCAACAGCAGCAGCAAGTTAGTGGATTAAAGTCTCCCAAG AGGAATGACAAACAACCAGCCCTTCAGGTTCCCGTGTCAGTGGCTATGATGACACCTCAA GTTATCACTCCCCAGCAAATGCAGCAGATCCTCCAGCAACAAGTGCTGAGCCCTCAGCAG CTCCAGGTTCTCCTCCAGCAGCAGCAGGCCCTCATGCTTCAACAGCAGCAGCTTCAAGAG TTTTATAAAAAACAACAGGAACAGTTGCAGCTTCAACTTTTACAACAACAACATGCTGGA AAACAGCCTAAAGAGCAACAGCAGGTGGCTACCCAGCAGTTGGCTTTTCAGCAGCAGCTT TTACAGATGCAGCAGTTACAGCAGCAGCACCTCCTGTCTTTGCAGCGCCAAGGCCTTCTA ACAATTCAGCCGGGGCAGCCTGCCCTTCCCCTCCAACCCCTCGCTCAAGGCATGATTCCA ACAGAACTGCAG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CGCGCTCGCCGGTCTTCCGAGCCCGCCACCCGCTCGGTCTTGGCCCCCCCAGCCTACCCA CTTATCTCGCCCCCCTCAATTTCCCCCAACCTGCATTGAGAAGACTTGCTGAGGGTCGCC CCGGTTTCTTGTCGACCGCAGAACCCGAAAGTTTGCAAGAGGAAGAGAGCGCGCGGCGAA CAAGCGGGCAAGGGGCAGCGGCAGCGGCGCCGCCAGGGACCATGGTGCTGCCGGCGCCTC CTCCGCGGGCGTGAAGGCGGCGCTCCCACTCTCCCCTCGGACTCCGCGGTGTCCCAGGAG CTTCTGCTGACAATTCCAGTTTCCACACTCAACATTTGGGCAATGGTGAGGGCTTCGGTC CCTTCTTTGGTTTGCTGTCAACCATGAATGGATGGATTTGATGCCTGCTGGCCAAAAGGT GTCCCTCTGTGTGTTGCAGTCCTGTGGCATTATGCATGCCCCCAGCCAGTGACCCCCCAG GCTTTTTATGGCTGTGAGACACGTTAAAAGTTCAGGGGTAAGAAGTGACCTTTTGAGGTG ACTCTAACTGAAGATTGCTTTACAGAAGCCAGAAAAGGTTTTTGAGTCATGATGCAAGAA TCTGGGACTGAGACAAAAAGTAATGGTTCAGCCATCCAGAATGGGTCGAGCGGCGGCAAC CACTTATTAGAGTGTGGCGGTCTTCGGGAAGGGCGGTCCAACGGAGAGACGCCGGCCGTG GACGTTGGGGCGGCCGATCTGGCCCACGTGCAGCAGCAGCAGCAGGCACTTCAAGTGGCA AGACAGCTTCTTCTCCAGCAGCAACAGCAGCAGCAAGTTAGTGGATTAAAGTCTCCCAAG AGGAATGACAAACAACCAGCCCTTCAGGTTCCCGTGTCAGTGGCTATGATGACACCTCAA GTTATCACTCCCCAGCAAATGCAGCAGATCCTCCAGCAACAAGTGCTGAGCCCTCAGCAG CTCCAGGTTCTCCTCCAGCAGCAGCAGGCCCTCATGCTTCAACAGCAGCAGCTTCAAGAG TTTTATAAAAAACAACAGGAACAGTTGCAGCTTCAACTTTTACAACAACAACATGCTGGA AAACAGCCTAAAGAGCAACAGCAGGTGGCTACCCAGCAGTTGGCTTTTCAGCAGCAGCTT TTACAGATGCAGCAGTTACAGCAGCAGCACCTCCTGTCTTTGCAGCGCCAAGGCCTTCTA ACAATTCAGCCGGGGCAGCCTGCCCTTCCCCTCCAACCCCTCGCTCAAGGCATGATTCCA ACAGAACTGCAG |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 58 entry(ies) | More info |
| Aligned organism(s): 58 entry(ies) | Help | Less info |
| 3-289, gnl|bosTau2|chr22 (24104131-24104413) | |
| 3-289, gnl|Hg17|chr3 (71713676-71713390) | |
| 3-289, gnl|Mm7|chr6 (99608958-99608671) | |
| 419-522, gnl|bosTau2|chr22 (24348872-24348973) | |
| 419-522, gnl|canFam2|chr20 (23648591-23648316) | |
| 419-522, gnl|dasNov1|scaffold_28177 (7827-8101) | |
| 419-522, gnl|echTel1|scaffold_317135 (181708-181406) | |
| 419-522, gnl|hg17|chr3 (71490940-71491216) | |
| 419-522, gnl|Hg17|chr3 (71491086-71490986) | |
| 419-522, gnl|loxAfr1|scaffold_8048 (20859-20582) | |
| 419-522, gnl|mm7|chr6 (99396385-99396597) | |
| 419-522, gnl|Mm7|chr6 (99396513-99396413) | |
| 419-522, gnl|monDom2|scaffold_5 (19059432-19059729) | |
| 419-522, gnl|oryCun1|scaffold_213555 (398025-398299) | |
| 419-522, gnl|panTro1|chr2 (73433014-73433290) | |
| 419-522, gnl|rheMac2|chr2 (64857314-64857039) | |
| 419-522, gnl|rn3|chr4 (134399393-134399589) | |
| 576-769, gnl|bosTau2|chr22 (24557688-24557881) | |
| 576-769, gnl|Hg17|chr3 (71330235-71330039) | |
| 576-769, gnl|Mm7|chr6 (99251106-99250910) | |
| 866-1005, gnl|bosTau2|chr22 (24701399-24701538) | |
| 866-1005, gnl|canFam2|chr20 (23929039-23928851) | |
| 866-1005, gnl|danRer3|chr6 (25928832-25928995) | |
| 866-1005, gnl|dasNov1|scaffold_26 (102225-102413) | |
| 866-1005, gnl|echTel1|scaffold_325284 (225861-225672) | |
| 866-1005, gnl|fr1|chrUn (89142499-89142687) | |
| 866-1005, gnl|galGal2|chr12 (15906677-15906849) | |
| 866-1005, gnl|hg17|chr3 (71185473-71185661) | |
| 866-1005, gnl|Hg17|chr3 (71185616-71185477) | |
| 866-1005, gnl|loxAfr1|scaffold_5962 (14915-14727) | |
| 866-1005, gnl|mm7|chr6 (99104599-99104787) | |
| 866-1005, gnl|Mm7|chr6 (99104742-99104603) | |
| 866-1005, gnl|monDom2|scaffold_5 (18755910-18756098) | |
| 866-1005, gnl|oryCun1|scaffold_213555 (84187-84377) | |
| 866-1005, gnl|panTro1|chr2 (73123707-73123895) | |
| 866-1005, gnl|rheMac2|chr2 (65164091-65163903) | |
| 866-1005, gnl|rn3|chr4 (134104270-134104458) | |
| 866-1005, gnl|tetNig1|chr11 (10147434-10147291) | |
| 866-1005, gnl|xenTro1|scaffold_441 (183980-184155) | |
| 1094-1250, gnl|bosTau2|chr22 (24708008-24708164) | |
| 1094-1250, gnl|canFam2|chr20 (23935800-23935630) | |
| 1094-1250, gnl|danRer3|chr6 (25921200-25921364) | |
| 1094-1250, gnl|dasNov1|scaffold_26 (95574-95742) | |
| 1094-1250, gnl|echTel1|scaffold_325284 (232304-232134) | |
| 1094-1250, gnl|fr1|chrUn (89139025-89139188) | |
| 1094-1250, gnl|galGal2|chr12 (15900023-15900190) | |
| 1094-1250, gnl|hg17|chr3 (71178777-71178947) | |
| 1094-1250, gnl|Hg17|chr3 (71178938-71178782) | |
| 1094-1250, gnl|loxAfr1|scaffold_5962 (21683-21513) | |
| 1094-1250, gnl|mm7|chr6 (99097973-99098143) | |
| 1094-1250, gnl|Mm7|chr6 (99098134-99097978) | |
| 1094-1250, gnl|monDom2|scaffold_5 (18748549-18748728) | |
| 1094-1250, gnl|oryCun1|scaffold_213555 (77483-77653) | |
| 1094-1250, gnl|panTro1|chr2 (73116983-73117153) | |
| 1094-1250, gnl|rheMac2|chr2 (65170847-65170677) | |
| 1094-1250, gnl|rn3|chr4 (134097611-134097787) | |
| 1094-1250, gnl|tetNig1|chr11 (10150565-10150400) | |
| 1094-1250, gnl|xenTro1|scaffold_17 (1120904-1120735) |
| Aligned organism(s): 58 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 3-289, gnl|bosTau2|chr22 (24104131-24104413) | |
| 3-289, gnl|Hg17|chr3 (71713676-71713390) | |
| 3-289, gnl|Mm7|chr6 (99608958-99608671) | |
| 419-522, gnl|bosTau2|chr22 (24348872-24348973) | |
| 419-522, gnl|canFam2|chr20 (23648591-23648316) | |
| 419-522, gnl|dasNov1|scaffold_28177 (7827-8101) | |
| 419-522, gnl|echTel1|scaffold_317135 (181708-181406) | |
| 419-522, gnl|hg17|chr3 (71490940-71491216) | |
| 419-522, gnl|Hg17|chr3 (71491086-71490986) | |
| 419-522, gnl|loxAfr1|scaffold_8048 (20859-20582) | |
| 419-522, gnl|mm7|chr6 (99396385-99396597) | |
| 419-522, gnl|Mm7|chr6 (99396513-99396413) | |
| 419-522, gnl|monDom2|scaffold_5 (19059432-19059729) | |
| 419-522, gnl|oryCun1|scaffold_213555 (398025-398299) | |
| 419-522, gnl|panTro1|chr2 (73433014-73433290) | |
| 419-522, gnl|rheMac2|chr2 (64857314-64857039) | |
| 419-522, gnl|rn3|chr4 (134399393-134399589) | |
| 576-769, gnl|bosTau2|chr22 (24557688-24557881) | |
| 576-769, gnl|Hg17|chr3 (71330235-71330039) | |
| 576-769, gnl|Mm7|chr6 (99251106-99250910) | |
| 866-1005, gnl|bosTau2|chr22 (24701399-24701538) | |
| 866-1005, gnl|canFam2|chr20 (23929039-23928851) | |
| 866-1005, gnl|danRer3|chr6 (25928832-25928995) | |
| 866-1005, gnl|dasNov1|scaffold_26 (102225-102413) | |
| 866-1005, gnl|echTel1|scaffold_325284 (225861-225672) | |
| 866-1005, gnl|fr1|chrUn (89142499-89142687) | |
| 866-1005, gnl|galGal2|chr12 (15906677-15906849) | |
| 866-1005, gnl|hg17|chr3 (71185473-71185661) | |
| 866-1005, gnl|Hg17|chr3 (71185616-71185477) | |
| 866-1005, gnl|loxAfr1|scaffold_5962 (14915-14727) | |
| 866-1005, gnl|mm7|chr6 (99104599-99104787) | |
| 866-1005, gnl|Mm7|chr6 (99104742-99104603) | |
| 866-1005, gnl|monDom2|scaffold_5 (18755910-18756098) | |
| 866-1005, gnl|oryCun1|scaffold_213555 (84187-84377) | |
| 866-1005, gnl|panTro1|chr2 (73123707-73123895) | |
| 866-1005, gnl|rheMac2|chr2 (65164091-65163903) | |
| 866-1005, gnl|rn3|chr4 (134104270-134104458) | |
| 866-1005, gnl|tetNig1|chr11 (10147434-10147291) | |
| 866-1005, gnl|xenTro1|scaffold_441 (183980-184155) | |
| 1094-1250, gnl|bosTau2|chr22 (24708008-24708164) | |
| 1094-1250, gnl|canFam2|chr20 (23935800-23935630) | |
| 1094-1250, gnl|danRer3|chr6 (25921200-25921364) | |
| 1094-1250, gnl|dasNov1|scaffold_26 (95574-95742) | |
| 1094-1250, gnl|echTel1|scaffold_325284 (232304-232134) | |
| 1094-1250, gnl|fr1|chrUn (89139025-89139188) | |
| 1094-1250, gnl|galGal2|chr12 (15900023-15900190) | |
| 1094-1250, gnl|hg17|chr3 (71178777-71178947) | |
| 1094-1250, gnl|Hg17|chr3 (71178938-71178782) | |
| 1094-1250, gnl|loxAfr1|scaffold_5962 (21683-21513) | |
| 1094-1250, gnl|mm7|chr6 (99097973-99098143) | |
| 1094-1250, gnl|Mm7|chr6 (99098134-99097978) | |
| 1094-1250, gnl|monDom2|scaffold_5 (18748549-18748728) | |
| 1094-1250, gnl|oryCun1|scaffold_213555 (77483-77653) | |
| 1094-1250, gnl|panTro1|chr2 (73116983-73117153) | |
| 1094-1250, gnl|rheMac2|chr2 (65170847-65170677) | |
| 1094-1250, gnl|rn3|chr4 (134097611-134097787) | |
| 1094-1250, gnl|tetNig1|chr11 (10150565-10150400) | |
| 1094-1250, gnl|xenTro1|scaffold_17 (1120904-1120735) |