Non-Coding RNA Search

Ss1.1-Pig4-TMW8045N18.5

Sequence:


               
               TCACATCTGGCTTGTTCTTTCAGAGTAGGAAAGGCAGAAGTAGCTACAGTTACTATTGGA
TACCTTGCTCATCCTTTAAATTATCTCTAGAAGAAATGCAAGTAACCTGTAAATACCTTC
ACTAATGTTAAGTTCATGGAGGGCAGGGGCCATTTTATTAGTCATGCTTTGTCAGTATAA
ATGTGCTGAGATTAAGCTTCCCCTGGCTTTGTAAAAATTTTTTGAAGAAGATTGAAGAGA
AAAATCGTTAGAATTATCCAGATCACTAATGTGACAGCATTGACTTGATTTTTCTTATCT
GCCAGTCTTCTTTCAAGGAGAGGGTGACACGTTAAATTGCTCCACCTGCTACATCTTAGC
ATGACTAGGTTTATCACATTCTCTTTTCAGTAGGCAAGAGGAAAGGAGAGGCCTGAAGGT
TGTGAAGAGTGTCACAAAAGGACGAACAGATTGAAAGGGAGGGGACCTTCAGAGGCCCCG
GGCAAACCTCATTTACCTGCATCCACACTAAGGGCTTTGAATGGATTCCAAGATTCCTGC
TCCCCTCTGGGGGAAGTTCAACTCTGCATTTTGTTTGGTTTGAATGGTTTTTTGTTTGCT
GGTTTTTATAATTTTTGATACCAGAAGTGTTTTTTTAAAATAGTTATGAAAGCAAAGCTG
CTGTCATCCTGGAATCAGTCACTCAAAGTTAAATGG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TCACATCTGGCTTGTTCTTTCAGAGTAGGAAAGGCAGAAGTAGCTACAGTTACTATTGGA
TACCTTGCTCATCCTTTAAATTATCTCTAGAAGAAATGCAAGTAACCTGTAAATACCTTC
ACTAATGTTAAGTTCATGGAGGGCAGGGGCCATTTTATTAGTCATGCTTTGTCAGTATAA
ATGTGCTGAGATTAAGCTTCCCCTGGCTTTGTAAAAATTTTTTGAAGAAGATTGAAGAGA
AAAATCGTTAGAATTATCCAGATCACTAATGTGACAGCATTGACTTGATTTTTCTTATCT
GCCAGTCTTCTTTCAAGGAGAGGGTGACACGTTAAATTGCTCCACCTGCTACATCTTAGC
ATGACTAGGTTTATCACATTCTCTTTTCAGTAGGCAAGAGGAAAGGAGAGGCCTGAAGGT
TGTGAAGAGTGTCACAAAAGGACGAACAGATTGAAAGGGAGGGGACCTTCAGAGGCCCCG
GGCAAACCTCATTTACCTGCATCCACACTAAGGGCTTTGAATGGATTCCAAGATTCCTGC
TCCCCTCTGGGGGAAGTTCAACTCTGCATTTTGTTTGGTTTGAATGGTTTTTTGTTTGCT
GGTTTTTATAATTTTTGATACCAGAAGTGTTTTTTTAAAATAGTTATGAAAGCAAAGCTG
CTGTCATCCTGGAATCAGTCACTCAAAGTTAAATGG

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

Help | Less info


               
               516-635, + strand, RNAz p=0.530575

Predicted RNA structure(s): 1 entry(ies)

Help | Less info

PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               516-635, + strand, RNAz p=0.530575

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

Help | Less info


               
               89-667, gnl|bosTau2|chr28 (13479378-13478803)
               

               
               89-667, gnl|Hg17|chr10 (63617543-63616981)

Aligned organism(s): 2 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               89-667, gnl|bosTau2|chr28 (13479378-13478803)
               

               
               89-667, gnl|Hg17|chr10 (63617543-63616981)

	89-667, gnl\|bosTau2\|chr28 (13479378-13478803)
	89-667, gnl\|Hg17\|chr10 (63617543-63616981)