Non-Coding RNA Search

Ss1.1-Pig4-TMW8046A20.3

Sequence:


               
               TACATGCTGGGTATAGACATGACCAAGAAGGCTGGGGGCGGGGGGCACTTCCAACAGCCT
TGAAATCTGAAAGATTTCCTTATTCCGCAGACCCATGGGTCTGGGCCTGGTTGGTCGCCC
AGTACAGGCGGTTATTCATCTGTCTTCCGCTTGCTTGGCTGTGATGTCAGCTCTTCGTGT
CTACTTTAAAAGGCAGGCATTTCTTGTTGTTGTTATGCTCATTGAATAATGCAGTAGTTT
GTCACACTTCTAGCATGATTAAAACAGATAAACTATGGCCTTTGTAGAGGGTTTTTCTCA
GCCTCTCCTTTTGGTTTATTTAGTTTCTCTTTTGACAAAGATTTTGTATTAAATTCAGCC
ATTCAGATTGTATTTGTGATTTAACTATGAGATGTGAATATTTATATTTCATGGTTGTAA
AACAGTGGCCAAGTTTTTTCATAAATTAGTGGGAAAAAGTTTCTGACATTTTTCTACTTG
CAAATGAGGAATTTGAGGTCATCTCAGTTCTTCCACAGTAAATGTGTCTTAAAAAAAAAA
AATCAGAGTGGGAAATCCTTTGTATTGGAAGCCATGGGCCCCTTTGTATAGTTTACAATA
ATAGTTTTGAACAAATAATTTCAGGTTAAAATTGCATACTATTTATTCCCACCCATTTCC
TTTATTGGCTGTGACACACAGGAATTACGCCCAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TACATGCTGGGTATAGACATGACCAAGAAGGCTGGGGGCGGGGGGCACTTCCAACAGCCT
TGAAATCTGAAAGATTTCCTTATTCCGCAGACCCATGGGTCTGGGCCTGGTTGGTCGCCC
AGTACAGGCGGTTATTCATCTGTCTTCCGCTTGCTTGGCTGTGATGTCAGCTCTTCGTGT
CTACTTTAAAAGGCAGGCATTTCTTGTTGTTGTTATGCTCATTGAATAATGCAGTAGTTT
GTCACACTTCTAGCATGATTAAAACAGATAAACTATGGCCTTTGTAGAGGGTTTTTCTCA
GCCTCTCCTTTTGGTTTATTTAGTTTCTCTTTTGACAAAGATTTTGTATTAAATTCAGCC
ATTCAGATTGTATTTGTGATTTAACTATGAGATGTGAATATTTATATTTCATGGTTGTAA
AACAGTGGCCAAGTTTTTTCATAAATTAGTGGGAAAAAGTTTCTGACATTTTTCTACTTG
CAAATGAGGAATTTGAGGTCATCTCAGTTCTTCCACAGTAAATGTGTCTTAAAAAAAAAA
AATCAGAGTGGGAAATCCTTTGTATTGGAAGCCATGGGCCCCTTTGTATAGTTTACAATA
ATAGTTTTGAACAAATAATTTCAGGTTAAAATTGCATACTATTTATTCCCACCCATTTCC
TTTATTGGCTGTGACACACAGGAATTACGCCCAAAA

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

Help | Less info


               
               40-158, - strand, RNAz p=0.83638

Predicted RNA structure(s): 1 entry(ies)

Help | Less info

PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               40-158, - strand, RNAz p=0.83638

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

Help | Less info


               
               40-693, gnl|bosTau2|chr13 (51456209-51455553)
               

               
               40-693, gnl|Hg17|chr20 (39311667-39310996)
               

               
               40-693, gnl|Mm7|chr2 (160546938-160546337)

Aligned organism(s): 3 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               40-693, gnl|bosTau2|chr13 (51456209-51455553)
               

               
               40-693, gnl|Hg17|chr20 (39311667-39310996)
               

               
               40-693, gnl|Mm7|chr2 (160546938-160546337)

	40-693, gnl\|bosTau2\|chr13 (51456209-51455553)
	40-693, gnl\|Hg17\|chr20 (39311667-39310996)
	40-693, gnl\|Mm7\|chr2 (160546938-160546337)