Non-Coding RNA Search

Ss1.1-Pig4-TMW8046C12.5

Sequence:


               
               ATAAGGCAGCAAGAGGCTTGAGTCCATGGACGGCACCATGGGGCTGCAGGGGCTGCTCTG
CCTGTGCCTGGCGTCCCACCTCGCCCTGCAGGCCATGCCCACTCAAGGTTCACCCACAGA
CAGTACCAAAGGCAACAAGGCCGTCAATGGTGTGGTCATTCGGAGTTTGAAAGTCAACTG
CAAGGTCACCTCTCGCTTCGCCCACTACGTTGTCACCAGCCAAGTGGTCAACAATGCCAA
CAAAGCCAAGGAAGTGGCCTTCGATGTGGAAATCCCCAAGACAGCCTTCATCAGCGACTT
TGCCATCACAGCAGATGAAAACACATTTGTGGGGGACATAAAGGACAAAGTGACTGCATG
GAAGCAGTACCGGAAAGCAGCCATTTCAGGAGAGAATTCTGGCCTCGTCAGGGCCTCAGG
GAGAACAATGGAGCAATTTGCCATCCACGTCACCATTGGTCCTCGGAGCAAGGCCACATT
CCAGCTAACCTACGAGGAGGTGCTGAGGCGCAAGCTTACGCAGTATGACATTGTCATCAA
GGTCAAACCCAAGCAGCTGGTGCAGCATTTTGAGATCGACGTGGACATCTTTGAGCCCCA
GGGGATCAGCAAGCTGGATGCCCAGGCCTCCTTCCTTTCCAAGGAAGCAGCAGCCCAACT
CATCAAGAAGTCCTTCTCAGGGAAAAAGGGTCATGTGCTTTTCCGCCCCACGGTGGGCCA
GCAACAATCCTGCCCCACATGCTCTACGACTCTGCTGAACGGGGACTTCAAGGTGACCTA
CGATGTCAATCGGGAGAAGCTCTGTGACCTCCTGGTCGCCAACAACTACTTTGCCCACTT
CTTTGCCCCCCAAAACCTGACAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ATAAGGCAGCAAGAGGCTTGAGTCCATGGACGGCACCATGGGGCTGCAGGGGCTGCTCTG
CCTGTGCCTGGCGTCCCACCTCGCCCTGCAGGCCATGCCCACTCAAGGTTCACCCACAGA
CAGTACCAAAGGCAACAAGGCCGTCAATGGTGTGGTCATTCGGAGTTTGAAAGTCAACTG
CAAGGTCACCTCTCGCTTCGCCCACTACGTTGTCACCAGCCAAGTGGTCAACAATGCCAA
CAAAGCCAAGGAAGTGGCCTTCGATGTGGAAATCCCCAAGACAGCCTTCATCAGCGACTT
TGCCATCACAGCAGATGAAAACACATTTGTGGGGGACATAAAGGACAAAGTGACTGCATG
GAAGCAGTACCGGAAAGCAGCCATTTCAGGAGAGAATTCTGGCCTCGTCAGGGCCTCAGG
GAGAACAATGGAGCAATTTGCCATCCACGTCACCATTGGTCCTCGGAGCAAGGCCACATT
CCAGCTAACCTACGAGGAGGTGCTGAGGCGCAAGCTTACGCAGTATGACATTGTCATCAA
GGTCAAACCCAAGCAGCTGGTGCAGCATTTTGAGATCGACGTGGACATCTTTGAGCCCCA
GGGGATCAGCAAGCTGGATGCCCAGGCCTCCTTCCTTTCCAAGGAAGCAGCAGCCCAACT
CATCAAGAAGTCCTTCTCAGGGAAAAAGGGTCATGTGCTTTTCCGCCCCACGGTGGGCCA
GCAACAATCCTGCCCCACATGCTCTACGACTCTGCTGAACGGGGACTTCAAGGTGACCTA
CGATGTCAATCGGGAGAAGCTCTGTGACCTCCTGGTCGCCAACAACTACTTTGCCCACTT
CTTTGCCCCCCAAAACCTGACAAA

Aligned organism(s): 9 entry(ies)

More info

Aligned organism(s): 9 entry(ies)

Help | Less info


               
               138-306, gnl|bosTau2|chr22 (42354079-42353911)
               

               
               138-306, gnl|Hg17|chr3 (52787394-52787562)
               

               
               138-306, gnl|Mm7|chr14 (28372299-28372131)
               


               
               409-574, gnl|bosTau2|chr22 (42353029-42352864)
               

               
               409-574, gnl|Hg17|chr3 (52788485-52788650)
               

               
               409-574, gnl|Mm7|chr14 (28371318-28371153)
               


               
               687-816, gnl|bosTau2|chr22 (42350143-42350014)
               

               
               687-816, gnl|Hg17|chr3 (52790994-52791123)
               

               
               687-816, gnl|Mm7|chr14 (28367830-28367701)

Aligned organism(s): 9 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               138-306, gnl|bosTau2|chr22 (42354079-42353911)
               

               
               138-306, gnl|Hg17|chr3 (52787394-52787562)
               

               
               138-306, gnl|Mm7|chr14 (28372299-28372131)
               


               
               409-574, gnl|bosTau2|chr22 (42353029-42352864)
               

               
               409-574, gnl|Hg17|chr3 (52788485-52788650)
               

               
               409-574, gnl|Mm7|chr14 (28371318-28371153)
               


               
               687-816, gnl|bosTau2|chr22 (42350143-42350014)
               

               
               687-816, gnl|Hg17|chr3 (52790994-52791123)
               

               
               687-816, gnl|Mm7|chr14 (28367830-28367701)

	138-306, gnl\|bosTau2\|chr22 (42354079-42353911)
	138-306, gnl\|Hg17\|chr3 (52787394-52787562)
	138-306, gnl\|Mm7\|chr14 (28372299-28372131)

	409-574, gnl\|bosTau2\|chr22 (42353029-42352864)
	409-574, gnl\|Hg17\|chr3 (52788485-52788650)
	409-574, gnl\|Mm7\|chr14 (28371318-28371153)

	687-816, gnl\|bosTau2\|chr22 (42350143-42350014)
	687-816, gnl\|Hg17\|chr3 (52790994-52791123)
	687-816, gnl\|Mm7\|chr14 (28367830-28367701)