Ss1.1-Pig4-TMW8047A07.5
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GACCGGCAGCAGTTGAGCATAGAACTTGGTCCTGACGCTGGGGCACCCGGCGACAAGTGA
TGCCGACTGACGCAAAGAAAAACAAAAGTGCGGCTCCTACTGCCAGGTGACCCGGCCTCT
CCACAGTTACCTGGCTCAGTACTTGGCTGCCTGAGCCACAGGACGCGCGTCAGGACTGCT
TCCCCTGGAATTTGTAATCGGAACAGGGAGAGATGCTGAGGGACCTGGGCTCCCCTGACT
TGCCCAGTGTGCTCTGGGGCCACGTCTGTGTCATGTATGATGGGAAGACGGGACAGAGGG
GGGCAGAGGGGGGCAGACGGAGTTCCTGGGCGGAGAGAAGCAGGAGCTTCCGGCTCAGTG
TGGCAGGCTAGACCCCCCGGTTATCGCCACTCCCTTGGCAGAGCTCGCTCAGGACACAGC
ACAGGAACTGGGGCGTGATGCCCAGAGCTGACCAGGGAGGAGCACGCACACGAGACGCAA
AGCTGTTGGAGGCAGGAGAGCTGCTGGACGAATGCATTTGAATCTCACTCTTCAATGTGA
ATAAATAGCCAAGATCACCTGACCTTGGAGGGAAGGTTCCCAGATGAGATGGTGATAAAC
ACCAACAGAAAGAGGAGTTCTGCGCAGGGAGAGACAGTGCAGAGAGCGGAGAACGTCGGA
GAAGCAGAGACGAGAGGCTAGCCCCCAAGCGTGACTTTGCTGGCTTCCCAGTGTTCACGT
CCTCTGGAGTCCCTGCCTTGCCCATCCCTGGTTTCTGTGGCACAACCCTCTGTCTGCCAA
AGAGCCCCCAGGTGCTGAAGATGCTATGAATGTGTTTCCTTCCCTTCTGACCAAAGGGGT
GCCTGCCCCCACCCCTCATCCTGCTGACCCCAGCAGCTTGGAAGAAGAGGCCTCCCCTGG
GTTAGCAGTCGGCCCAGCATCTCTGCCAAGTGACCCTGGCAGCTGCAGCCTCCCCAAGCC
CCCAGGGAACCAGGGGCATGTCCAAAAGGCTCCATCTGAGGCTGGCTCAGCTCCCGGCTG
CCCTCTTGCTGGCAGGGGATGGAGCCAATTGGCCCTGTGTCTGCATTGGGAGCTGTGAGC
CCACGCTTGTTTGTAGCCGTCACCAGTGTCCTCTCTCTTTCGCTGGACCAGGCAGGGCTC
AGGCTCCTTTGTGTCCTCTCTCCTCCATGTCCAGAAGCTCTGGGGCCACGGTCTTGATTA
ACCTAACCCTCTTCAAATGAATAAATAATATGCCCT
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Blue-coloured subsequences are predicted RNA structures by RNAz
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GACCGGCAGCAGTTGAGCATAGAACTTGGTCCTGACGCTGGGGCACCCGGCGACAAGTGA
TGCCGACTGACGCAAAGAAAAACAAAAGTGCGGCTCCTACTGCCAGGTGACCCGGCCTCT
CCACAGTTACCTGGCTCAGTACTTGGCTGCCTGAGCCACAGGACGCGCGTCAGGACTGCT
TCCCCTGGAATTTGTAATCGGAACAGGGAGAGATGCTGAGGGACCTGGGCTCCCCTGACT
TGCCCAGTGTGCTCTGGGGCCACGTCTGTGTCATGTATGATGGGAAGACGGGACAGAGGG
GGGCAGAGGGGGGCAGACGGAGTTCCTGGGCGGAGAGAAGCAGGAGCTTCCGGCTCAGTG
TGGCAGGCTAGACCCCCCGGTTATCGCCACTCCCTTGGCAGAGCTCGCTCAGGACACAGC
ACAGGAACTGGGGCGTGATGCCCAGAGCTGACCAGGGAGGAGCACGCACACGAGACGCAA
AGCTGTTGGAGGCAGGAGAGCTGCTGGACGAATGCATTTGAATCTCACTCTTCAATGTGA
ATAAATAGCCAAGATCACCTGACCTTGGAGGGAAGGTTCCCAGATGAGATGGTGATAAAC
ACCAACAGAAAGAGGAGTTCTGCGCAGGGAGAGACAGTGCAGAGAGCGGAGAACGTCGGA
GAAGCAGAGACGAGAGGCTAGCCCCCAAGCGTGACTTTGCTGGCTTCCCAGTGTTCACGT
CCTCTGGAGTCCCTGCCTTGCCCATCCCTGGTTTCTGTGGCACAACCCTCTGTCTGCCAA
AGAGCCCCCAGGTGCTGAAGATGCTATGAATGTGTTTCCTTCCCTTCTGACCAAAGGGGT
GCCTGCCCCCACCCCTCATCCTGCTGACCCCAGCAGCTTGGAAGAAGAGGCCTCCCCTGG
GTTAGCAGTCGGCCCAGCATCTCTGCCAAGTGACCCTGGCAGCTGCAGCCTCCCCAAGCC
CCCAGGGAACCAGGGGCATGTCCAAAAGGCTCCATCTGAGGCTGGCTCAGCTCCCGGCTG
CCCTCTTGCTGGCAGGGGATGGAGCCAATTGGCCCTGTGTCTGCATTGGGAGCTGTGAGC
CCACGCTTGTTTGTAGCCGTCACCAGTGTCCTCTCTCTTTCGCTGGACCAGGCAGGGCTC
AGGCTCCTTTGTGTCCTCTCTCCTCCATGTCCAGAAGCTCTGGGGCCACGGTCTTGATTA
ACCTAACCCTCTTCAAATGAATAAATAATATGCCCT
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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
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904-1060, - strand, RNAmicro p=0.984615 |
PigEST conread start position and end position of the predicted microRNA,
PigEST conread reading direction of prediction,
miRNA classificator p of RNAmicro
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904-1060, - strand, RNAmicro p=0.984615 |
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830-1219, gnl|bosTau2|chr13 (40742768-40742367) |
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830-1219, gnl|canFam2|chr24 (44799915-44800276) |
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830-1219, gnl|echTel1|scaffold_324247 (1887-1521) |
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830-1219, gnl|hg17|chr20 (54694363-54694749) |
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830-1219, gnl|Hg17|chr20 (54694381-54694776) |
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830-1219, gnl|Mm7|chr2 (172371895-172372242) |
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830-1219, gnl|panTro1|chr21 (57616650-57617035) |
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830-1219, gnl|rheMac2|chr10 (7857276-7856889) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
830-1219, gnl|bosTau2|chr13 (40742768-40742367) |
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830-1219, gnl|canFam2|chr24 (44799915-44800276) |
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830-1219, gnl|echTel1|scaffold_324247 (1887-1521) |
|
830-1219, gnl|hg17|chr20 (54694363-54694749) |
|
830-1219, gnl|Hg17|chr20 (54694381-54694776) |
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830-1219, gnl|Mm7|chr2 (172371895-172372242) |
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830-1219, gnl|panTro1|chr21 (57616650-57617035) |
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830-1219, gnl|rheMac2|chr10 (7857276-7856889) |
