Ss1.1-Pig4-TMW8047A13.3
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CTAAAGTGAATGTTAGTGTTTTAGGAATCCTTCTAGGTCAGAAAGAAGGAAAACAAATAT TAAAGAAAAATGAGATCCTCCATCTTGGAGGAAGGTGCTATGGTCGTGCATTAAAACTGA TGTCTACCTCTAATACGTGGTGTGATCTTGGAATTAATTATTATCGTCGAGCACAACACC TAGTGGAAACAGGCAGCAACTCGAATGACCTTCAAGAGTTGTTGGAGAAATCTTTACATT GTCTGAAAAAGGCTGTGAGACTTGACAGTAGTAATCACTTGTACTGGAATGCTCTTGGTG TAGTTTCATGTTACAGTGGTATTGGAAATTACGCTCTCGCTCAACACTGTTTCATCAAAT CAATCCAGTCGGAACAAATTAATGCTGTTGCGTGGACCAACTTGGGAGTGTTATACCTTG CAAATGAAAAAATTGAGCAAGCTCATGAAGCTTTCAAAATGGCTCAGTCCCTTGATCCAT CTTACCTACTGTGCTGGATTGGACAAGCTCTAATTGCAGAGACAGTTGGAAGCTATGACA CCATGGATCTCTTCAGGCATACTACAGAACTCAGTATGCACACTGAGGGAGCAATAGGTT ATGCATATTGGGTCTGTACAACATTGCAAGATAAAAGCAACAGAGACACAGAGCTGTACC AGTACAACATTCTCCAGATGAATGCAGTTCCAGCAGCACAAGTGGTTTTGAGTAAATATA TAGAAAGAATTCAGAATTATGCTCCAGCTTTCACCATGCTGGGTTACTTAAATGAACATC TACAACTGAAAAAGGAAGCAGCAGATGCATACCAAGGGGCAATTTTGTTGTTACAGACTG CAGAAGACCCAGATACTTACTATGTTACAATGAGAGATTATGGCAGATTACTATGTTCCA TTGGTGAATATGATAAAGCTATCCAAGCTTTTAAGTCAACACCCCTTGAGGAGTTAGAAG ACATCGTAGGTTTCGCATTGGCTTTATTTATGAAAGGTCTGTATAAGGAGAGCAGCAAAG CCTATGAGAGAGCCTTGTCTGTTGTTGAATCAGAGCAAGACAAAGCTCATATCTTGACAG CTCTGGCAATAACGGAGTATAAACAAGGAAAAATGGATGTAGCTAAGACATTGCTGTTTA AATGCTCTATCTTAAAAGAACCAACCACGGAAAGCCTTCAAACCCTGTGTGCTCTAGGAT TGGCAATGCAGGATGCTACACTATCAAAAGCTGCACTTAATGAGTTACTGAAACATGTCA AGCAGAAAGACAATGATTATCAGAGGTGCCTTCTTACTTCAGCAATTTATGCACTGCAAG GCCGCAGTGTGGCAGTGCAGAGACAAGCATCTAAAGCTGTTCACAGTAACCCAGCTGATC CTGCTCTTTGGTCTTTCTTGTCCCGAGTGGTTGCTCAGTATACTCAACGAAGTGCAAAGG GCGGTGCCGTAGCAGGAAATGTGGCTCATATTCCGACTCAAATCATGGAAAGAAGGCATT ACTGTACACTGCAGTAAATCAGTTGGCTATGGGAAGCAACTCAGCAGAAGATGAGAAAAA TACTGCCCTAAAGACCATTCAGAA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CTAAAGTGAATGTTAGTGTTTTAGGAATCCTTCTAGGTCAGAAAGAAGGAAAACAAATAT TAAAGAAAAATGAGATCCTCCATCTTGGAGGAAGGTGCTATGGTCGTGCATTAAAACTGA TGTCTACCTCTAATACGTGGTGTGATCTTGGAATTAATTATTATCGTCGAGCACAACACC TAGTGGAAACAGGCAGCAACTCGAATGACCTTCAAGAGTTGTTGGAGAAATCTTTACATT GTCTGAAAAAGGCTGTGAGACTTGACAGTAGTAATCACTTGTACTGGAATGCTCTTGGTG TAGTTTCATGTTACAGTGGTATTGGAAATTACGCTCTCGCTCAACACTGTTTCATCAAAT CAATCCAGTCGGAACAAATTAATGCTGTTGCGTGGACCAACTTGGGAGTGTTATACCTTG CAAATGAAAAAATTGAGCAAGCTCATGAAGCTTTCAAAATGGCTCAGTCCCTTGATCCAT CTTACCTACTGTGCTGGATTGGACAAGCTCTAATTGCAGAGACAGTTGGAAGCTATGACA CCATGGATCTCTTCAGGCATACTACAGAACTCAGTATGCACACTGAGGGAGCAATAGGTT ATGCATATTGGGTCTGTACAACATTGCAAGATAAAAGCAACAGAGACACAGAGCTGTACC AGTACAACATTCTCCAGATGAATGCAGTTCCAGCAGCACAAGTGGTTTTGAGTAAATATA TAGAAAGAATTCAGAATTATGCTCCAGCTTTCACCATGCTGGGTTACTTAAATGAACATC TACAACTGAAAAAGGAAGCAGCAGATGCATACCAAGGGGCAATTTTGTTGTTACAGACTG CAGAAGACCCAGATACTTACTATGTTACAATGAGAGATTATGGCAGATTACTATGTTCCA TTGGTGAATATGATAAAGCTATCCAAGCTTTTAAGTCAACACCCCTTGAGGAGTTAGAAG ACATCGTAGGTTTCGCATTGGCTTTATTTATGAAAGGTCTGTATAAGGAGAGCAGCAAAG CCTATGAGAGAGCCTTGTCTGTTGTTGAATCAGAGCAAGACAAAGCTCATATCTTGACAG CTCTGGCAATAACGGAGTATAAACAAGGAAAAATGGATGTAGCTAAGACATTGCTGTTTA AATGCTCTATCTTAAAAGAACCAACCACGGAAAGCCTTCAAACCCTGTGTGCTCTAGGAT TGGCAATGCAGGATGCTACACTATCAAAAGCTGCACTTAATGAGTTACTGAAACATGTCA AGCAGAAAGACAATGATTATCAGAGGTGCCTTCTTACTTCAGCAATTTATGCACTGCAAG GCCGCAGTGTGGCAGTGCAGAGACAAGCATCTAAAGCTGTTCACAGTAACCCAGCTGATC CTGCTCTTTGGTCTTTCTTGTCCCGAGTGGTTGCTCAGTATACTCAACGAAGTGCAAAGG GCGGTGCCGTAGCAGGAAATGTGGCTCATATTCCGACTCAAATCATGGAAAGAAGGCATT ACTGTACACTGCAGTAAATCAGTTGGCTATGGGAAGCAACTCAGCAGAAGATGAGAAAAA TACTGCCCTAAAGACCATTCAGAA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 43 entry(ies) | More info |
| Aligned organism(s): 43 entry(ies) | Help | Less info |
| 93-246, gnl|bosTau2|chr7 (59415002-59414850) | |
| 93-246, gnl|Hg17|chr5 (94878522-94878370) | |
| 93-246, gnl|Mm7|chr13 (73146549-73146698) | |
| 579-718, gnl|bosTau2|chr7 (59406860-59406721) | |
| 579-718, gnl|canFam2|chr3 (16955475-16955314) | |
| 579-718, gnl|danRer3|chr5 (58915685-58915529) | |
| 579-718, gnl|dasNov1|scaffold_6395 (51401-51562) | |
| 579-718, gnl|echTel1|scaffold_308984 (89409-89573) | |
| 579-718, gnl|fr1|chrUn (217698571-217698410) | |
| 579-718, gnl|galGal2|chrW (3299562-3299734) | |
| 579-718, gnl|hg17|chr5 (94873935-94874096) | |
| 579-718, gnl|Hg17|chr5 (94874081-94873942) | |
| 579-718, gnl|loxAfr1|scaffold_16936 (12083-11917) | |
| 579-718, gnl|mm7|chr13 (73152277-73152120) | |
| 579-718, gnl|Mm7|chr13 (73152129-73152268) | |
| 579-718, gnl|monDom2|scaffold_20 (2374587-2374426) | |
| 579-718, gnl|oryCun1|scaffold_206348 (9213-9052) | |
| 579-718, gnl|panTro1|chr4 (20303978-20303817) | |
| 579-718, gnl|rheMac2|chr6 (91736326-91736486) | |
| 579-718, gnl|rn3|chr2 (3265760-3265597) | |
| 579-718, gnl|tetNig1|chr12 (1263231-1263079) | |
| 579-718, gnl|xenTro1|scaffold_45 (1734189-1734029) | |
| 895-1020, gnl|bosTau2|chr7 (59398733-59398608) | |
| 895-1020, gnl|canFam2|chr3 (16964222-16964027) | |
| 895-1020, gnl|danRer3|chr5 (58918345-58918175) | |
| 895-1020, gnl|dasNov1|scaffold_6395 (45757-45945) | |
| 895-1020, gnl|echTel1|scaffold_308984 (82207-82402) | |
| 895-1020, gnl|fr1|chrUn (217699131-217698974) | |
| 895-1020, gnl|galGal2|chrW (3295832-3296003) | |
| 895-1020, gnl|hg17|chr5 (94865249-94865444) | |
| 895-1020, gnl|Hg17|chr5 (94865399-94865274) | |
| 895-1020, gnl|loxAfr1|scaffold_16936 (20774-20579) | |
| 895-1020, gnl|mm7|chr13 (73159447-73159271) | |
| 895-1020, gnl|Mm7|chr13 (73159315-73159440) | |
| 895-1020, gnl|monDom2|scaffold_20 (2384591-2384400) | |
| 895-1020, gnl|oryCun1|scaffold_206348 (15712-15515) | |
| 895-1020, gnl|panTro1|chr4 (20312697-20312502) | |
| 895-1020, gnl|rheMac2|chr6 (91727576-91727772) | |
| 895-1020, gnl|rn3|chr2 (3271994-3271817) | |
| 895-1020, gnl|xenTro1|scaffold_45 (1735984-1735805) | |
| 1137-1366, gnl|bosTau2|chr7 (59393748-59393523) | |
| 1137-1366, gnl|Hg17|chr5 (94860058-94859830) | |
| 1137-1366, gnl|Mm7|chr13 (73162115-73162340) |
| Aligned organism(s): 43 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 93-246, gnl|bosTau2|chr7 (59415002-59414850) | |
| 93-246, gnl|Hg17|chr5 (94878522-94878370) | |
| 93-246, gnl|Mm7|chr13 (73146549-73146698) | |
| 579-718, gnl|bosTau2|chr7 (59406860-59406721) | |
| 579-718, gnl|canFam2|chr3 (16955475-16955314) | |
| 579-718, gnl|danRer3|chr5 (58915685-58915529) | |
| 579-718, gnl|dasNov1|scaffold_6395 (51401-51562) | |
| 579-718, gnl|echTel1|scaffold_308984 (89409-89573) | |
| 579-718, gnl|fr1|chrUn (217698571-217698410) | |
| 579-718, gnl|galGal2|chrW (3299562-3299734) | |
| 579-718, gnl|hg17|chr5 (94873935-94874096) | |
| 579-718, gnl|Hg17|chr5 (94874081-94873942) | |
| 579-718, gnl|loxAfr1|scaffold_16936 (12083-11917) | |
| 579-718, gnl|mm7|chr13 (73152277-73152120) | |
| 579-718, gnl|Mm7|chr13 (73152129-73152268) | |
| 579-718, gnl|monDom2|scaffold_20 (2374587-2374426) | |
| 579-718, gnl|oryCun1|scaffold_206348 (9213-9052) | |
| 579-718, gnl|panTro1|chr4 (20303978-20303817) | |
| 579-718, gnl|rheMac2|chr6 (91736326-91736486) | |
| 579-718, gnl|rn3|chr2 (3265760-3265597) | |
| 579-718, gnl|tetNig1|chr12 (1263231-1263079) | |
| 579-718, gnl|xenTro1|scaffold_45 (1734189-1734029) | |
| 895-1020, gnl|bosTau2|chr7 (59398733-59398608) | |
| 895-1020, gnl|canFam2|chr3 (16964222-16964027) | |
| 895-1020, gnl|danRer3|chr5 (58918345-58918175) | |
| 895-1020, gnl|dasNov1|scaffold_6395 (45757-45945) | |
| 895-1020, gnl|echTel1|scaffold_308984 (82207-82402) | |
| 895-1020, gnl|fr1|chrUn (217699131-217698974) | |
| 895-1020, gnl|galGal2|chrW (3295832-3296003) | |
| 895-1020, gnl|hg17|chr5 (94865249-94865444) | |
| 895-1020, gnl|Hg17|chr5 (94865399-94865274) | |
| 895-1020, gnl|loxAfr1|scaffold_16936 (20774-20579) | |
| 895-1020, gnl|mm7|chr13 (73159447-73159271) | |
| 895-1020, gnl|Mm7|chr13 (73159315-73159440) | |
| 895-1020, gnl|monDom2|scaffold_20 (2384591-2384400) | |
| 895-1020, gnl|oryCun1|scaffold_206348 (15712-15515) | |
| 895-1020, gnl|panTro1|chr4 (20312697-20312502) | |
| 895-1020, gnl|rheMac2|chr6 (91727576-91727772) | |
| 895-1020, gnl|rn3|chr2 (3271994-3271817) | |
| 895-1020, gnl|xenTro1|scaffold_45 (1735984-1735805) | |
| 1137-1366, gnl|bosTau2|chr7 (59393748-59393523) | |
| 1137-1366, gnl|Hg17|chr5 (94860058-94859830) | |
| 1137-1366, gnl|Mm7|chr13 (73162115-73162340) |