Ss1.1-Pig4-TMW8047J08.3
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TAATGTTGAAGGATATCGTCGAGAAATAACGTCTCTGCATGAGAGAAATCAGAAACTCAC
TGCAACAACTCAGAAGCAGGAACAGATCATCAATACAATGACCCAGGATTTGAGAGGCGC
TAATGAAAAGCTGGCTGTTGCAGAGGTAAGAGCAGAAAATTTGAAAAAAGAAAAGGAAAT
GCTTAAGTTGTCAGAAGTTCGTCTTTCTCAGCAAAGAGAATCTTTGTTGGCTGAACAAAG
AGGACAAAACTTGCTGCTAACTAATCTGCAGACAATTCAGGGAATATTAGAGCGATCTGA
AACGGAAACCAAACAAAGGCTTAGTAACCAGATTGAGAAACTGGAACATGAAATATCCCA
TCTAAAGAAAAAGTTGGAAAATGAGGTGGAACAAAGACACACACTTACGCGGAATCTAGA
TGTTCAACTTTTAGATACAAAGAGACAGCTGGATACTGAGACAAACCTCCATCTTAACAC
AAAAGAATTGTTTAAAAATGCTCAAAAGGAGATTGCTACCCTGAAGCAGCATCTCAGTAA
TATGGAGGCCCAGCTTGCTTCTCAGTCCTCACAGAGATCTGGTAAAGGTCAGCCTAGCAA
CAAAGAAGATATGGATGACCTTCTGAGTCAGCTAAGACAAGCAGAAGAGCAGGTGAACGA
TTTGAAGGAGAGACTCAAGACAAGTACGAGTAATGTGGAACAGTATCGTGCCATGGTGAC
TAGTTTAGAAGAGTCCCTCAAAAAAACTTTGCAGACTTGGAAGATTCAGAATAGTTGTGC
ATACAGCAGCTGACCAAGGTATGCTCTTTAGTTTTTCAGTTGTCAAAA
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Blue-coloured subsequences are predicted RNA structures by RNAz
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TAATGTTGAAGGATATCGTCGAGAAATAACGTCTCTGCATGAGAGAAATCAGAAACTCAC
TGCAACAACTCAGAAGCAGGAACAGATCATCAATACAATGACCCAGGATTTGAGAGGCGC
TAATGAAAAGCTGGCTGTTGCAGAGGTAAGAGCAGAAAATTTGAAAAAAGAAAAGGAAAT
GCTTAAGTTGTCAGAAGTTCGTCTTTCTCAGCAAAGAGAATCTTTGTTGGCTGAACAAAG
AGGACAAAACTTGCTGCTAACTAATCTGCAGACAATTCAGGGAATATTAGAGCGATCTGA
AACGGAAACCAAACAAAGGCTTAGTAACCAGATTGAGAAACTGGAACATGAAATATCCCA
TCTAAAGAAAAAGTTGGAAAATGAGGTGGAACAAAGACACACACTTACGCGGAATCTAGA
TGTTCAACTTTTAGATACAAAGAGACAGCTGGATACTGAGACAAACCTCCATCTTAACAC
AAAAGAATTGTTTAAAAATGCTCAAAAGGAGATTGCTACCCTGAAGCAGCATCTCAGTAA
TATGGAGGCCCAGCTTGCTTCTCAGTCCTCACAGAGATCTGGTAAAGGTCAGCCTAGCAA
CAAAGAAGATATGGATGACCTTCTGAGTCAGCTAAGACAAGCAGAAGAGCAGGTGAACGA
TTTGAAGGAGAGACTCAAGACAAGTACGAGTAATGTGGAACAGTATCGTGCCATGGTGAC
TAGTTTAGAAGAGTCCCTCAAAAAAACTTTGCAGACTTGGAAGATTCAGAATAGTTGTGC
ATACAGCAGCTGACCAAGGTATGCTCTTTAGTTTTTCAGTTGTCAAAA
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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
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1-150, gnl|bosTau2|chr16 (49018440-49018589) |
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1-150, gnl|canFam2|chr7 (22388618-22388854) |
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1-150, gnl|danRer3|chr20 (42683949-42684172) |
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1-150, gnl|dasNov1|scaffold_784 (100180-99959) |
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1-150, gnl|echTel1|scaffold_311559 (60956-61193) |
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1-150, gnl|fr1|chrUn (175394658-175394454) |
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1-150, gnl|galGal2|chr8 (9880232-9880021) |
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1-150, gnl|hg17|chr1 (183054433-183054666) |
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1-150, gnl|Hg17|chr1 (183054621-183054472) |
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1-150, gnl|loxAfr1|scaffold_19259 (9848-9613) |
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1-150, gnl|mm7|chr1 (150341916-150341713) |
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1-150, gnl|Mm7|chr1 (150341742-150341891) |
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1-150, gnl|monDom2|scaffold_16 (40758565-40758788) |
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1-150, gnl|oryCun1|scaffold_202902 (54547-54770) |
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1-150, gnl|panTro1|chr1 (165635788-165636021) |
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1-150, gnl|rheMac2|chr1 (184372824-184372591) |
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1-150, gnl|rn3|chr13 (64726075-64725872) |
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1-150, gnl|tetNig1|chr1 (15405862-15405652) |
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1-150, gnl|xenTro1|scaffold_160 (1460509-1460279) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
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1-150, gnl|bosTau2|chr16 (49018440-49018589) |
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1-150, gnl|canFam2|chr7 (22388618-22388854) |
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1-150, gnl|danRer3|chr20 (42683949-42684172) |
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1-150, gnl|dasNov1|scaffold_784 (100180-99959) |
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1-150, gnl|echTel1|scaffold_311559 (60956-61193) |
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1-150, gnl|fr1|chrUn (175394658-175394454) |
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1-150, gnl|galGal2|chr8 (9880232-9880021) |
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1-150, gnl|hg17|chr1 (183054433-183054666) |
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1-150, gnl|Hg17|chr1 (183054621-183054472) |
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1-150, gnl|loxAfr1|scaffold_19259 (9848-9613) |
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1-150, gnl|mm7|chr1 (150341916-150341713) |
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1-150, gnl|Mm7|chr1 (150341742-150341891) |
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1-150, gnl|monDom2|scaffold_16 (40758565-40758788) |
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1-150, gnl|oryCun1|scaffold_202902 (54547-54770) |
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1-150, gnl|panTro1|chr1 (165635788-165636021) |
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1-150, gnl|rheMac2|chr1 (184372824-184372591) |
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1-150, gnl|rn3|chr13 (64726075-64725872) |
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1-150, gnl|tetNig1|chr1 (15405862-15405652) |
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1-150, gnl|xenTro1|scaffold_160 (1460509-1460279) |
